Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGCGCCAATTCCTCAAGGCCAAAAGGGGTATTCTCAAATGTGCAAAAAGTTTTCTTGGCCTAAACCAATCGAGATTTTTTCGTACATTCACTATCTAATCACTATCATCTTCTTTCGCATTCTCAAATTGTTGTCAAATCTACGTTCTTGGAAAATTCCTCTTTGCTTCTATTCGAGAAGAAGGTACTTGACGATTTAAAGTTTTGCCCTAATGTAGTTCAATGTTATGGAGAGGAAATCACAGAAGGTGAATCTGGTGAATGTGTGCATATAATTTGCTTTTGGGGTACTATTCTGGATACTTATAAGATCGTATTACCAAGTTTGGACTTAATGGCTTGTCGCAATCAAAAGTTCACCAATATACAAGAGGTATTGTATATGGAATTGCCTTTTATTCATAGTTGATTCATTGTGATATTAAGCCATAAAACATACTCTTGACAATGCCAAAGTATGGATCATGGAGGTTGTTTGATGGAAAAGATTGGTGATTTTGGATTGGTTATGGAGATGACTGATGAAGGGACCACTGATGAAGAAGATGGTATTAGAGGGACGAAGTCGTACCTAGCACCAGAATCAACAGTGATAGATAATTATCTCGATTGGCCTATTGACCATATGAACACTTGGATATGCAGTGTTGGAGATGTAACAAGAAAAAGGAGCATGGGTTCCAAACCTCTTGATCCTAATTTGCTCACCCATATTGGTTATAGTAACGAATTGCTAGAAATTCCAAACGACTATATCATCAACAACAATTGA
mRNA sequence
ATGACTGGCGCCAATTCCTCAAGGCCAAAAGGGAAGAAGGTACTTGACGATTTAAAGTTTTGCCCTAATGTAGTTCAATGTTATGGAGAGGAAATCACAGAAGGTGAATCTGGTGAATGTGTGCATATAATTTGCTTTTGGGGTACTATTCTGGATACTTATAAGATCGTATTACCAAGTTTGGACTTAATGGCTTGTCGCAATCAAAAGTTCACCAATATACAAGAGATTGGTGATTTTGGATTGGTTATGGAGATGACTGATGAAGGGACCACTGATGAAGAAGATGGTATTAGAGGGACGAAGTCGTACCTAGCACCAGAATCAACAGTGATAGATAATTATCTCGATTGGCCTATTGACCATATGAACACTTGGATATGCAGTGTTGGAGATGTAACAAGAAAAAGGAGCATGGGTTCCAAACCTCTTGATCCTAATTTGCTCACCCATATTGGTTATAGTAACGAATTGCTAGAAATTCCAAACGACTATATCATCAACAACAATTGA
Coding sequence (CDS)
ATGACTGGCGCCAATTCCTCAAGGCCAAAAGGGAAGAAGGTACTTGACGATTTAAAGTTTTGCCCTAATGTAGTTCAATGTTATGGAGAGGAAATCACAGAAGGTGAATCTGGTGAATGTGTGCATATAATTTGCTTTTGGGGTACTATTCTGGATACTTATAAGATCGTATTACCAAGTTTGGACTTAATGGCTTGTCGCAATCAAAAGTTCACCAATATACAAGAGATTGGTGATTTTGGATTGGTTATGGAGATGACTGATGAAGGGACCACTGATGAAGAAGATGGTATTAGAGGGACGAAGTCGTACCTAGCACCAGAATCAACAGTGATAGATAATTATCTCGATTGGCCTATTGACCATATGAACACTTGGATATGCAGTGTTGGAGATGTAACAAGAAAAAGGAGCATGGGTTCCAAACCTCTTGATCCTAATTTGCTCACCCATATTGGTTATAGTAACGAATTGCTAGAAATTCCAAACGACTATATCATCAACAACAATTGA
Protein sequence
MTGANSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICFWGTILDTYKIVLPSLDLMACRNQKFTNIQEIGDFGLVMEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPLDPNLLTHIGYSNELLEIPNDYIINNN
Homology
BLAST of CmUC04G071960 vs. NCBI nr
Match:
XP_038882353.1 (mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida])
HSP 1 Score: 94.4 bits (233), Expect = 1.0e-15
Identity = 58/122 (47.54%), Postives = 70/122 (57.38%), Query Frame = 0
Query: 45 CFWGTILDTYKIVLPSLDLMACRNQKFTNIQEIGDFGLVMEMTDEGTTDEEDGIRGTKSY 104
CF G + D P L ++T I DFGL M+MTD T EEDGI GT+SY
Sbjct: 138 CFGGNLYDRITKFGPK-GLPKSEVHRYTR-DIIADFGLAMKMTDVRTIGEEDGIGGTRSY 197
Query: 105 LAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPLDPNLLTHIGYSNELLEIPND 164
LAPE V +NY DW ID + +T KR GSK D +LLT+I YSNELLEIPN+
Sbjct: 198 LAPE-LVTNNYPDWSIDIWALGCVVLEMLTGKRVWGSKTCDLDLLTYICYSNELLEIPNE 256
Query: 165 YI 167
+
Sbjct: 258 LL 256
BLAST of CmUC04G071960 vs. NCBI nr
Match:
PIN00056.1 (MEKK [Handroanthus impetiginosus])
HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08
Identity = 61/207 (29.47%), Postives = 86/207 (41.55%), Query Frame = 0
Query: 4 ANSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYKIV-- 63
A+ S K ++VL +L+ CPNV++C+GEE T G +G V+ + GT+ D K
Sbjct: 65 ASGSIQKEREVLSNLRGCPNVIKCFGEETTMGVNGAMVYNLLLEYGSGGTLADRIKKFGN 124
Query: 64 --LPSLDLMACRNQ------------------KFTNI-------------QEIGDFGLVM 123
LP +++ K NI +IGDFGL
Sbjct: 125 NGLPEVEVKVFAKSILRGLNHIHEIGYVHCDLKPDNILLMPDPKRVNKFRAKIGDFGLTK 184
Query: 124 EMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPL 165
E RGT YL+PE+ V+DN D P D I + G + + G P
Sbjct: 185 RAKQSKKRKLEPYWRGTPMYLSPEA-VMDNLQDPPCD-----IWAFGCIVLEMLTGKPPW 244
BLAST of CmUC04G071960 vs. NCBI nr
Match:
CAA2935189.1 (mitogen-activated kinase kinase kinase YODA-like [Olea europaea subsp. europaea])
HSP 1 Score: 65.1 bits (157), Expect = 6.8e-07
Identity = 56/208 (26.92%), Postives = 90/208 (43.27%), Query Frame = 0
Query: 5 NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----- 64
+ S K K+VL ++K CPN+++C+GEE T GE+G + + GT+ D K
Sbjct: 59 SGSIQKEKEVLSNVKGCPNIIRCFGEEATMGENGVMAYNLLLEYGSGGTLADRIKKLGGK 118
Query: 65 ------------IVLPSL----------------DLMACRNQKFTNIQE----IGDFGLV 124
+L L +++ R+ + T + E IGDFGL
Sbjct: 119 GLSEFEVRVYARSILQGLNHIHGIGYVHCDLKPDNILLVRSGRRTRVPEFRAKIGDFGLA 178
Query: 125 MEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 165
E RGT YLAPE+ V+DN ++P D I + G + + G P
Sbjct: 179 KRAQGNKKRKLEPYWRGTPRYLAPEA-VVDNVQEFPSD-----IWAFGCIVLEMLTGKPP 238
BLAST of CmUC04G071960 vs. NCBI nr
Match:
KAE7999756.1 (hypothetical protein FH972_004157 [Carpinus fangiana])
HSP 1 Score: 64.7 bits (156), Expect = 8.8e-07
Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 0
Query: 5 NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----I 64
++S K K+VLD++K CP V+ C+GEEIT ++GE V+ + GT+ D+ +
Sbjct: 39 SASLQKEKEVLDNVKGCPYVIGCFGEEITTQDNGEMVYNLLLEYASGGTLADSIEKSDGC 98
Query: 65 VLPSLD-------------------------------LMACRNQKFTNIQEIGDFGLVME 124
LP D L+ N + +IGDFGL
Sbjct: 99 GLPEYDVKRYTKSILKGLRHIHDCGYVHCDLKPENVLLVPTINSSGNFVAKIGDFGLAKR 158
Query: 125 --MTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 165
+ + D + +RGT YLAPE TVI+ + ++ I ++G V K G P
Sbjct: 159 SAQSKKRRFDLDLYLRGTPLYLAPE-TVIER-----VQEPSSDIWALGCVVCKMLTGKSP 218
BLAST of CmUC04G071960 vs. NCBI nr
Match:
XP_020591201.1 (mitogen-activated protein kinase kinase kinase YODA-like [Phalaenopsis equestris])
HSP 1 Score: 64.3 bits (155), Expect = 1.2e-06
Identity = 52/162 (32.10%), Postives = 73/162 (45.06%), Query Frame = 0
Query: 14 VLDDLKFCPNVVQCYGEEITEGESGECVHIICFWGTILDTYKIVLPSLDLMACRNQ---- 73
VL DLK CP +++C+G +IT SGE ++ + Y + + RNQ
Sbjct: 49 VLKDLKGCPQIIRCFGHDITTDISGELMY------NLFLEYAVGGCIFGALPYRNQPSAA 108
Query: 74 KFTNIQEIGDFGLVMEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWI-- 133
F I DFGL DE T + I+GT Y+APES + Y ++ W
Sbjct: 109 MFVPSSWIADFGLATRTGDEST---KGYIKGTPLYVAPESASRNEY----NTAVDIWALG 168
Query: 134 CSVGDVTRKRSMGSKPLDPN-----LLTHIGYSNELLEIPND 165
CSV ++ R D + LL IG S+EL EIP +
Sbjct: 169 CSVSEMASGRLPWRDVEDSDYGIWPLLFRIGCSDELPEIPQE 197
BLAST of CmUC04G071960 vs. ExPASy TrEMBL
Match:
A0A2G9G411 (MEKK OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27444 PE=3 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 61/207 (29.47%), Postives = 86/207 (41.55%), Query Frame = 0
Query: 4 ANSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYKIV-- 63
A+ S K ++VL +L+ CPNV++C+GEE T G +G V+ + GT+ D K
Sbjct: 65 ASGSIQKEREVLSNLRGCPNVIKCFGEETTMGVNGAMVYNLLLEYGSGGTLADRIKKFGN 124
Query: 64 --LPSLDLMACRNQ------------------KFTNI-------------QEIGDFGLVM 123
LP +++ K NI +IGDFGL
Sbjct: 125 NGLPEVEVKVFAKSILRGLNHIHEIGYVHCDLKPDNILLMPDPKRVNKFRAKIGDFGLTK 184
Query: 124 EMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPL 165
E RGT YL+PE+ V+DN D P D I + G + + G P
Sbjct: 185 RAKQSKKRKLEPYWRGTPMYLSPEA-VMDNLQDPPCD-----IWAFGCIVLEMLTGKPPW 244
BLAST of CmUC04G071960 vs. ExPASy TrEMBL
Match:
A0A5N6QKE5 (Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004157 PE=3 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07
Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 0
Query: 5 NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----I 64
++S K K+VLD++K CP V+ C+GEEIT ++GE V+ + GT+ D+ +
Sbjct: 39 SASLQKEKEVLDNVKGCPYVIGCFGEEITTQDNGEMVYNLLLEYASGGTLADSIEKSDGC 98
Query: 65 VLPSLD-------------------------------LMACRNQKFTNIQEIGDFGLVME 124
LP D L+ N + +IGDFGL
Sbjct: 99 GLPEYDVKRYTKSILKGLRHIHDCGYVHCDLKPENVLLVPTINSSGNFVAKIGDFGLAKR 158
Query: 125 --MTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 165
+ + D + +RGT YLAPE TVI+ + ++ I ++G V K G P
Sbjct: 159 SAQSKKRRFDLDLYLRGTPLYLAPE-TVIER-----VQEPSSDIWALGCVVCKMLTGKSP 218
BLAST of CmUC04G071960 vs. ExPASy TrEMBL
Match:
A0A1Q3D664 (Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31366 PE=3 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07
Identity = 54/191 (28.27%), Postives = 80/191 (41.88%), Query Frame = 0
Query: 12 KKVLDDLKFCPNVVQCYGEEITEGESGECVH---------------------------II 71
K+VL LK P VV+CYG+E+TE G+ ++ I
Sbjct: 78 KQVLSTLKNSPFVVKCYGDEVTESGDGKVIYNILLEYCSGCSLSDHIKESKTGLPESEIK 137
Query: 72 CFWGTILDTYKIV----------LPSLDLMACRNQKFTN-IQEIGDFGLVMEMTDEGTTD 131
C+ IL + V PS L+A + + + +I DFGL +E
Sbjct: 138 CYTRDILRGLQFVHGHWLVHCDIKPSNILLASNSSSRSGLVAKISDFGLCKYENEEAVE- 197
Query: 132 EEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPLDPNLLTHIG 165
RGT+ Y+APE + DN L+ P D + ++ K G +D +LL I
Sbjct: 198 ----TRGTRRYMAPE-VIEDNILERPADIWAVGCVVLEMMSGKVVWGVSTVDDDLLMRIA 257
BLAST of CmUC04G071960 vs. ExPASy TrEMBL
Match:
A0A6I9SZL4 (mitogen-activated protein kinase kinase kinase 2-like OS=Sesamum indicum OX=4182 GN=LOC105158295 PE=3 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07
Identity = 58/207 (28.02%), Postives = 86/207 (41.55%), Query Frame = 0
Query: 5 NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTY------ 64
+ S K ++VL +LK C N+++C+GEE T G++G V+ + GT+ D
Sbjct: 66 SGSIQKEREVLSNLKGCCNIIRCFGEETTVGDNGVMVYNLLLEYGSGGTLADRIKKSGGD 125
Query: 65 -----------KIVLPSLDLM--------------------ACRNQKFTNIQEIGDFGLV 124
K +L L+ + A R +IGDFGL
Sbjct: 126 GLPEFEVRVYAKSILRGLNYIHGNGYVHCDLKPDNILLVRNAAREGSGEFRAKIGDFGLA 185
Query: 125 MEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 164
E RGT YL+PE+ VIDN D P D + ++G + + G P
Sbjct: 186 KRAKQSKKRKLEAYWRGTPMYLSPEA-VIDNVQDAPCD-----VWALGCIVLEMLTGKPP 245
BLAST of CmUC04G071960 vs. ExPASy TrEMBL
Match:
A0A5N6QIL4 (Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003483 PE=3 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 9.5e-07
Identity = 61/207 (29.47%), Postives = 89/207 (43.00%), Query Frame = 0
Query: 5 NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----I 64
++S K K+VLD+++ CP V+ C+GEEIT E GE V+ + GT+ D+ K
Sbjct: 59 SASLQKEKEVLDNVRGCPYVIDCFGEEITIQEDGEMVYNLLLEYASGGTLGDSIKKSGGC 118
Query: 65 VLPSLD-------------------------------LMACRNQKFTNIQEIGDFGLVME 124
LP D L+ N + +IGDFGL
Sbjct: 119 GLPESDVKRYTKSILKGLRHIHDCGYVHCDLKPENVLLVPTTNSSGNFVAKIGDFGLAKR 178
Query: 125 --MTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 164
+ + D + +RGT YLAPE TVI+ + P D I ++G V + G P
Sbjct: 179 SAQSKKRRFDLDLYLRGTPLYLAPE-TVIERVQELPSD-----IWALGCVVCQMLTGKSP 238
BLAST of CmUC04G071960 vs. TAIR 10
Match:
AT3G50310.1 (mitogen-activated protein kinase kinase kinase 20 )
HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 55/190 (28.95%), Postives = 80/190 (42.11%), Query Frame = 0
Query: 12 KKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYKIV----LPSLDL 71
K VLD L CP +++CYGE+ T E+GE +H + G++ K + LP +
Sbjct: 50 KSVLDSLGDCPEIIRCYGEDSTV-ENGEEMHNLLLEYASRGSLASYMKKLGGEGLPESTV 109
Query: 72 ------------------MACRNQKFTNI-------QEIGDFGLVMEMTDEGTTDEED-G 131
A + K NI +I DFGL M + + T +
Sbjct: 110 RRHTGSVLRGLRHIHAKGFAHCDIKLANILLFNDGSVKIADFGLAMRVDGDLTALRKSVE 169
Query: 132 IRGTKSYLAPESTVIDNYLDWPIDHMNTWI--CSVGDVTRKRSMGSKPLDP---NLLTHI 163
IRGT Y+APE V DN D W C+V ++ ++ S +LL I
Sbjct: 170 IRGTPLYMAPE-CVNDNEYGSAAD---VWALGCAVVEMFSGKTAWSVKEGSHFMSLLIRI 229
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882353.1 | 1.0e-15 | 47.54 | mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida] | [more] |
PIN00056.1 | 6.1e-08 | 29.47 | MEKK [Handroanthus impetiginosus] | [more] |
CAA2935189.1 | 6.8e-07 | 26.92 | mitogen-activated kinase kinase kinase YODA-like [Olea europaea subsp. europaea] | [more] |
KAE7999756.1 | 8.8e-07 | 29.33 | hypothetical protein FH972_004157 [Carpinus fangiana] | [more] |
XP_020591201.1 | 1.2e-06 | 32.10 | mitogen-activated protein kinase kinase kinase YODA-like [Phalaenopsis equestris... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2G9G411 | 3.0e-08 | 29.47 | MEKK OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27444 PE=3 SV=1 | [more] |
A0A5N6QKE5 | 4.3e-07 | 29.33 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972... | [more] |
A0A1Q3D664 | 7.3e-07 | 28.27 | Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_... | [more] |
A0A6I9SZL4 | 7.3e-07 | 28.02 | mitogen-activated protein kinase kinase kinase 2-like OS=Sesamum indicum OX=4182... | [more] |
A0A5N6QIL4 | 9.5e-07 | 29.47 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972... | [more] |
Match Name | E-value | Identity | Description | |
AT3G50310.1 | 1.1e-04 | 28.95 | mitogen-activated protein kinase kinase kinase 20 | [more] |