CmUC04G072820 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G072820
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	binding partner of ACD11 1-like
Location	CmU531Chr04: 18095039 .. 18101277 (-)
RNA-Seq Expression	CmUC04G072820
Synteny	CmUC04G072820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTATCAATAGAGTTTAGATAAAAATGACTTTTTAGAAAAATAATCTTTTCCCTAGTTAATTCAAACAGATCCTAAAATTGGACATTTGTAAGTATAAGTACCAAAACCTAATAAACTAAAAAAAAATGAAAATGAAAATGAAAATGAAAGGGGACAAATTTGGAAAGTGAAATTTCCTGACATACTAATTTCCTTGATTTTTATCTGTCTCACGCTTTGTCCGGTGATACTTCTTTCAAATTGCCTCCAAGCTCCAACTTGTACAACTTCCTCTCTCTCTCTTCAAGAAATTCGCCAAATTCTTCGATAATTAGCAATGCAGGTAACAAATCCTTCAATTTCCACTACTTTGTTTCAACTTGTACTCTCTGATTTCCGCAATCAACTTCAATTTTGCCCTTGTTTTTTATCTTGATTTCTTCTGCTCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGGTGAGTGATTAACTCTGTGTTACTGTGAACAGAATTGCAAAAAGTGGTAAAGAGAAGATGTTCATGATTGATTGATTATGATTCCCTTTTCTATGCGGCTTGTTTAGTTTTAGGTTTCCTACTGTTTGGCTTCCGAGCAAATGTAACTATTAAGCATGAGGGTTGTAATTGTTATAGCTGACAAGTAATTAAGGAATCCTGGTTGAGTTTTAGCAAAAATATTAGGAGTGCAGTTGTTCCATTGGAGAAATTCAAGGTAGTGATGAGTTCCAAGCACTAGAAAAGGAGTCTTTGCCTCTAGTTTCAAATTAAAACACTTTAAGCTTGAGTGAGCTAACTCTAGTTAAATTTCCTTTTGTATTATCTAGTTTAAGAGTGAACTTAAAGGGTATGAGTAGTATAAAAGTTTTGAGAGAGTGCTCATATAATTGGGATCGGGGAGATAGTTGTTTTGTGATTGTAATAAATTTTCACATGGTGGATTTCTTGCAGTGGGTTGTAGTTTTTTTCTCCGGTTTAGAGTTTTCCATGTTAATTTTCGTGTTCCTAGTTTTATTGATTTCTTTTAATTTCTTTATTATTTCACTGCTTATTTCTGCGGTAATAGTGAGAGGTTTTTCCCAACATCCCTCTTGAGAAGATAAGAAGAGTCTGATGGATTGCAACTGATTATTATCTTTACTTTACCATTGGCATGCAGTGTAGAATAAGCAATTGCTGGATTGTTATTCTAATTTATTATTGTTGGTGCAGTGAACAAGGGGGATCCAAGGCTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGTATTTCATTATCTCAATTCTCTTTCATATCCATGAAGTCTTAGTCAGTTATCGTGATGTATTTGTTGAACTTGTGATTTTACAATGAATGTCCAAGAGCGTCATGTTGAAGTTTGGTTCATGTGGGTCTAAATTTGGCTGTGTTTGCCTTCTTATTTAGGCTATGTTGGTTCTTAGTGTCCAGTTAGTTCTATATCCTCTCTACTTTTCTTTCCTTCATTTTCTTGTAATTAATTTTGATTGAATTGAAAGTGATGGATGAGTAGAATCTCGGTTTTTTTTTTCCTTTCTTCTTCTTAATGAAGATACATTTTTTCAAAAGAAGATTTTCTAGTCATAACCTCAAACATAACAGGAGAAACTTCTTTATAGCTGTAATGTACGATCTTTAAGTAGAAGCTACCCTGTTTTTGCATTCTGTCTTTCTGATCGCCACACTACTCTTTCTAATGATAATATAAACCAGAGATAAGTTGTCAAACTAATTTTAAAAGCGGCATGCTTTTTTTTCTTTCTAGTTTTCCTAGCATTAATTATGAGTCCATAATTTTGGAGCCAAAAACAACTCAAGGAAAGCAAGGATGGAAAGAGAAAAAAAGAAAAAGGAAGAAAAAAGAGACGAGAGTAATGGTTGAACTTGAAAGTGAAACTATTAAACTGAACTTTATTTAACAAAACAAATGCCTTGCTTTTACTTTTTGTTAGGAATAAAAGCATTAGTGAGAAGTAGTACTAAATGGACATGTTTCTAGAAAAAGAAGGAAGCTAATACCTTTTCTTTGCGGGATCATTTCTCTACGCAATAATGGGATTATTTGATCTTTTCATCACACAATACTGGAAATATACTTTTTCTTCTTCATATTTGGCTGATGCCATAAGCTACTATAAACATTTTCTATTATTTATTTATTTGTTATTTAGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGTACTATTCTTATGTTTGAATATGTTTTGAGGCCCGTCTTTCAATATTTTTAATTTACTATGTTTGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTTGTATTGAGGTAAATGTGTTGACTCCACTCTATGAATATGAAGTATTTGAGTAGCAGTTGTTTTTCACTTTGATGTACTATTAATGAAAAACCAAGGCTGGGGAGTTTCATCAGATTGAAAAGTTTAGGTTATGTTTCTTGTTTTCTGTCTTTAGATTTTCTTAAATTGATGTAGGTGGATGAAAAGTAAAACCTACATTTAATGCATATCGTCATAAACCTCACTGAAAACCTCCCACTACTATCGCATAAATGAGCAGAAAAATAACTGATAAATTAAAAGAAAGCAATCAGACTAGGAATATAAAAATTAACATGAAAAAATTCCAAACCGAAAAAAAAACAGCGGACCGAAAAATTCTACTATGTGAAAAATTATTACAATCACAAAAAATAATTCTCCTGAACCCCAATTACAAGAGCACTCTTTCAAAACATTATACCACTCACACAACTGAGTCAACTAGTGTACCAAACTTAAAATGCTTTTAAAGGCATAGGCTTCTTTTATAGTGCTTGGAGCCCATCACTTTCTTCAATCTTTTAGACGTGGGACAACTACACTTCTAATATTTTACCAAAACCCAACACTCACCACACTTACTGAAACTATGGTGAATAACTGGTGAAATAACAGTTTCACACTTCTAGTTTTCATGTAGATCTTGATTTCCTGTCTTTATTTAACTATATGAGTGGATGGTGAGGCATCCTTTCTTTGTTCCGACCTTAAATCTTTTTGTGTTTACAGGATTCTGCAAGCCAACCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGATGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGAATCGTCATTCTTAAGCAACTTTTACTTCCCTTCCTCCTGCTATCTTCAAATTTTAGAACTTGAATATTCTCCACTCCTAGGAAGAAAGCAGAAAATTAGAGGTGCTTGGGCGCTGAGTTGGTTACTATAGTCGATGGTTATTATAACATGTAGGTTATAATAGTTTATGTTTGGGCGTAGACTATTTTAGTCTAGGTAATAATATTTTGTGTTTAAGGTGCAGATTATTTTAGTCTGAGTAAGAAATAGTAAACACTGTTATAGAGAGGGAAAGAGGATGAGTAGGAGATAGTAAACACTCTAACAAAGAGAAATTTGAAATAGTATTACTGTAGTTAAGTTGTAGGTTATACTTGTTGGACATACCAACTATATATTATAATTGGAGCCCAAATATGGAGTGGGCTAATAACCCACTCAAACCATATGAAATTGGGGCAGAAACAACCCTTCAGGAGGTGTTTGGGACGCTGAGTTGGTTATGTATAGTCAATGACTATTGTGGGTTATGATAGTCTGTAGATCATAATAGTTTGTGGTTGGGGTGCAAACTATTTTAGTTTGGATAATAATAGTCTATGTTTAGGGTGTAGGCTATTTTAGTCTGGGTAAGGAATAATAAACATTATAACAAAGAGGGAGAGAAAGGATGAGTAGGAAATGGGAAATACTGTAACAAAGAGGGATTTGAAATAGTAAGCCTGTAGTTAATTGTAGGTTATAATGGTTGGATAGCATGTATGACTCATTCTTGATGTTCGTATTGCATGATTGAGATTCCTCCGTTCATATCACACCAACTATTATAATTGGAGCCTAAACATGGAGTGGGCTATAATAGACCACTCTACCCACTTGAAGTTGGAGGCCCAAACAACCACTTATTTTTCTTGAACAGCTTCCAAAAACAACTCCCTAGTGTTTCAACTTCTTGAGAACTTTAGATCGATATAGTTGTATATTTCTGTTGTCCAAATAAATTAGAATGGTTCTACCATTCATTTTGAATAAAAGCAGTTATGACAATAGACGGAAGTGAATTAATTGTTTCACTCTATCTTGGCGTTGAACAGGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAGCTTAACTTCAAAGGTGCTTTTATGAAACCATTTTCTATGGCGACATAAAAGTCAGGATTCTTCCGAAAATTGCTTTGCTGTGAGTAACTTAAACAACTTTTGTCATGTTCAAAATCACTCCGAAACACATCTTTAATCACTCAAAATCAATTCAATGCTTAATCTTACACTTTAAATGCAATTTTCATAATATTGAAATTGATTTTGAATGATTAAAAGCAATTTTGGAGTTATTTAAAAATGACCAAAATGATTTTAACAATTTTAGAATCTCTTCCAAACATACTATAGGAACAATTTTAGGAACTACAGTTTTTGTAAATTAGTTACTCAAATCTATTTTTCTAGTTTTTTGTTTTATGGATTAGCCAATACCATGCCCAAAAATGAATTTTTGCCAAAAGAACCTAGGCTGTTGGGAGCCTATAAGAAAAACACAAGTAATTTTTTGAGAATGAAAAAACACAAGTAATTAATACCAAGAAGTATAATTTAAAATCAACATTTTGATGAGAGATTAAGCAAAATCCGAATAGTTTCCAAAAGAGAGAAATCTCTCTAAAACCTTGTTTCACTCGTGTCTAAAAGCTTCTTCCAAACAACAAAGTTTGGCTACCTGTTTGGATTGGTTGTTTAAGTGCTTAAAATGTATTTGTAAGTGCGAAAAAAATTAGTAATTTGAAAGTCAATTCAAATAGATTTTCAAAGACTTACAGAATTAAAAAACAGGAAAAATAGCCAATGAAAAAAGTAACTAACTAAGATCTCATTTGGTAACGACTTTGTTTTCAGCTTTTTAAATTTAGGTTTGTTTCCTCACAATTTTTCTATTATTATTTTCACCTATCTCAAAGAAACACTCTAACATCTGATCAAATTCGAAAAATGAAAACTACTTGTGAAAATTACTTTTTAGTTTTCAAAACTAGCTTGTTTTTTTAAAACACAACTAGAAAGTGGTAACAAAGCATAGGAACTTAGAGTGGTAGTGATGTTTATTGTTTATAGACTTCATTTTCAGAAATCAAATGGTCATCAGATGAGGCATAAAACGAACAATTAACGAAATTAATCTTTGCAATCCTGGAATTTACCCTCTACACCAAACATGCAGGAACCCCCAGTTGTTGCCTAACCTTAAAACTTAGGCTTCAAGAAAGTCACTTGCCTTGGCTACTTGTATTTTCAGTGGGGGATTGAAATGAGTTTCTTCAATTCTATTTCTTCAGGTTATTTCTTTTTCCTGAGGACGGTGCTCTATTATTATTATTTATTATTATTAGTATCATTTTTTATATTGTTCATATTCTTTAATTACAAGGGGGGTTTGGCTGATGACAATTATGTATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACTCTTAATTATTTGTTTAGGAGTATATCAAAGTTTGTGGCTCAGCTTGCTTCTTGCTGTCA

mRNA sequence

TTTCTATCAATAGAGTTTAGATAAAAATGACTTTTTAGAAAAATAATCTTTTCCCTAGTTAATTCAAACAGATCCTAAAATTGGACATTTGTAAGTATAAGTACCAAAACCTAATAAACTAAAAAAAAATGAAAATGAAAATGAAAATGAAAGGGGACAAATTTGGAAAGTGAAATTTCCTGACATACTAATTTCCTTGATTTTTATCTGTCTCACGCTTTGTCCGGTGATACTTCTTTCAAATTGCCTCCAAGCTCCAACTTGTACAACTTCCTCTCTCTCTCTTCAAGAAATTCGCCAAATTCTTCGATAATTAGCAATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGTGAACAAGGGGGATCCAAGGCTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTTGTATTGAGGATTCTGCAAGCCAACCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGATGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAACCTTAAAACTTAGGCTTCAAGAAAGTCACTTGCCTTGGCTACTTGTATTTTCAGTGGGGGATTGAAATGAGTTTCTTCAATTCTATTTCTTCAGGTTATTTCTTTTTCCTGAGGACGGTGCTCTATTATTATTATTTATTATTATTAGTATCATTTTTTATATTGTTCATATTCTTTAATTACAAGGGGGGTTTGGCTGATGACAATTATGTATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACTCTTAATTATTTGTTTAGGAGTATATCAAAGTTTGTGGCTCAGCTTGCTTCTTGCTGTCA

Coding sequence (CDS)

ATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGTGAACAAGGGGGATCCAAGGCTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTTGTATTGAGGATTCTGCAAGCCAACCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGATGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAA

Protein sequence

MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA

Homology

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BLAST of CmUC04G072820 vs. NCBI nr
Match: XP_038881171.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 480.7 bits (1236), Expect = 8.2e-132
Identity = 254/271 (93.73%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVDQIVSIS AENHVPR+EMQEVRVVDNAACLTPTENNFP  EDSASQPSSGK
Sbjct: 61  LLLSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTENNFPSTEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+LTSKE  VVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKESSVVA 271

[Close]

BLAST of CmUC04G072820 vs. NCBI nr
Match: XP_004151849.1 (binding partner of ACD11 1 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 3.1e-131
Identity = 251/271 (92.62%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+EMQEVRV DNAACLTPTENN P IEDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CmUC04G072820 vs. NCBI nr
Match: KAE8652335.1 (hypothetical protein Csa_022102 [Cucumis sativus])

HSP 1 Score: 477.6 bits (1228), Expect = 7.0e-131
Identity = 250/271 (92.25%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           +QSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIA
Sbjct: 147 LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 206

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+EMQEVRV DNAACLTPTENN P IEDSASQPSSGK
Sbjct: 207 LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 266

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 267 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 326

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 327 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 386

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Sbjct: 387 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 417

[Close]

BLAST of CmUC04G072820 vs. NCBI nr
Match: XP_008462804.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa] >TYK00958.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 474.6 bits (1220), Expect = 5.9e-130
Identity = 249/271 (91.88%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+E+QEVRV DNAACLTPTENN P  EDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CmUC04G072820 vs. NCBI nr
Match: XP_038881170.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 469.9 bits (1208), Expect = 1.5e-128
Identity = 254/288 (88.19%), Postives = 261/288 (90.62%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLL-----------------SGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTE 120
           LLL                 SGATIVDQIVSIS AENHVPR+EMQEVRVVDNAACLTPTE
Sbjct: 61  LLLSVFHYLDSLSYPRSQLSSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTE 120

Query: 121 NNFPCIEDSASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASA 180
           NNFP  EDSASQPSSGKMYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASA
Sbjct: 121 NNFPSTEDSASQPSSGKMYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASA 180

Query: 181 KVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTS 240
           KVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQNLHVSDKTMAAIFAAERKLNDTGSAVKTS
Sbjct: 181 KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTS 240

Query: 241 KYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           KYVTAG AWLNGAFGKVAKAGQAAGTKTREKFHLAMS+LTSKE  VVA
Sbjct: 241 KYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESSVVA 288

[Close]

BLAST of CmUC04G072820 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.6e-48
Identity = 109/254 (42.91%), Postives = 163/254 (64.17%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           M SQ R+V+V ++S  AT+ +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           +LLSGA+I DQ V I  A N+ P                       P    + +Q S  +
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
             V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT 
Sbjct: 121 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G S+VNEK+K++DQN  V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V
Sbjct: 181 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 228

Query: 241 AKAGQAAGTKTREK 255
           A+A    G KT+EK
Sbjct: 241 AQAAGEVGQKTKEK 228

[Close]

BLAST of CmUC04G072820 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.2e-04
Identity = 55/248 (22.18%), Postives = 101/248 (40.73%), Query Frame = 0


Query: 8   VQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGAT 67
           V V ++S   T+++I +FFSF G++ +I  + + G ++ A + F  P A + ALLL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTE-KSGETQTAKIQFERPSATKTALLLQDAL 64

Query: 68  IVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVNRAQ 127
           +    + I+  +                AA  T         +  A    + +       
Sbjct: 65  LGQNKIQITSEDG--------------GAASTTD--------QGGAGGDQAARQEDKPRS 124

Query: 128 EVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNE 187
            +++ +L++G  +    + K+   D+ + +++          K  G+ E    G+  VNE
Sbjct: 125 AIISELLSRGYHLSDVTLEKSIQLDQSYGVSS----------KFKGILESALSGVRSVNE 184

Query: 188 KVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAA 247
           +    ++   V +K     FA   KLN T S V T  +    TA           AG +A
Sbjct: 185 RYHVTEKANEVDNK-----FAISDKLNRTSSLVSTYFHKALETA-----------AGTSA 203

Query: 248 GTKTREKF 256
           G K +  +
Sbjct: 245 GQKVQNAY 203

[Close]

BLAST of CmUC04G072820 vs. ExPASy TrEMBL
Match: A0A0A0LNE8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131
Identity = 251/271 (92.62%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+EMQEVRV DNAACLTPTENN P IEDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CmUC04G072820 vs. ExPASy TrEMBL
Match: A0A5D3BPG7 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001350 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.9e-130
Identity = 249/271 (91.88%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+E+QEVRV DNAACLTPTENN P  EDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CmUC04G072820 vs. ExPASy TrEMBL
Match: A0A1S3CIA3 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.9e-130
Identity = 249/271 (91.88%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+REIHEFFSFSGEIEHIEIQCEQG SK AFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+E+QEVRV DNAACLTPTENN P  EDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CmUC04G072820 vs. ExPASy TrEMBL
Match: A0A6J1DJX5 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111021797 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.9e-128
Identity = 246/271 (90.77%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQS+TRTVQV HVSDLAT+REIHEFFSFSGEIEHIEIQCE G SK AFVTFRDPKALEIA
Sbjct: 1   MQSRTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVDQIVSISPAENHVP++E+QEVRVVDNAACLT TENN P  EDSASQPS G+
Sbjct: 61  LLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-TENNLPSNEDSASQPSGGR 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKHRLTASAS KVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAG+KTREKFHLAMS+LTSKEPPVVA
Sbjct: 241 AKAGQAAGSKTREKFHLAMSNLTSKEPPVVA 270

[Close]

BLAST of CmUC04G072820 vs. ExPASy TrEMBL
Match: A0A6J1IKN1 (binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 243/271 (89.67%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLAT+REIHEFFSFSGEIEH+EIQCEQG SK AFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           LLLSGATIVDQIVSISPAEN+VPR+EMQEVR VDNAA LTPTENNFP IEDSASQPSSG+
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD++VGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+G AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAMSSLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLAMS+LTSK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of CmUC04G072820 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 351.3 bits (900), Expect = 7.0e-97
Identity = 187/265 (70.57%), Postives = 226/265 (85.28%), Query Frame = 0


Query: 5   TRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLS 64
           TR+VQV +VSDLAT+REIHEFFSFSG+IEHIEIQ E G S+ AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 65  GATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVN 124
           GATIVDQIV+I+ AEN+V R+E QEVR++DNA  L   E+     +   +   + + YV+
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQEST---TQTKTNMDGNSRAYVS 123

Query: 125 RAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSV 184
           +AQ+VVATVLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFDKRVGLTEKL+VG+S 
Sbjct: 124 KAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISA 183

Query: 185 VNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAG 244
           VNEKVKS+DQ L VSDKTMAAIFAAERKLNDTGSAVK+S+YVTAG AW +GAF KVA+ G
Sbjct: 184 VNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVG 243

Query: 245 QAAGTKTREKFHLAMSSLTSKEPPV 270
           Q AG+KT+EKF+LA+S+++SK+ P+
Sbjct: 244 QVAGSKTKEKFNLAVSNMSSKDTPI 265

[Close]

BLAST of CmUC04G072820 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-52
Identity = 115/252 (45.63%), Postives = 165/252 (65.48%), Query Frame = 0


Query: 7   TVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT R++ EFFSFSG+I ++E Q E   +K A+VTF+D +  E A+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVNRA 126
           TIVD  V +S A ++    E          A L P        +DS   P +G   + +A
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEA--------LASLEP--------KDSNKSPKAGDSVLRKA 124

Query: 127 QEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVN 186
           ++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFDK++G T+K+  G  VV 
Sbjct: 125 EDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVG 184

Query: 187 EKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQA 246
           EKV+ +DQ   VS+KT +AI AAE+ +++ GSA+  ++YV  G  W+ GAF KVAKA + 
Sbjct: 185 EKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEE 240

Query: 247 AGTKTREKFHLA 259
            G K +EK  +A
Sbjct: 245 VGQKAKEKVGMA 240

[Close]

BLAST of CmUC04G072820 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50
Identity = 109/264 (41.29%), Postives = 174/264 (65.91%), Query Frame = 0


Query: 7   TVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT+R++ EFFSFSG+I ++E Q E  GSK A+VTF+D +  E A+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQIVSISPAENH-VPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGKMYVNR 126
           TIVD  V+++ + ++ +P   +  +  +  +      +++ P  ED +           +
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKES-----NKSSSPTREDVS--------VFRK 124

Query: 127 AQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVV 186
           A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFDKR+G TEK+  G +VV
Sbjct: 125 AEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVV 184

Query: 187 NEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQ 246
           +EKVK +DQ   V++KT +AI AAE+ +++ GSA+  ++YV  G  W+ GAF +V+KA +
Sbjct: 185 SEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAE 244

Query: 247 AAGTKTREKFHLAMSSLTSKEPPV 270
             G K +EK  LA      K+  V
Sbjct: 245 EVGQKAKEKVGLAEEEEEEKKKVV 255

[Close]

BLAST of CmUC04G072820 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-49
Identity = 109/254 (42.91%), Postives = 163/254 (64.17%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           M SQ R+V+V ++S  AT+ +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           +LLSGA+I DQ V I  A N+ P                       P    + +Q S  +
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
             V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT 
Sbjct: 121 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G S+VNEK+K++DQN  V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V
Sbjct: 181 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 228

Query: 241 AKAGQAAGTKTREK 255
           A+A    G KT+EK
Sbjct: 241 AQAAGEVGQKTKEK 228

[Close]

BLAST of CmUC04G072820 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-49
Identity = 109/254 (42.91%), Postives = 162/254 (63.78%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKREIHEFFSFSGEIEHIEIQCEQGGSKAAFVTFRDPKALEIA 60
           M SQ R+V+V ++S  AT+ +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ--SSNEHSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRVVDNAACLTPTENNFPCIEDSASQPSSGK 120
           +LLSGA+I DQ V I  A N+ P                       P    + +Q S  +
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
             V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT 
Sbjct: 121 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G S+VNEK+K++DQN  V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V
Sbjct: 181 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 229

Query: 241 AKAGQAAGTKTREK 255
           A+A    G KT+EK
Sbjct: 241 AQAAGEVGQKTKEK 229

The following BLAST results are available for this feature:

BLAST of CmUC04G072820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881171.1	8.2e-132	93.73	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_004151849.1	3.1e-131	92.62	binding partner of ACD11 1 [Cucumis sativus]	[more]
KAE8652335.1	7.0e-131	92.25	hypothetical protein Csa_022102 [Cucumis sativus]	[more]
XP_008462804.1	5.9e-130	91.88	PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding ...	[more]
XP_038881170.1	1.5e-128	88.19	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]

BLAST of CmUC04G072820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.6e-48	42.91	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	5.2e-04	22.18	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of CmUC04G072820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNE8	1.5e-131	92.62	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV...	[more]
A0A5D3BPG7	2.9e-130	91.88	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIA3	2.9e-130	91.88	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=...	[more]
A0A6J1DJX5	5.9e-128	90.77	binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111021797 PE=4 S...	[more]
A0A6J1IKN1	1.7e-127	89.67	binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1	[more]

BLAST of CmUC04G072820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	7.0e-97	70.57	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	5.3e-52	45.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.2e-50	41.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.1	1.9e-49	42.91	binding partner of acd11 1	[more]
AT5G16840.2	1.9e-49	42.91	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 1.6E-5 score: 34.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..68 e-value: 1.9E-4 score: 21.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 9.882637
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..88 e-value: 5.2E-9 score: 38.2
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 3..268
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 3..268
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G072820.1	CmUC04G072820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding