CmUC04G075470 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCTGCTTGCAGCCTGCAGGTTGCCACCCCACAAATGGATGTTACTGACCTTTTAACTTGCCCACCACCACGGACGAGGATTGATGCCTGCCCATTCCTGATGAAGAATTATCGGGATACGAGATTTGCATTTGATTCTCCATCTTCCTTAATACTTTGGCAGAGTACTGTATACCTTCCTTTTTTGTCGGCACTTTGAGTTGCATTTACATTGACATAGAGCATGGAATAGACTTCTCAAAAGAAAAAGCACACCTCCATTTCATTGTTTATTACGTTTATTAATGAATAAGAAAAAGTTTTGATTAATGGGTGTTAATATTGATCAGTTGTAAGGATAAAACTGTCATTTCAATTTCATTAATTTTGTGGATTCCATCGACTTCCTTTTGTAATTTGCTCTGTTCTTTTCTATCTGTATGGAATCTGAATTCAAATTTTACTTTTATTCCAAACATTATCCTCTCCATTGCGATTTTGAATGCAATGTTATTTTATATTTCTTTTTTGTTCTTTCCAGTTGATCTTTTTCTCAAAGTTCACACTAATTTACATTTTTAATTGGTTTTTCATTCTTGGTTAATTGGATATCTCACTGTTCTGTAGCTTAATTAATTGACTGAAATTTCCATTCGCAATAGACGTTTCTCTGGCCTTCTGCTGAGTTTGTGGGCCTCTGGTGTCACTGCAGTACGAAAGTAGTCTCGTTAAGGCCTTTTCTATCGTCTCTTTTGCTCTGCCAATCAGAAAATGCTCGGAAGAAATGGCAAGTTCTCTCTCCCTCTAAATGCTTATAGGTTGTCGTGCATATACCATCTGTTTTCTAATGATTTGAATTCAATGGTTTTCATTCTTAACCTCCCCTCCTCTGCAGCCACCTCCTTTGATATTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGACTGCTAAATGCTAGAGTTGGGTTGCTGGAAAATCGAAACTTTCCTGGATCAATCTCCTTCAACACTTTGCCTACTGGATCTCCCATCTCCTTCACAGACTCTTCAGATCTTGATTCTGAGGTAGTGTTTATTGTTGTTTTTTTCCTCAAATTCTGTGTGTTCATTTCTCCTGCTTTGTTTCTGATTGGATTACAGTCAAGTGGGTCGTTCTTCCATGCTAAAAGCATCACTCTGGGTAGTCTAATTGGTGATTCTACTTCTAGCATCATGGAACTCTCGAGAAGGGGAAACACAGAAGCCAACCTAGGAGGGGACAGGAAGATCAATAACTTCAGGTTCAAGTACAAGCCATGGTTGTTTTCACTCTGCTGCAAACTGAGCACCGACGTCGTCAGCGCCACCAGAACTCACTCCCTGGCTCACTTTCTAGAAGTAGAGAGGAGGAGAACTGCCGCCACTGCCGCTGCCCGCCCCCTGCCAATTGCCGGAAGAGCCAATAATTTGTTAACCGGCTGAAACTCTGTTTTCATTAGCCAATAGCAAAGTTGGTCGTCAGCAAATAGGAAGAGGCCAAGGAGAGTGGTTAATTGATGCCAGATGGGAATGGGAATGGGGTTCTTGGTGTTGTTTTCATCCTACCTTCAGACAAATTATTAGGCTGCCACTCATAATATCGTTAGATGTGCCGGTAATGAGATGCCTTTCTGGATCTTCATCACAACTGTTTTGAGATTTTACTCTTATCTTAAGTCAGGTACTCGAGAACCCTTTACTTTTAAATTGTTTGTTACCTCTCTTTTTCTTGCATATTCGAATGGTGAATATTACTTTC ATGTCTGCTGCTTGCAGCCTGCAGGTTGCCACCCCACAAATGGATGTTACTGACCTTTTAACTTGCCCACCACCACGGACGAGGATTGATGCCTGCCCATTCCTGATGAAGAATTATCGGGATACGAGATTTGCATTTGATTCTCCATCTTCCTTAATACTTTGGCAGAGTACTCCACCTCCTTTGATATTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGACTGCTAAATGCTAGAGTTGGGTTGCTGGAAAATCGAAACTTTCCTGGATCAATCTCCTTCAACACTTTGCCTACTGGATCTCCCATCTCCTTCACAGACTCTTCAGATCTTGATTCTGAGTCAAGTGGGTCGTTCTTCCATGCTAAAAGCATCACTCTGGGTAGTCTAATTGGTGATTCTACTTCTAGCATCATGGAACTCTCGAGAAGGGGAAACACAGAAGCCAACCTAGGAGGGGACAGGAAGATCAATAACTTCAGGTTCAAGTACAAGCCATGGTTGTTTTCACTCTGCTGCAAACTGAGCACCGACGTCGTCAGCGCCACCAGAACTCACTCCCTGGCTCACTTTCTAGAAGTAGAGAGGAGGAGAACTGCCGCCACTGCCGCTGCCCGCCCCCTGCCAATTGCCGGAAGAGCCAATAATTTGTTAACCGGCTGAAACTCTGTTTTCATTAGCCAATAGCAAAGTTGGTCGTCAGCAAATAGGAAGAGGCCAAGGAGAGTGGTTAATTGATGCCAGATGGGAATGGGAATGGGGTTCTTGGTGTTGTTTTCATCCTACCTTCAGACAAATTATTAGGCTGCCACTCATAATATCGTTAGATGTGCCGGTAATGAGATGCCTTTCTGGATCTTCATCACAACTGTTTTGAGATTTTACTCTTATCTTAAGTCAGGTACTCGAGAACCCTTTACTTTTAAATTGTTTGTTACCTCTCTTTTTCTTGCATATTCGAATGGTGAATATTACTTTC ATGTCTGCTGCTTGCAGCCTGCAGGTTGCCACCCCACAAATGGATGTTACTGACCTTTTAACTTGCCCACCACCACGGACGAGGATTGATGCCTGCCCATTCCTGATGAAGAATTATCGGGATACGAGATTTGCATTTGATTCTCCATCTTCCTTAATACTTTGGCAGAGTACTCCACCTCCTTTGATATTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGACTGCTAAATGCTAGAGTTGGGTTGCTGGAAAATCGAAACTTTCCTGGATCAATCTCCTTCAACACTTTGCCTACTGGATCTCCCATCTCCTTCACAGACTCTTCAGATCTTGATTCTGAGTCAAGTGGGTCGTTCTTCCATGCTAAAAGCATCACTCTGGGTAGTCTAATTGGTGATTCTACTTCTAGCATCATGGAACTCTCGAGAAGGGGAAACACAGAAGCCAACCTAGGAGGGGACAGGAAGATCAATAACTTCAGGTTCAAGTACAAGCCATGGTTGTTTTCACTCTGCTGCAAACTGAGCACCGACGTCGTCAGCGCCACCAGAACTCACTCCCTGGCTCACTTTCTAGAAGTAGAGAGGAGGAGAACTGCCGCCACTGCCGCTGCCCGCCCCCTGCCAATTGCCGGAAGAGCCAATAATTTGTTAACCGGCTGA MSAACSLQVATPQMDVTDLLTCPPPRTRIDACPFLMKNYRDTRFAFDSPSSLILWQSTPPPLIFLSISNQPPQSQPVMAQQDDGWPLGLRLLNARVGLLENRNFPGSISFNTLPTGSPISFTDSSDLDSESSGSFFHAKSITLGSLIGDSTSSIMELSRRGNTEANLGGDRKINNFRFKYKPWLFSLCCKLSTDVVSATRTHSLAHFLEVERRRTAATAAARPLPIAGRANNLLTG Homology
BLAST of CmUC04G075470 vs. NCBI nr
Match: KAA0032638.1 (uncharacterized protein E6C27_scaffold184G00230 [Cucumis melo var. makuwa] >TYK23518.1 uncharacterized protein E5676_scaffold500G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 364.0 bits (933), Expect = 9.8e-97 Identity = 190/231 (82.25%), Postives = 205/231 (88.74%), Query Frame = 0
BLAST of CmUC04G075470 vs. NCBI nr
Match: XP_038877635.1 (uncharacterized protein LOC120069886 [Benincasa hispida]) HSP 1 Score: 290.8 bits (743), Expect = 1.1e-74 Identity = 155/182 (85.16%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of CmUC04G075470 vs. NCBI nr
Match: XP_004142071.2 (uncharacterized protein LOC101214483 [Cucumis sativus] >KAE8649527.1 hypothetical protein Csa_018070 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 2.2e-72 Identity = 149/189 (78.84%), Postives = 165/189 (87.30%), Query Frame = 0
BLAST of CmUC04G075470 vs. NCBI nr
Match: XP_016900475.1 (PREDICTED: uncharacterized protein LOC103490160 isoform X1 [Cucumis melo] >XP_016900477.1 PREDICTED: uncharacterized protein LOC103490160 isoform X1 [Cucumis melo]) HSP 1 Score: 278.9 bits (712), Expect = 4.1e-71 Identity = 147/179 (82.12%), Postives = 159/179 (88.83%), Query Frame = 0
BLAST of CmUC04G075470 vs. NCBI nr
Match: KAG6595318.1 (hypothetical protein SDJN03_11871, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 229.9 bits (585), Expect = 2.2e-56 Identity = 133/185 (71.89%), Postives = 142/185 (76.76%), Query Frame = 0
BLAST of CmUC04G075470 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04 Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0
BLAST of CmUC04G075470 vs. ExPASy TrEMBL
Match: A0A5D3DJ71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00220 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97 Identity = 190/231 (82.25%), Postives = 205/231 (88.74%), Query Frame = 0
BLAST of CmUC04G075470 vs. ExPASy TrEMBL
Match: A0A1S4DWX0 (uncharacterized protein LOC103490160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490160 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 2.0e-71 Identity = 147/179 (82.12%), Postives = 159/179 (88.83%), Query Frame = 0
BLAST of CmUC04G075470 vs. ExPASy TrEMBL
Match: A0A0A0KX74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295490 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.4e-64 Identity = 133/163 (81.60%), Postives = 146/163 (89.57%), Query Frame = 0
BLAST of CmUC04G075470 vs. ExPASy TrEMBL
Match: A0A6J1I9M4 (uncharacterized protein LOC111471292 OS=Cucurbita maxima OX=3661 GN=LOC111471292 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 6.9e-56 Identity = 134/191 (70.16%), Postives = 143/191 (74.87%), Query Frame = 0
BLAST of CmUC04G075470 vs. ExPASy TrEMBL
Match: A0A6J1CR51 (uncharacterized protein LOC111013562 OS=Momordica charantia OX=3673 GN=LOC111013562 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 3.4e-55 Identity = 132/190 (69.47%), Postives = 144/190 (75.79%), Query Frame = 0
BLAST of CmUC04G075470 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 1.4e-24 Identity = 79/175 (45.14%), Postives = 99/175 (56.57%), Query Frame = 0
BLAST of CmUC04G075470 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05 Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|