CmUC04G074000 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G074000
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr04: 20348155 .. 20351294 (-)
RNA-Seq Expression	CmUC04G074000
Synteny	CmUC04G074000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGTTTGGATTTGAAGAAGATGAGTCAGTTCGTGGCGGCCATGCAAAAGGAGAGAGTGAAATTGAAGCGTGGCGCCGTTGAAGAACCCCAAATTCTGCTTCTCTCATCTGCAGCTGCCACCTCCCTCTGCTATTGCTCTGTTTCTTGTCTTTTCAGCTTTCTCTAATGGATACACTTCATTTCTCACATCTAACAATTTTCTGGCTTTTATATTTTTAAATTTGTAACGATTTATGTAGTTGGTTTGTGAAAAGTAATCTCATCATATTGATGGATAATTTTTATTATGTAATGATTCCCTCTTTTATAATTTATAAACAAATCCTTAAAAATATTCATCAAAATCTATATCCGTCCACAACAAATTTTATTAAATCTTGAATAGTAATTTTTATTTTACAAATAATAGAGTATATGAACTAAATTAATCTTTATTAAAATTTAATCACAAAAATTGTTATAATTTTGAAACTATAAAAACTAAATTGTTATAAATTTCTAATCATAAAGAGCAAATCTTTACAAAGTAAAGTTCGTGAACTAAATTGTTATTTTGTTAGAGACAAAAATTTAGTTTTAACTTATTTTTATTGTTATTTGGTTTGATTACAATTTTTTCCTTTTTTTGGATTAAGGTTTGATCACAAATTTATTTGATTGATTTTAGGAGTATGTGGTTGGTGTAGGAATTTGATCACCTAAGAAAATGTTGTCAATTTTGTTTTATCATCCTAAGATGTGTTTGGAATACCTTCACAAGTATTTAATTTAAAAAATAAGTCATTTTCAAAAGAAATACAAATGCTTAGCAACCGCTCAAAATTGATTTTGAAAGTCACTAGTGTTTTTATTTTAAACAATCTTCCTATCAAAAGTGTTTAAATAAAAATAAATTTCTGAAAAATATTTATTGTTTAAGTTTGAAAAGGCTATCAGATGAATGGTCACTCAAATACGGATGTTAAATAGAAAGCACAGACAAACACTATAATAACCAACAAAACCAACAGGAAGCAAAAAAGAATTTTCACACAAGAGTTGATAACCTAATTCAGCGATAAACCACCTACGTTTGGGGGTAGTGTGCCCAATAAAGATAATTCACTAATATTGAATAGTTAAACGTTTACAACAAAGTACTCATCTGTAAAGTTTCAATTTCTACAGTGACTCTAGCACCTAGGCTCCTCCTAAGACCGAGAATTCCTTTTCTTCAACGATGCCTTAGGCTCCCCCTAAGACAGAAATAATCTTCACATTCTTGAACGATTCAAACAACGGATACGCAGAATGGAATAAAGTGGGCAAAGATCAAATCACAAATCGGCACCCAAAACAAAAACTCTTTCTCACTAAGAACAAAATGCGGCTAGACCCTAGAATAACAATTCTTCAAAATATTCAATAATGGTGGCCAACCCTAGCAAGGGCACAAAATCTTGAATAAATAATTTCTTTAGAAAAGTAAAACATCCCAAAAAGAATTCGGTGGGCCATAAGGAGGGAAATAATCTAGAATATAAAATTTGCTGAATTTTCCAAATAAGGAAAGTTTGGATAGGAGAATTGCGCTTGTTATAACAATAGCTGAGGCAACTTATGTGACATCATGCAAACGGCCAGACCCATAATACCCTGCCTTAAATAAATAAATAAGGAAAGAATTTCCTAGAAAAATATTTTCCTTTTTTTGTCACAATAAGATCCACCATAAAAAGGAAAATATCGATCAATATAATTATACTGAGATTTCCCAGATACCACCATAAGCTGCCTTAGAAAAATATAAAGACAGTCAACAAATCTCCAACAAAGTTAATGCAAACATGCTCTTAGTTTTATTTCGGAATTGCATCTAAAAAATGAGACTGTGTACATTGGCATGGTGTCATCAGTCCCCAAATACACTTTTATGCTAAATTGTACGAAAAATTTTCTAGTACAACGTACTCACTTTGTTCACACCATAATTTTTTGTTAACGTCAGGTGGGTTCCACTCTATTTTTAAAACGCATGTTGATGTGGCACACAATAAATAGAAGGGAAATTACTAGAAACTTTCTAAGTTATATAGTTATACCACAATTTTGTATTAACTTTGTAAACGTAAATATTGTTTAATATGCACATGAAACTTTCTTCTCCAATTTGCATAGGGCTAGCATTAGCCTAGGGCTTTCAATTGCTCAACGTGTTTGACTCGCATCTTTGTTGTGAATCTTAAATATCGATTGTTGAATAGTTGTGGCTAATCAAGGATGCCAAATTTTCAAATATAATCTTTATATTGATTTAGGTGTACTAATTTCACTCCTAACATGTTATGGATTATAGATTTTAAGTTTGTGTATCTAAACAAGTCTTTGAATTTTCATTTTTTTAATAAAAAAAATCATTAATTTATTAGACGGACTATTGATGAATTAGATTTCTTTAAAACGTAAAATTTTTAATCTATATCTAATAGATTCATTCATTTAAAAATTTTCAAAAGTTTAGACTCAAGATTTATTAGATATTTTTAAAATTCAAAAGACCAATTAAAAACAAAATTTAAACTTCAAAAACCTTTAAGCACTTCAACGACTAAGAACTTGTTAATCATAGATTTCTGTTGGACTTTGATTCTAATTCTAAATAAATGGAAATGGGCCAAAGGATTCTGGGCTGGGCCCATTGTATGTTGGCAATACTTCCCGCCCAATAGTTTGCCTTTGTCTATCCAAGTGTTTTGGAGGCCACGTATATCAATTGACCAATTGGATAAGCTGTCAACAGCTATTGCTTGTATGAACGTGACTCCTTATTCCGTTGACTTTATTATTCAACGTTGACGTTATATCTCTATATTACATTTGTACGGCCAAAAAGAACCAAGTTCTCGTTCCCTTTCACTTGTTTATATACTACGTTGTATAGTTCCCTCATATCATTGTATCTTGCCATTTCAGTTGTAAACATGTCAAACCCACGACACAATAATGCCCCCGAATCGATCACATCGTCTCCTCCTCCTGCTTCCGACTTCGAAACAAAGTCGAGAACAGTGCCGGTCGGAATCGAAGCGGCTGCAATAGTAAAGAGAAAGAAGAGGGACGACATGTTGAAGAAATGGTCTCTAGGTTTAAGATGA

mRNA sequence

ATGGGTTTGTTTGGATTTGAAGAAGATGAGTCAGTTCGTGGCGGCCATGCAAAAGGAGAGAGTGAAATTGAAGCGTGGCGCCTTGTAAACATGTCAAACCCACGACACAATAATGCCCCCGAATCGATCACATCGTCTCCTCCTCCTGCTTCCGACTTCGAAACAAAGTCGAGAACAGTGCCGGTCGGAATCGAAGCGGCTGCAATAGTAAAGAGAAAGAAGAGGGACGACATGTTGAAGAAATGGTCTCTAGGTTTAAGATGA

Coding sequence (CDS)

ATGGGTTTGTTTGGATTTGAAGAAGATGAGTCAGTTCGTGGCGGCCATGCAAAAGGAGAGAGTGAAATTGAAGCGTGGCGCCTTGTAAACATGTCAAACCCACGACACAATAATGCCCCCGAATCGATCACATCGTCTCCTCCTCCTGCTTCCGACTTCGAAACAAAGTCGAGAACAGTGCCGGTCGGAATCGAAGCGGCTGCAATAGTAAAGAGAAAGAAGAGGGACGACATGTTGAAGAAATGGTCTCTAGGTTTAAGATGA

Protein sequence

MGLFGFEEDESVRGGHAKGESEIEAWRLVNMSNPRHNNAPESITSSPPPASDFETKSRTVPVGIEAAAIVKRKKRDDMLKKWSLGLR

Homology

[Close]

BLAST of CmUC04G074000 vs. NCBI nr
Match: XP_038882342.1 (CASP-like protein 4B1 [Benincasa hispida])

HSP 1 Score: 70.9 bits (172), Expect = 6.3e-09
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 31 MSNPRHNNAPESITSSPPPASDFETKSRTVPVGIEAAAIVKRKKRDDMLKKWSLGLR 88
          MSNPR NNAPE+ITS+ P A D ET+S   PVG EAAAIVKR KR+D+LKK SL LR
Sbjct: 1  MSNPRDNNAPETITSA-PLAPDVETRSTVPPVGTEAAAIVKRMKREDILKKLSLSLR 56

The following BLAST results are available for this feature:

BLAST of CmUC04G074000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882342.1	6.3e-09	70.18	CASP-like protein 4B1 [Benincasa hispida]	[more]

BLAST of CmUC04G074000 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC04G074000 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC04G074000 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G074000.1	CmUC04G074000.1	mRNA