CmUC04G075900 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G075900
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	thylakoid membrane protein TERC, chloroplastic
Location	CmU531Chr04: 22403413 .. 22407407 (+)
RNA-Seq Expression	CmUC04G075900
Synteny	CmUC04G075900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACATCTTTCGACGATAATTCAGCGTCACGTTGAAGTGGAAACGAAACTCCGAAGAAAACAATGGATAAGATATAGACATAGTGAGGCGTCAGTCTCCGGTATTCGAAGAGGTGGAAATGGCTTCCATCATCCACAACGGCGTTCAAATTTCTTCAAAGCTTGATTCTCCACGGCCTAAGGCTTCATCACAGCCTCATTTTCATCCTCGAACATGGATTGAGACCGTCCACAATCACCTTCCTCAATTTTCCCCAGGTTCAACTCTTCCCTTTCTATCTACTGTGAAGATTGGCGTAATCTCATTGAGTATTGTATGAATCCGTATTCCTAGTTATCCTCAATTGCCATCCTGCTCCGCGCTCTTTGATTCGATGCAGCAGTCGAATAGAAAGGGAAGGCGATCCATCTCCTGCAGGTCAGTGAGAGTTTCGTCTAATTTTTGTTATTTTGAAGATTAATGGTGATATTCGTGTATGCCTGTTTCAATTAGACATGGATAAGAGTGAGGCATTTTTCAATTGTGGTTACTTGTTCATCATATGGTAACAGTGAGACGAATTTGCAGAAGCCAATAGGACGTCTTCCGTCCCAGGCACGATCGAGGGGCTGGAAAGTAAAGTTTCTTCCGTTAGAAATGTTGCTCTATGTGTAAGCACTTGCTGATCTTTAATTTGTGAATGTAATCAAACAGTATGGCTGTTCGATAATTGATTTGGTATTGTATATTCTCTGTTATAGATTGCTACTGCAGTGGCGTTTGGTATCGGGGTGGGTTTGAAAGATGGAGTTGGCAAGGCCTCTGAATTTTTTGCTGGGTATGTTGCTTACGACATCTCCACCAAACACACGATTTCTTCAGTTGTCTGTCGTTTTTTTTCCTTTAACGAATTGGTTGATACGATGACAAATGGAATTGGGCCTAATCAAATGCGATTTATAGTTTCATTGGTAATTAGGAAATTAGAAAATGTCGTATAAAGAACCATTATAAAGAATGTAACTTGCACTGCTAAGTCACATACTTTTTTGGTTACGTTGGTACTTGGATTCATGACTTACGCTTAGCTCTTAAATAACAAAAAATTTGAGCTATTCCTTACATGAAAACGTAGAAGGAGAACTATGTAGATTAACAAGGACAAGAGGTTACTTACACATTTCTTACTGTGTTACGAGCTTAGTTTCGAACTTTGTATTACGGTCAGATCATAGATGTGAGCGTGGCCTGCCTTTTTGGAAGAATTGACTTTTCTGCACAACAGGAGTTAACTCCTTTTCATTCTTTCCTACTTCTTCTAAATAATTTTTTTTTTAAAAAAAAAAGATGTTTAACATTAATTCTTGATGTGGAGATTTTGGAAGATGCTTAACTCATGTTTGTTGAACTCTTCACTTTATTATACTTCTTTATGCTTTGTTAATGTCTGATTTTATGACATTCTTCAGGTATCTTCTGGAGCAAAGTTTGTCAGTTGACAATCTTTTTGTCTTTGTTTTGATTTTCAAGTACTTTAAAGTGCCAATGGAGTATCAGGTGCTAACTTTGTGCAAAGCTATGACTAAATTGCTACTTAGCATGCAAACTATTAGTTTTACTTTGCTGTACAGAATAATATAATGTCTATGCATGTTGATGATTTGTTGGTTTTGAAATATAGAATCGGGTGCTTACATATGGTATTTCTGGTGCAATTGTCTTTCGTCTAACTATCATACTTCTGGGAACAGCCACTCTGCAGGTAACTTCTCTTCCTGTTGTATTCCGCTTTACTCATATGGTCTATCTGAGAATTGTTTCTACTGTTTCAGAGATTTGAGGCAGTAAACCTGCTTCTGGCTGCTATACTTCTATTCTCATCATTTCAGGTTGGTTGTTCTAAGCTTTTTACTCTTAAATTTCCATATGTTTTCTGATGATCAATCATTAGGATTTTTTAGCTTAAATGTATCATGGATTCTGCAGCTGTTTGCCAGTGAAGAAGAGGATGACGGTGACCTATCAGACAACTTTGTAGTAAAGATATGCCAAAAATTAATCCCTGTGACAGGTATTTTTAAATTAAATTCATATTTTTTTTGTGTTGGAGTATGTACTCATGAAAAGTGCTTGATCATCTGTACTATTTTCTTAACACTCTTATTTGTTGAGAGGAAGTAGAGTCTATACTCCTTTGCACCCTTTGTATATATGGTGCAAGAAAAAGGGTGAGCCTCATCAATATGATGATTGACTTCCTTAAATTACAGTCCATATTTGCCTAGGCAACTCGTGAAGAAACTACTAAGAGGATTTATCTAAAAACTAGAGAGGTGAAAGACAATTTTCATGCAGTAGAATAGAATTTTTTCTGAGGAAGCTGTTTTATAGTTATGTGAGGAGAACACCGAACAGTGTATGAAAGTGTTACTTTTCCAGTCTGTTTGGTTGGCTTACTCTCAAATGGGATTTTTGTCTCTTTTTATGCTCATGGTTAGATCTTACTTACCCTGTTATATTGTTGCAGCAAACTATGATGGGAATCGCTTTTTTACACTCCAGGAGGGTGTGAAGAAAGTAAGTTATGATGGACTAGGGTCAACCGAATGAAACTGTACTGTAGCTTTTTAGAATATTATTGATCATGTCGAGCATGTTGAGCATAAAATAAGGGAGACCTTTTCTTATTAACAAGCATGTTACATTATTCTATTGGAAGCTTGTAAATCTATCATGTAAACTTAATTTTGACATGATTTCTAACAGGTCTCGAACATTTTGGACAGGCAACACCTTTACTTCTCACCGTAGCTGTAATTGAGCTCAGTGATATAGCATTTGCTGTATGTTATTCATGACTGAATCATGTTATTATGCATCAGGATGTTTTTTACTTCATTTTTCTAGTTTATGGAATCGCTCACTCAACGTTTCTTTTCTTGAACTTGGTGCTAGGTTGACTCAATACCTGCTGTTTTTGGTGTCACAAGGGACCCTTTCATAGTGTTTACGTCTAATTTTTTTGCCATTTTAGGTAATTCCGTGCCCTCCCTGTGAATTGACCTCTTGGATAGCTGGATCCTAACAACTATGAAATTGATTTTTTTTCTTTATGTCTTCACATCTCTTCAATCGTTAAATAATTTGCCAACAAACTCGCCCAATATTAAACATGGGAACAGTTGTGGTTAATGGGGTGAAAGAGTTTTCATAGCAGTTCTTTAATCAAAAGCTCTAACGTGGAAGATGTGTTGGGATAATATATTTATTGTCCATTTGTTTCCTTTAACAAGTTGAGAGCAACTTTGGTTTGTATGCTTCTGTGAATTAAAGTTTCCTGAGATGCACAATAACCACCATTTTGGTGTCTTACAGGTTTGAGGTCCCTATTCATTCTTGTAGCTAATGGGATGTCAGAATTGGAGTACTTACAGGTAAAATTTTAGACGTAAAACAGATCAAGAGCAAGTCAAGTTGCTATCATTGTTGTATCTCACTCCTTTCGTTTTTTCCCTAGTGGCGTTGGTGTACCACAAGTCTAAAATTGTCCTTTGTGAAAGACTGAAAGTCTTAAAGCATGTACAAATAAAATGCTGAAATTGAAAAGTCAGTTTGAAAATATTTTTGGTGGTGGTATAATTGTGGACAAATACTATGGCCCTACTGTGCAAGCTTTTTTGGTGTTTTCCAAGTCTTAAAGCGCTCAGTTCTTGCTACTATAAACGTCCACTAAAGGAATTTTCCTCCATATTTTCAATCTTCTTCCAGCCTTCTATTGGCGTTGTTTTAGCATTTATTGGGAGTAAGATGATCCTGGATTTCTTTGGTGAGCACTCCTCCGTGAATTCGAAAGTTCAAATCAGTTATGAAGCGTATATGCATTTTAAAATTCGAGGATTCATTGATCTCTCTCTTCATGCAGGATTCCATGTCTCAACTGAGGCATCTCTTGGATTTGTCGCAATAAGTCTGAGCACTGGAGTTATGTTGAGTCTACTGAAGAAGGCTGATTGA

mRNA sequence

ATTGACATCTTTCGACGATAATTCAGCGTCACGTTGAAGTGGAAACGAAACTCCGAAGAAAACAATGGATAAGATATAGACATAGTGAGGCGTCAGTCTCCGGTATTCGAAGAGGTGGAAATGGCTTCCATCATCCACAACGGCGTTCAAATTTCTTCAAAGCTTGATTCTCCACGGCCTAAGGCTTCATCACAGCCTCATTTTCATCCTCGAACATGGATTGAGACCGTCCACAATCACCTTCCTCAATTTTCCCCAGTTATCCTCAATTGCCATCCTGCTCCGCGCTCTTTGATTCGATGCAGCAGTCGAATAGAAAGGGAAGGCGATCCATCTCCTGCAGAAGCCAATAGGACGTCTTCCGTCCCAGGCACGATCGAGGGGCTGGAAAGTAAAGTTTCTTCCGTTAGAAATGTTGCTCTATGTATTGCTACTGCAGTGGCGTTTGGTATCGGGGTGGGTTTGAAAGATGGAGTTGGCAAGGCCTCTGAATTTTTTGCTGGGTATCTTCTGGAGCAAAGTTTGTCAGTTGACAATCTTTTTGTCTTTGTTTTGATTTTCAAGTACTTTAAAGTGCCAATGGAGTATCAGAATCGGGTGCTTACATATGGTATTTCTGGTGCAATTGTCTTTCGTCTAACTATCATACTTCTGGGAACAGCCACTCTGCAGAGATTTGAGGCAGTAAACCTGCTTCTGGCTGCTATACTTCTATTCTCATCATTTCAGCTGTTTGCCAGTGAAGAAGAGGATGACGGTGACCTATCAGACAACTTTGTAGTAAAGATATGCCAAAAATTAATCCCTGTGACAGGTCTCGAACATTTTGGACAGGCAACACCTTTACTTCTCACCGTAGCTGTAATTGAGCTCAGTGATATAGCATTTGCTGTTGACTCAATACCTGCTGTTTTTGGTGTCACAAGGGACCCTTTCATAGTGTTTACGTCTAATTTTTTTGCCATTTTAGGTTTGAGGTCCCTATTCATTCTTGTAGCTAATGGGATGTCAGAATTGGAGTACTTACAGCCTTCTATTGGCGTTGTTTTAGCATTTATTGGGAGTAAGATGATCCTGGATTTCTTTGGTGAGCACTCCTCCGTGAATTCGAAAGTTCAAATCAGTTATGAAGCGTATATGCATTTTAAAATTCGAGGATTCATTGATCTCTCTCTTCATGCAGGATTCCATGTCTCAACTGAGGCATCTCTTGGATTTGTCGCAATAAGTCTGAGCACTGGAGTTATGTTGAGTCTACTGAAGAAGGCTGATTGA

Coding sequence (CDS)

ATGGCTTCCATCATCCACAACGGCGTTCAAATTTCTTCAAAGCTTGATTCTCCACGGCCTAAGGCTTCATCACAGCCTCATTTTCATCCTCGAACATGGATTGAGACCGTCCACAATCACCTTCCTCAATTTTCCCCAGTTATCCTCAATTGCCATCCTGCTCCGCGCTCTTTGATTCGATGCAGCAGTCGAATAGAAAGGGAAGGCGATCCATCTCCTGCAGAAGCCAATAGGACGTCTTCCGTCCCAGGCACGATCGAGGGGCTGGAAAGTAAAGTTTCTTCCGTTAGAAATGTTGCTCTATGTATTGCTACTGCAGTGGCGTTTGGTATCGGGGTGGGTTTGAAAGATGGAGTTGGCAAGGCCTCTGAATTTTTTGCTGGGTATCTTCTGGAGCAAAGTTTGTCAGTTGACAATCTTTTTGTCTTTGTTTTGATTTTCAAGTACTTTAAAGTGCCAATGGAGTATCAGAATCGGGTGCTTACATATGGTATTTCTGGTGCAATTGTCTTTCGTCTAACTATCATACTTCTGGGAACAGCCACTCTGCAGAGATTTGAGGCAGTAAACCTGCTTCTGGCTGCTATACTTCTATTCTCATCATTTCAGCTGTTTGCCAGTGAAGAAGAGGATGACGGTGACCTATCAGACAACTTTGTAGTAAAGATATGCCAAAAATTAATCCCTGTGACAGGTCTCGAACATTTTGGACAGGCAACACCTTTACTTCTCACCGTAGCTGTAATTGAGCTCAGTGATATAGCATTTGCTGTTGACTCAATACCTGCTGTTTTTGGTGTCACAAGGGACCCTTTCATAGTGTTTACGTCTAATTTTTTTGCCATTTTAGGTTTGAGGTCCCTATTCATTCTTGTAGCTAATGGGATGTCAGAATTGGAGTACTTACAGCCTTCTATTGGCGTTGTTTTAGCATTTATTGGGAGTAAGATGATCCTGGATTTCTTTGGTGAGCACTCCTCCGTGAATTCGAAAGTTCAAATCAGTTATGAAGCGTATATGCATTTTAAAATTCGAGGATTCATTGATCTCTCTCTTCATGCAGGATTCCATGTCTCAACTGAGGCATCTCTTGGATTTGTCGCAATAAGTCTGAGCACTGGAGTTATGTTGAGTCTACTGAAGAAGGCTGATTGA

Protein sequence

MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIRCSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGLEHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFILVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDLSLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD

Homology

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BLAST of CmUC04G075900 vs. NCBI nr
Match: XP_038883780.1 (thylakoid membrane protein TERC, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 599.7 bits (1545), Expect = 1.7e-167
Identity = 332/394 (84.26%), Postives = 338/394 (85.79%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHNGVQISSKLDSP  K SSQ HFHPRTWIETVHNH+PQFSPVILNCHPAPRSLIR
Sbjct: 1   MASIIHNGVQISSKLDSPWLKVSSQLHFHPRTWIETVHNHVPQFSPVILNCHPAPRSLIR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           C SRIEREGDPS AEANRTSSVPGTIEGLESKVSS+RNVALC+ATAVAFGIGVGLKDG G
Sbjct: 61  CGSRIEREGDPSTAEANRTSSVPGTIEGLESKVSSLRNVALCVATAVAFGIGVGLKDGPG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT
Sbjct: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTG-------- 240
           ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVK CQKLIPVT         
Sbjct: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKTCQKLIPVTANYDGNRFF 240

Query: 241 --LEHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
              E   +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI
Sbjct: 241 TLQEGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           LVA+GMSELEYLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LVADGMSELEYLQPSIGVVLAFIGSKMILDFF---------------------------- 360

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHV TEASLGFVAISLSTGV+LSLLKKAD
Sbjct: 361 ----GFHVPTEASLGFVAISLSTGVLLSLLKKAD 362

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BLAST of CmUC04G075900 vs. NCBI nr
Match: XP_008447276.1 (PREDICTED: thylakoid membrane protein TERC, chloroplastic [Cucumis melo] >XP_008447284.1 PREDICTED: thylakoid membrane protein TERC, chloroplastic [Cucumis melo] >KAA0047314.1 thylakoid membrane protein TERC [Cucumis melo var. makuwa])

HSP 1 Score: 589.3 bits (1518), Expect = 2.3e-164
Identity = 324/394 (82.23%), Postives = 334/394 (84.77%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           M SIIHNGVQISSKLDSP PK SS PHFHPRTWIETVHNH+PQFS VILNCHP+PR L+R
Sbjct: 1   MTSIIHNGVQISSKLDSPWPKVSSHPHFHPRTWIETVHNHVPQFSSVILNCHPSPRPLVR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           CSSRIEREGDPS AEANRTSSV GTIEG ESKVSS+RNVALC+ATAVAFGIGVGLKDGVG
Sbjct: 61  CSSRIEREGDPSTAEANRTSSVRGTIEGPESKVSSIRNVALCVATAVAFGIGVGLKDGVG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVP EYQNRVLTYGISGAI FRLTIILLGT
Sbjct: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIFFRLTIILLGT 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL------- 240
           ATLQRFEAVNLLLAAILLFSSFQLFAS+EEDDGDLSDNFVVK CQKLIPVT         
Sbjct: 181 ATLQRFEAVNLLLAAILLFSSFQLFASDEEDDGDLSDNFVVKTCQKLIPVTATYDGNRFF 240

Query: 241 ---EHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
              E   +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVF+SNFFAILGLRSLFI
Sbjct: 241 TLQEGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNFFAILGLRSLFI 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           LVA+GMSELEYLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LVADGMSELEYLQPSIGVVLAFIGSKMILDFF---------------------------- 360

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHV TEASLGFVAISLSTGV+LSLLKKAD
Sbjct: 361 ----GFHVPTEASLGFVAISLSTGVLLSLLKKAD 362

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BLAST of CmUC04G075900 vs. NCBI nr
Match: XP_004142102.1 (thylakoid membrane protein TERC, chloroplastic [Cucumis sativus] >KGN54196.1 hypothetical protein Csa_018172 [Cucumis sativus])

HSP 1 Score: 580.5 bits (1495), Expect = 1.1e-161
Identity = 319/394 (80.96%), Postives = 331/394 (84.01%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHNG+QISSKLDSP PK SS  HFHPR W+E VHNH+PQFSPVILNC P+PRSL+R
Sbjct: 1   MASIIHNGLQISSKLDSPWPKVSSHLHFHPRAWVEAVHNHVPQFSPVILNCRPSPRSLVR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           CSSRIEREGDPS AEANRTSSV GTIEG ESKVSS+RNVALC+ATAVAFGIGVGLKDGVG
Sbjct: 61  CSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATAVAFGIGVGLKDGVG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVP EYQNRVLTYGISGAIVFRLTIILLG 
Sbjct: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIVFRLTIILLGA 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL------- 240
           ATLQRFEAVNLLLAAILLFSSFQLFAS EEDDGDLSDNFVVK CQ+LIPVT         
Sbjct: 181 ATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQLIPVTATYDGDRFF 240

Query: 241 ---EHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
              E   +ATPLLLT+AVIELSDIAFAVDSIPAVFGVTRDPFIV TSNFFAILGLRSLFI
Sbjct: 241 TLQEGVKKATPLLLTIAVIELSDIAFAVDSIPAVFGVTRDPFIVITSNFFAILGLRSLFI 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           LVA+GMSELEYLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LVADGMSELEYLQPSIGVVLAFIGSKMILDFF---------------------------- 360

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHV TEASLGFVAISLSTGV+LSLLKKAD
Sbjct: 361 ----GFHVPTEASLGFVAISLSTGVLLSLLKKAD 362

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BLAST of CmUC04G075900 vs. NCBI nr
Match: XP_022143939.1 (thylakoid membrane protein TERC, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 554.3 bits (1427), Expect = 8.3e-154
Identity = 310/405 (76.54%), Postives = 328/405 (80.99%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHN +QISSK DSP PK SSQ HF PRTWIE VHNH+P+FSPV+LNCH APRSLIR
Sbjct: 1   MASIIHNAIQISSKPDSPWPKVSSQLHFQPRTWIEFVHNHIPRFSPVVLNCHRAPRSLIR 60

Query: 61  CSSRIEREGDPSPAEA-----------NRTSSVPGTIEGLESKVSSVRNVALCIATAVAF 120
           C SRIE+EGDPS AEA           NRT SV GT EG ESKVSSVRNVALC+ATAVAF
Sbjct: 61  CGSRIEKEGDPSTAEANRSQSSGEKEYNRTYSVSGTTEGFESKVSSVRNVALCVATAVAF 120

Query: 121 GIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAI 180
           GIG+GLKDG GKASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP+EYQNRVLTYGISGAI
Sbjct: 121 GIGLGLKDGPGKASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIEYQNRVLTYGISGAI 180

Query: 181 VFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIP 240
           VFRLTIILLGTATLQRFEAVNLLLAAILL+SSFQLF SEEEDD DLSDNFVVK+CQKLIP
Sbjct: 181 VFRLTIILLGTATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDLSDNFVVKMCQKLIP 240

Query: 241 VTGL---EHF-------GQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNF 300
           VT      HF        +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNF
Sbjct: 241 VTANYDGNHFFTLQDGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNF 300

Query: 301 FAILGLRSLFILVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAY 360
           FAILGLRSLF+L+A+GMSEL+YLQPSIGVVLAFIGSKMILDFF                 
Sbjct: 301 FAILGLRSLFVLIADGMSELKYLQPSIGVVLAFIGSKMILDFF----------------- 360

Query: 361 MHFKIRGFIDLSLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
                          GFHVSTEASLGFVA SL TGV+LSLLK +D
Sbjct: 361 ---------------GFHVSTEASLGFVATSLGTGVLLSLLKNSD 373

[Close]

BLAST of CmUC04G075900 vs. NCBI nr
Match: XP_022143941.1 (thylakoid membrane protein TERC, chloroplastic isoform X3 [Momordica charantia])

HSP 1 Score: 544.3 bits (1401), Expect = 8.6e-151
Identity = 303/394 (76.90%), Postives = 321/394 (81.47%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHN +QISSK DSP PK SSQ HF PRTWIE VHNH+P+FSPV+LNCH APRSLIR
Sbjct: 1   MASIIHNAIQISSKPDSPWPKVSSQLHFQPRTWIEFVHNHIPRFSPVVLNCHRAPRSLIR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           C SRIE+EGDPS A         GT EG ESKVSSVRNVALC+ATAVAFGIG+GLKDG G
Sbjct: 61  CGSRIEKEGDPSTA---------GTTEGFESKVSSVRNVALCVATAVAFGIGLGLKDGPG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP+EYQNRVLTYGISGAIVFRLTIILLGT
Sbjct: 121 KASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIEYQNRVLTYGISGAIVFRLTIILLGT 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL---EHF- 240
           ATLQRFEAVNLLLAAILL+SSFQLF SEEEDD DLSDNFVVK+CQKLIPVT      HF 
Sbjct: 181 ATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDLSDNFVVKMCQKLIPVTANYDGNHFF 240

Query: 241 ------GQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
                  +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLF+
Sbjct: 241 TLQDGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFV 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           L+A+GMSEL+YLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LIADGMSELKYLQPSIGVVLAFIGSKMILDFF---------------------------- 353

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHVSTEASLGFVA SL TGV+LSLLK +D
Sbjct: 361 ----GFHVSTEASLGFVATSLGTGVLLSLLKNSD 353

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BLAST of CmUC04G075900 vs. ExPASy Swiss-Prot
Match: F4JZG9 (Thylakoid membrane protein TERC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TERC PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.6e-102
Identity = 235/416 (56.49%), Postives = 280/416 (67.31%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSP-RPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSL- 60
           +AS+IH+G+   +K D          P F  R W ++  + L   +P + +   A R L 
Sbjct: 3   LASVIHHGILPPAKSDRIFLTIPVFPPDFRARGWTKSPFSLL--INPSLASA--ANRRLS 62

Query: 61  ----IRCSSRIEREGD--------PSPAEANRTSSVPGT---------IEGLESKVSSVR 120
               I CS  I++E +        P   + N T+S   +          +  E+  +S +
Sbjct: 63  HLPPIACSRGIDQEDEEKESRELLPHKNDENATTSRSSSSVDSGGLKDYQQEETYKTSFK 122

Query: 121 NVALCIATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQ 180
            VALC+ TAVAFGIG+GLK+GVGKASEFFAGY+LEQSLSVDNLFVFVL+FKYFKVP+ YQ
Sbjct: 123 TVALCVGTAVAFGIGIGLKEGVGKASEFFAGYILEQSLSVDNLFVFVLVFKYFKVPLMYQ 182

Query: 181 NRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSD 240
           N+VLTYGI+GAIVFR T+ILLGTATLQ+FEAVNLLLAA+LL+SSF+LFAS EEDD DLSD
Sbjct: 183 NKVLTYGIAGAIVFRFTLILLGTATLQKFEAVNLLLAAVLLYSSFKLFAS-EEDDTDLSD 242

Query: 241 NFVVKICQKLIPVTG--------LEHFG--QATPLLLTVAVIELSDIAFAVDSIPAVFGV 300
           NF+VK CQ+ IPVT          +H G  +ATPLLLTVAVIELSDIAFAVDSIPAVFGV
Sbjct: 243 NFIVKTCQRFIPVTSSYDGNRFFTKHDGILKATPLLLTVAVIELSDIAFAVDSIPAVFGV 302

Query: 301 TRDPFIVFTSNFFAILGLRSLFILVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSS 360
           TRDPFIV TSN FAILGLRSL+ L++ GM ELEYLQPSI VVL FIG KMILDFF     
Sbjct: 303 TRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVLGFIGVKMILDFF----- 362

Query: 361 VNSKVQISYEAYMHFKIRGFIDLSLHAGFHVSTEASLGFVAISLSTGVMLSLLKKA 384
                                      GFH+STEASLG VA+SLSTGV+LSL  K+
Sbjct: 363 ---------------------------GFHISTEASLGVVALSLSTGVLLSLTNKS 381

[Close]

BLAST of CmUC04G075900 vs. ExPASy Swiss-Prot
Match: P96554 (Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus OX=34 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-41
Identity = 100/233 (42.92%), Postives = 144/233 (61.80%), Query Frame = 0


Query: 100 ALCIATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNR 159
           AL ++ A+ FG GV  K G     +F  GYL+E+SLSVDN+FVFV+IF   ++P  YQ+R
Sbjct: 48  ALWVSLALVFGAGVWWKFGPEPGLQFITGYLIEKSLSVDNIFVFVVIFSALRIPALYQHR 107

Query: 160 VLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNF 219
           VL +GI  A+  R  +I  G A L RF  +  +    L+ +  +LF    ++D    +  
Sbjct: 108 VLFWGILSALALRAIMIFAGVAMLARFHWLIYVFGGFLIITGVKLFLQRNKEDNP-EEGA 167

Query: 220 VVKICQKLIPVT---GLEHF-------GQATPLLLTVAVIELSDIAFAVDSIPAVFGVTR 279
           ++++ ++ IP T      HF         ATPLL+ + ++E SDI FA+DSIPA+F VT 
Sbjct: 168 LMRLARRTIPSTPNFDGHHFFTVENGRKLATPLLMALLLVEASDILFALDSIPAIFAVTT 227

Query: 280 DPFIVFTSNFFAILGLRSLFILVANGMSELEYLQPSIGVVLAFIGSKM-ILDF 322
           DPFIVFTSN FAILGLRS+F ++A  + +  YL+  +  VL F+G+KM I+DF
Sbjct: 228 DPFIVFTSNIFAILGLRSMFFMLAGAVEKFSYLKVGLSAVLVFVGTKMAIIDF 279

[Close]

BLAST of CmUC04G075900 vs. ExPASy Swiss-Prot
Match: Q8XAJ0 (Putative membrane-bound redox modulator Alx OS=Escherichia coli O157:H7 OX=83334 GN=alx PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37
Identity = 93/213 (43.66%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           +A  F  GYL+E+SL+VDN+FV++++F YF VP   Q RVL YG+ GAIV R  +I  G+
Sbjct: 75  QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL---EHFG 240
             + +F+ +  +  A LLF+  ++ A   ED+  + D  +V+  +  + +T     EHF 
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKM-ALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFF 194

Query: 241 -------QATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
                   ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV TSN FAILGLR+++ 
Sbjct: 195 VRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYF 254

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKM-ILDFF 323
           L+A        L+  + V+L FIG KM I+DF+
Sbjct: 255 LLAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286

[Close]

BLAST of CmUC04G075900 vs. ExPASy Swiss-Prot
Match: Q8FDE1 (Putative membrane-bound redox modulator Alx OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=alx PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37
Identity = 93/213 (43.66%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           +A  F  GYL+E+SL+VDN+FV++++F YF VP   Q RVL YG+ GAIV R  +I  G+
Sbjct: 75  QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL---EHFG 240
             + +F+ +  +  A LLF+  ++ A   ED+  + D  +V+  +  + +T     EHF 
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKM-ALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFF 194

Query: 241 -------QATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
                   ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV TSN FAILGLR+++ 
Sbjct: 195 VRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYF 254

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKM-ILDFF 323
           L+A        L+  + V+L FIG KM I+DF+
Sbjct: 255 LLAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286

[Close]

BLAST of CmUC04G075900 vs. ExPASy Swiss-Prot
Match: P42601 (Putative membrane-bound redox modulator Alx OS=Escherichia coli (strain K12) OX=83333 GN=alx PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37
Identity = 93/213 (43.66%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           +A  F  GYL+E+SL+VDN+FV++++F YF VP   Q RVL YG+ GAIV R  +I  G+
Sbjct: 75  QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL---EHFG 240
             + +F+ +  +  A LLF+  ++ A   ED+  + D  +V+  +  + +T     EHF 
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKM-ALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFF 194

Query: 241 -------QATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
                   ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV TSN FAILGLR+++ 
Sbjct: 195 VRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYF 254

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKM-ILDFF 323
           L+A        L+  + V+L FIG KM I+DF+
Sbjct: 255 LLAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286

[Close]

BLAST of CmUC04G075900 vs. ExPASy TrEMBL
Match: A0A1S3BGI3 (thylakoid membrane protein TERC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489749 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.1e-164
Identity = 324/394 (82.23%), Postives = 334/394 (84.77%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           M SIIHNGVQISSKLDSP PK SS PHFHPRTWIETVHNH+PQFS VILNCHP+PR L+R
Sbjct: 1   MTSIIHNGVQISSKLDSPWPKVSSHPHFHPRTWIETVHNHVPQFSSVILNCHPSPRPLVR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           CSSRIEREGDPS AEANRTSSV GTIEG ESKVSS+RNVALC+ATAVAFGIGVGLKDGVG
Sbjct: 61  CSSRIEREGDPSTAEANRTSSVRGTIEGPESKVSSIRNVALCVATAVAFGIGVGLKDGVG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVP EYQNRVLTYGISGAI FRLTIILLGT
Sbjct: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIFFRLTIILLGT 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL------- 240
           ATLQRFEAVNLLLAAILLFSSFQLFAS+EEDDGDLSDNFVVK CQKLIPVT         
Sbjct: 181 ATLQRFEAVNLLLAAILLFSSFQLFASDEEDDGDLSDNFVVKTCQKLIPVTATYDGNRFF 240

Query: 241 ---EHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
              E   +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVF+SNFFAILGLRSLFI
Sbjct: 241 TLQEGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNFFAILGLRSLFI 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           LVA+GMSELEYLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LVADGMSELEYLQPSIGVVLAFIGSKMILDFF---------------------------- 360

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHV TEASLGFVAISLSTGV+LSLLKKAD
Sbjct: 361 ----GFHVPTEASLGFVAISLSTGVLLSLLKKAD 362

[Close]

BLAST of CmUC04G075900 vs. ExPASy TrEMBL
Match: A0A5A7TWH1 (Thylakoid membrane protein TERC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001310 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.1e-164
Identity = 324/394 (82.23%), Postives = 334/394 (84.77%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           M SIIHNGVQISSKLDSP PK SS PHFHPRTWIETVHNH+PQFS VILNCHP+PR L+R
Sbjct: 1   MTSIIHNGVQISSKLDSPWPKVSSHPHFHPRTWIETVHNHVPQFSSVILNCHPSPRPLVR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           CSSRIEREGDPS AEANRTSSV GTIEG ESKVSS+RNVALC+ATAVAFGIGVGLKDGVG
Sbjct: 61  CSSRIEREGDPSTAEANRTSSVRGTIEGPESKVSSIRNVALCVATAVAFGIGVGLKDGVG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVP EYQNRVLTYGISGAI FRLTIILLGT
Sbjct: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIFFRLTIILLGT 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL------- 240
           ATLQRFEAVNLLLAAILLFSSFQLFAS+EEDDGDLSDNFVVK CQKLIPVT         
Sbjct: 181 ATLQRFEAVNLLLAAILLFSSFQLFASDEEDDGDLSDNFVVKTCQKLIPVTATYDGNRFF 240

Query: 241 ---EHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
              E   +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVF+SNFFAILGLRSLFI
Sbjct: 241 TLQEGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNFFAILGLRSLFI 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           LVA+GMSELEYLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LVADGMSELEYLQPSIGVVLAFIGSKMILDFF---------------------------- 360

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHV TEASLGFVAISLSTGV+LSLLKKAD
Sbjct: 361 ----GFHVPTEASLGFVAISLSTGVLLSLLKKAD 362

[Close]

BLAST of CmUC04G075900 vs. ExPASy TrEMBL
Match: A0A0A0L220 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293060 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 5.2e-162
Identity = 319/394 (80.96%), Postives = 331/394 (84.01%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHNG+QISSKLDSP PK SS  HFHPR W+E VHNH+PQFSPVILNC P+PRSL+R
Sbjct: 1   MASIIHNGLQISSKLDSPWPKVSSHLHFHPRAWVEAVHNHVPQFSPVILNCRPSPRSLVR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           CSSRIEREGDPS AEANRTSSV GTIEG ESKVSS+RNVALC+ATAVAFGIGVGLKDGVG
Sbjct: 61  CSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATAVAFGIGVGLKDGVG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVP EYQNRVLTYGISGAIVFRLTIILLG 
Sbjct: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIVFRLTIILLGA 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL------- 240
           ATLQRFEAVNLLLAAILLFSSFQLFAS EEDDGDLSDNFVVK CQ+LIPVT         
Sbjct: 181 ATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQLIPVTATYDGDRFF 240

Query: 241 ---EHFGQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
              E   +ATPLLLT+AVIELSDIAFAVDSIPAVFGVTRDPFIV TSNFFAILGLRSLFI
Sbjct: 241 TLQEGVKKATPLLLTIAVIELSDIAFAVDSIPAVFGVTRDPFIVITSNFFAILGLRSLFI 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           LVA+GMSELEYLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LVADGMSELEYLQPSIGVVLAFIGSKMILDFF---------------------------- 360

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHV TEASLGFVAISLSTGV+LSLLKKAD
Sbjct: 361 ----GFHVPTEASLGFVAISLSTGVLLSLLKKAD 362

[Close]

BLAST of CmUC04G075900 vs. ExPASy TrEMBL
Match: A0A6J1CQT8 (thylakoid membrane protein TERC, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013731 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 4.0e-154
Identity = 310/405 (76.54%), Postives = 328/405 (80.99%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHN +QISSK DSP PK SSQ HF PRTWIE VHNH+P+FSPV+LNCH APRSLIR
Sbjct: 1   MASIIHNAIQISSKPDSPWPKVSSQLHFQPRTWIEFVHNHIPRFSPVVLNCHRAPRSLIR 60

Query: 61  CSSRIEREGDPSPAEA-----------NRTSSVPGTIEGLESKVSSVRNVALCIATAVAF 120
           C SRIE+EGDPS AEA           NRT SV GT EG ESKVSSVRNVALC+ATAVAF
Sbjct: 61  CGSRIEKEGDPSTAEANRSQSSGEKEYNRTYSVSGTTEGFESKVSSVRNVALCVATAVAF 120

Query: 121 GIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAI 180
           GIG+GLKDG GKASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP+EYQNRVLTYGISGAI
Sbjct: 121 GIGLGLKDGPGKASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIEYQNRVLTYGISGAI 180

Query: 181 VFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIP 240
           VFRLTIILLGTATLQRFEAVNLLLAAILL+SSFQLF SEEEDD DLSDNFVVK+CQKLIP
Sbjct: 181 VFRLTIILLGTATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDLSDNFVVKMCQKLIP 240

Query: 241 VTGL---EHF-------GQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNF 300
           VT      HF        +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNF
Sbjct: 241 VTANYDGNHFFTLQDGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNF 300

Query: 301 FAILGLRSLFILVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAY 360
           FAILGLRSLF+L+A+GMSEL+YLQPSIGVVLAFIGSKMILDFF                 
Sbjct: 301 FAILGLRSLFVLIADGMSELKYLQPSIGVVLAFIGSKMILDFF----------------- 360

Query: 361 MHFKIRGFIDLSLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
                          GFHVSTEASLGFVA SL TGV+LSLLK +D
Sbjct: 361 ---------------GFHVSTEASLGFVATSLGTGVLLSLLKNSD 373

[Close]

BLAST of CmUC04G075900 vs. ExPASy TrEMBL
Match: A0A6J1CRT5 (thylakoid membrane protein TERC, chloroplastic isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013731 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 4.2e-151
Identity = 303/394 (76.90%), Postives = 321/394 (81.47%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSPRPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSLIR 60
           MASIIHN +QISSK DSP PK SSQ HF PRTWIE VHNH+P+FSPV+LNCH APRSLIR
Sbjct: 1   MASIIHNAIQISSKPDSPWPKVSSQLHFQPRTWIEFVHNHIPRFSPVVLNCHRAPRSLIR 60

Query: 61  CSSRIEREGDPSPAEANRTSSVPGTIEGLESKVSSVRNVALCIATAVAFGIGVGLKDGVG 120
           C SRIE+EGDPS A         GT EG ESKVSSVRNVALC+ATAVAFGIG+GLKDG G
Sbjct: 61  CGSRIEKEGDPSTA---------GTTEGFESKVSSVRNVALCVATAVAFGIGLGLKDGPG 120

Query: 121 KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGISGAIVFRLTIILLGT 180
           KASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP+EYQNRVLTYGISGAIVFRLTIILLGT
Sbjct: 121 KASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIEYQNRVLTYGISGAIVFRLTIILLGT 180

Query: 181 ATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKICQKLIPVTGL---EHF- 240
           ATLQRFEAVNLLLAAILL+SSFQLF SEEEDD DLSDNFVVK+CQKLIPVT      HF 
Sbjct: 181 ATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDLSDNFVVKMCQKLIPVTANYDGNHFF 240

Query: 241 ------GQATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFI 300
                  +ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLF+
Sbjct: 241 TLQDGVKKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNFFAILGLRSLFV 300

Query: 301 LVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSSVNSKVQISYEAYMHFKIRGFIDL 360
           L+A+GMSEL+YLQPSIGVVLAFIGSKMILDFF                            
Sbjct: 301 LIADGMSELKYLQPSIGVVLAFIGSKMILDFF---------------------------- 353

Query: 361 SLHAGFHVSTEASLGFVAISLSTGVMLSLLKKAD 385
               GFHVSTEASLGFVA SL TGV+LSLLK +D
Sbjct: 361 ----GFHVSTEASLGFVATSLGTGVLLSLLKNSD 353

[Close]

BLAST of CmUC04G075900 vs. TAIR 10
Match: AT5G12130.1 (integral membrane TerC family protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.9e-103
Identity = 235/416 (56.49%), Postives = 280/416 (67.31%), Query Frame = 0


Query: 1   MASIIHNGVQISSKLDSP-RPKASSQPHFHPRTWIETVHNHLPQFSPVILNCHPAPRSL- 60
           +AS+IH+G+   +K D          P F  R W ++  + L   +P + +   A R L 
Sbjct: 3   LASVIHHGILPPAKSDRIFLTIPVFPPDFRARGWTKSPFSLL--INPSLASA--ANRRLS 62

Query: 61  ----IRCSSRIEREGD--------PSPAEANRTSSVPGT---------IEGLESKVSSVR 120
               I CS  I++E +        P   + N T+S   +          +  E+  +S +
Sbjct: 63  HLPPIACSRGIDQEDEEKESRELLPHKNDENATTSRSSSSVDSGGLKDYQQEETYKTSFK 122

Query: 121 NVALCIATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQ 180
            VALC+ TAVAFGIG+GLK+GVGKASEFFAGY+LEQSLSVDNLFVFVL+FKYFKVP+ YQ
Sbjct: 123 TVALCVGTAVAFGIGIGLKEGVGKASEFFAGYILEQSLSVDNLFVFVLVFKYFKVPLMYQ 182

Query: 181 NRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSD 240
           N+VLTYGI+GAIVFR T+ILLGTATLQ+FEAVNLLLAA+LL+SSF+LFAS EEDD DLSD
Sbjct: 183 NKVLTYGIAGAIVFRFTLILLGTATLQKFEAVNLLLAAVLLYSSFKLFAS-EEDDTDLSD 242

Query: 241 NFVVKICQKLIPVTG--------LEHFG--QATPLLLTVAVIELSDIAFAVDSIPAVFGV 300
           NF+VK CQ+ IPVT          +H G  +ATPLLLTVAVIELSDIAFAVDSIPAVFGV
Sbjct: 243 NFIVKTCQRFIPVTSSYDGNRFFTKHDGILKATPLLLTVAVIELSDIAFAVDSIPAVFGV 302

Query: 301 TRDPFIVFTSNFFAILGLRSLFILVANGMSELEYLQPSIGVVLAFIGSKMILDFFGEHSS 360
           TRDPFIV TSN FAILGLRSL+ L++ GM ELEYLQPSI VVL FIG KMILDFF     
Sbjct: 303 TRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVLGFIGVKMILDFF----- 362

Query: 361 VNSKVQISYEAYMHFKIRGFIDLSLHAGFHVSTEASLGFVAISLSTGVMLSLLKKA 384
                                      GFH+STEASLG VA+SLSTGV+LSL  K+
Sbjct: 363 ---------------------------GFHISTEASLGVVALSLSTGVLLSLTNKS 381

The following BLAST results are available for this feature:

BLAST of CmUC04G075900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883780.1	1.7e-167	84.26	thylakoid membrane protein TERC, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_008447276.1	2.3e-164	82.23	PREDICTED: thylakoid membrane protein TERC, chloroplastic [Cucumis melo] >XP_008...	[more]
XP_004142102.1	1.1e-161	80.96	thylakoid membrane protein TERC, chloroplastic [Cucumis sativus] >KGN54196.1 hyp...	[more]
XP_022143939.1	8.3e-154	76.54	thylakoid membrane protein TERC, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_022143941.1	8.6e-151	76.90	thylakoid membrane protein TERC, chloroplastic isoform X3 [Momordica charantia]	[more]

BLAST of CmUC04G075900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JZG9	2.6e-102	56.49	Thylakoid membrane protein TERC, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
P96554	2.0e-41	42.92	Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus OX=34 PE=3 SV=1	[more]
Q8XAJ0	1.0e-37	43.66	Putative membrane-bound redox modulator Alx OS=Escherichia coli O157:H7 OX=83334...	[more]
Q8FDE1	1.0e-37	43.66	Putative membrane-bound redox modulator Alx OS=Escherichia coli O6:H1 (strain CF...	[more]
P42601	1.0e-37	43.66	Putative membrane-bound redox modulator Alx OS=Escherichia coli (strain K12) OX=...	[more]

BLAST of CmUC04G075900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGI3	1.1e-164	82.23	thylakoid membrane protein TERC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7TWH1	1.1e-164	82.23	Thylakoid membrane protein TERC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0L220	5.2e-162	80.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293060 PE=4 SV=1	[more]
A0A6J1CQT8	4.0e-154	76.54	thylakoid membrane protein TERC, chloroplastic isoform X1 OS=Momordica charantia...	[more]
A0A6J1CRT5	4.2e-151	76.90	thylakoid membrane protein TERC, chloroplastic isoform X3 OS=Momordica charantia...	[more]

BLAST of CmUC04G075900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12130.1	1.9e-103	56.49	integral membrane TerC family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005496	Integral membrane protein TerC	PFAM	PF03741	TerC	coord: 126..320 e-value: 3.7E-46 score: 157.1
IPR022369	Integral membrane protein TerC, riboswitch-linked	TIGRFAM	TIGR03718	TIGR03718	coord: 95..382 e-value: 3.5E-76 score: 254.5
IPR022369	Integral membrane protein TerC, riboswitch-linked	PANTHER	PTHR30238:SF0	THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTIC	coord: 87..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR30238	MEMBRANE BOUND PREDICTED REDOX MODULATOR	coord: 87..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G075900.1	CmUC04G075900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090351	seedling development
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane