CmUC04G070930 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G070930
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Reverse transcriptase domain-containing protein
Location	CmU531Chr04: 12367217 .. 12370034 (+)
RNA-Seq Expression	CmUC04G070930
Synteny	CmUC04G070930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCGAAAAGCAATTCACTTATCGGAGTCGCATATGCAGTGGTTGGTAAAGCAACTTGCAGAGCTTCTTAACGTTTCAAGCGTTCGTTTTTTCTTAAAGGAAATGCGAGACACCTCAGGAGCAATGAGATTATCAAAATTCAAAAACAACATGGGGTGGAATTTGAGATGCGTGGTTTGGCCAGCTATCGGAGGTCGGTTCTTCATTCATATACCTGAAGGGTCTGCACAACAAGGATGGTCAGAGTTCTTGGAAATGCTTATTAGCTTCACCAATCGATCCAAGATTTATAGAGAAAAGACTGCGAGAAAAGAGAAGGCTCAGGAATTTATTCTTCCCCTAATTAAGCAACAGCTGAGTTACGCAGAGGTACTATCAAATGGAATTAGTCAGCAAAAATCCCCTGTTCGGGCACCACTAAAACAAAGCAAGTTGGCGGCAACTCTCGTGCATTTGAACTCCTCTATTTTTGCACCTGATAAACAGAGCAAGCATCAATGCTGGATCCGAGAAGAAATTGAAGTGTTTAAAGAAGATTTTATCAAATTAAAGTAAGCATTAATCCTCTATTTGCCGATAAAGCTTTGGTTAAAGTTATCTCAAGGCAATTTAGAAGAGTGAATCGTCTGGAAAATGGTTCGACTATGGAAGATTCCATCTTCTTTTTGAAAAATGGTGTTCTAAGCAACATAGCCGGCCAACTTGCATCAAAGGCTACAGAGGATGGTTGGCAATAAGAAACCTGCTGCTGGAATACTGGAACAGAGCCACCTTTGAAGCTTTACGTTCCCATTTTGGAGGTTTGGAAGAGAGAGCTCTAGAAACACTTAACCTTTTGAATGTATGAGAAGCCAAAATCAAAGTCAAAAGGAATTTATGTGGTTTTATGCCATCAATTGAAATTAAGAATGAATTGAGAGGTATAATTTTTGTGAACTTCGGGGATATTGAAGCCATGGAAACTCTTTCTTACGTACACAAAGAATTATTCTTTAAAGATTTCAACAATCCAATTGATCAAAGTCGTTTGATTAAAGTAGCAATGGATGAAGATGTTAGGATTATTTTATCAAACCACAACAGTGAAGTCCAAAAACCGATAGGCTCACCGGAGAAGACAACGGAAAAATCTGATCTTGAGAAAGTTGCCGTGACTACTTCAAGGAATGTCGAGGGTCTCTTTCAACTTGAAAGTGCGCCACTCCAGGACACCAACCAAAAAGCTGAAAAGCTTATTGCGGGCGTAAGTGAAGTAGCTAAAAAGTCGGAAGTTATTAGGAGAGAGAATCTCGTTGGCCGAAATTGTAGTCTTCCAAGCAACCAAAGCAAAAATGCTCTAAATTCCTTAATAATTATAGAATCCAGGGTGTCGACATCCCCTAGTCTCCCCTCGATTGAAAATGCATTCAATCCTGCCCTCAGGTTTGTTACCAATATCGCAGAGGAGATCAACACATTAGAAACTAAACCATCATTTTTGCCGAGTCTCAAGAAAGAACACATTAACTCAAATGGGATCTCACTGATGATCCCTTTCATTCGCTCCGGTAATACGCTCCCCAATAAGAAATCGCCATTGTCTGCGGTCAGAAAAACAACCAACCTCTTCAAACCCTTTCCAAAACATTTTGTGAAAGGAAGAACATCATTCCTTAATTCATGGTCAGCCCTCTCTAATTTAAATTTGCTTGAAGAAAGCTATGCCAAACTTCAAATACCAGAATATCCTTCTAGTAGATCCGTAAAATATCCCTTTCCTTCTCAACTCTCTCAACAATCAGTGATAGTTCTCCTGGGCTCAAATATTCATTTTGTACGAGGTACCTTTTGTCCTTATCCTACCAAATCAAGTCTTAAATCTCAAGAATCAGTGGTGAGTGCAAGCAGTGATGAATTGAAAGTGCAAAGAAAAGAAACTCCATCAAATGATCTCGAAACAGAGGACTCTATTAACGAGGATCTCAACAGGCTATTTCAAGCTGTAGAAGGTAATGATAGTGGTGCACTTGATGAAGCAATCGTCTCCCATTATCCAAGCAAAGACATTCCTAAGCACTTAAAATTAATCATTGACATTTGCACGATATCCCTGAGAACAACTAAGGCTGTGAGCGAAAGCTGAAAAATGAAAATTATTTCATGGAACACAAGAGGAATTGGGGATCAATCCAAGCAATTGGCCCTTAAACGCATGATTTTGAAGTCAAACCCGGATTTGGTGCTTATCCAAGAAACCAAGAAAGATGCCATTGAATTGGATGTTATCAAAGCTATCTGGAGTTCTAAGGACATTAGATGGATTTATGTTGAAGCCTTTGGCAAATCAGGGGGAACACTCACCATGTGGGATGAAAGTAAAGTATCAATTCTAGAATCCCTCAAAGGAGGTTACTCACTCTCGGTAAAATGCAAATCCCTAAGTAAAAAGGTAGATTGGGTGACTAATATATATGGTCCTACTTATTACAAAGAAAGAAGACACATTTGGCCGGAATTAGCTTCCCTCTCAGCTTATTGTATAGAGGCATGGTGTTTGGGGGGAGACTTGAACATGACCAGATTGATTCAAGAAAGATCCCCAACTGGAAGCTGGACAAAAGGTATGAAGAAATTCAATAAATTCATAGAAAACGCTCATCTCTTGGAAATTCCACTCTCAAATGGTCACTTTACTTGGTCAAGAGAAGGAAGAGGTTCGTCTTGCTCACTGCTGGACAAGTTTCTTGTTTCCAATAATTGGGAGGAGGCCTTCGATGACACGAGAGTGGCAAGGCAAGCAAGATTGTATTCTGATCACTTCCCCTATTATTAG

mRNA sequence

ATGGAAGTTCGAAAAGCAATTCACTTATCGGAGTCGCATATGCAGTGGTTGGTAAAGCAACTTGCAGAGCTTCTTAACGTTTCAAGCGTTCGTTTTTTCTTAAAGGAAATGCGAGACACCTCAGGAGCAATGAGATTATCAAAATTCAAAAACAACATGGGGTGGAATTTGAGATGCGTGGTTTGGCCAGCTATCGGAGGTCGGTTCTTCATTCATATACCTGAAGGGTCTGCACAACAAGGATGGTCAGAGTTCTTGGAAATGCTTATTAGCTTCACCAATCGATCCAAGATTTATAGAGAAAAGACTGCGAGAAAAGAGAAGGCTCAGGAATTTATTCTTCCCCTAATTAAGCAACAGCTGAGTTACGCAGAGGTACTATCAAATGGAATTAGTCAGCAAAAATCCCCTGTTCGGGCACCACTAAAACAAAGCAAGTTGGCGGCAACTCTCGTGCATTTGAACTCCTCTATTTTTGCACCTGATAAACAGAGCAAGCATCAATGCTGGATCCGAGAAGAAATTGAAGTGTTTAAAGAAGATTTTATCAAATTAAACCGGCCAACTTGCATCAAAGGCTACAGAGGATGGTTGGCAATAAGAAACCTGCTGCTGGAATACTGGAACAGAGCCACCTTTGAAGCTTTACGTTCCCATTTTGGAGAAGCCAAAATCAAAGTCAAAAGGAATTTATGTGGTTTTATGCCATCAATTGAAATTAAGAATGAATTGAGAGGTATAATTTTTGTGAACTTCGGGGATATTGAAGCCATGGAAACTCTTTCTTACGTACACAAAGAATTATTCTTTAAAGATTTCAACAATCCAATTGATCAAAGTCGTTTGATTAAAGTAGCAATGGATGAAGATGTTAGGATTATTTTATCAAACCACAACAGTGAAGTCCAAAAACCGATAGGCTCACCGGAGAAGACAACGGAAAAATCTGATCTTGAGAAAGTTGCCGTGACTACTTCAAGGAATGTCGAGGGTCTCTTTCAACTTGAAAGTGCGCCACTCCAGGACACCAACCAAAAAGCTGAAAAGCTTATTGCGGGCGTAAGTGAAGTAGCTAAAAAGTCGGAAGTTATTAGGAGAGAGAATCTCGTTGGCCGAAATTGTAGTCTTCCAAGCAACCAAAGCAAAAATGCTCTAAATTCCTTAATAATTATAGAATCCAGGGTGTCGACATCCCCTAGTCTCCCCTCGATTGAAAATGCATTCAATCCTGCCCTCAGGTTTGTTACCAATATCGCAGAGGAGATCAACACATTAGAAACTAAACCATCATTTTTGCCGAGTCTCAAGAAAGAACACATTAACTCAAATGGGATCTCACTGATGATCCCTTTCATTCGCTCCGGTAATACGCTCCCCAATAAGAAATCGCCATTGTCTGCGGTCAGAAAAACAACCAACCTCTTCAAACCCTTTCCAAAACATTTTGTGAAAGGAAGAACATCATTCCTTAATTCATGGTCAGCCCTCTCTAATTTAAATTTGCTTGAAGAAAGCTATGCCAAACTTCAAATACCAGAATATCCTTCTAGTAGATCCGTAAAATATCCCTTTCCTTCTCAACTCTCTCAACAATCAGTGATAGTTCTCCTGGGCTCAAATATTCATTTTGTACGAGGTACCTTTTGTCCTTATCCTACCAAATCAAGTCTTAAATCTCAAGAATCAGTGGTGAGTGCAAGCAGTGATGAATTGAAAGTGCAAAGAAAAGAAACTCCATCAAATGATCTCGAAACAGAGGACTCTATTAACGAGGATCTCAACAGGCTATTTCAAGCTGTAGAAGGTAATGATAGTGGTGCACTTGATGAAGCAATCGTCTCCCATTATCCAAGCAAAGACATTCCTAAGCACTTAAAATTAATCATTGACATTTGCACGATATCCCTGAGAACAACTAAGGCTTCAAACCCGGATTTGGTGCTTATCCAAGAAACCAAGAAAGATGCCATTGAATTGGATGTTATCAAAGCTATCTGGAGTTCTAAGGACATTAGATGGATTTATGTTGAAGCCTTTGGCAAATCAGGGGGAACACTCACCATGTGGGATGAAAGTAAAGTATCAATTCTAGAATCCCTCAAAGGAGGTTACTCACTCTCGGTAAAATGCAAATCCCTAAGTAAAAAGGTAGATTGGGTGACTAATATATATGGTCCTACTTATTACAAAGAAAGAAGACACATTTGGCCGGAATTAGCTTCCCTCTCAGCTTATTGTATAGAGGCATGGTGTTTGGGGGGAGACTTGAACATGACCAGATTGATTCAAGAAAGATCCCCAACTGGAAGCTGGACAAAAGGTATGAAGAAATTCAATAAATTCATAGAAAACGCTCATCTCTTGGAAATTCCACTCTCAAATGGTCACTTTACTTGGTCAAGAGAAGGAAGAGGTTCGTCTTGCTCACTGCTGGACAAGTTTCTTGTTTCCAATAATTGGGAGGAGGCCTTCGATGACACGAGAGTGGCAAGGCAAGCAAGATTGTATTCTGATCACTTCCCCTATTATTAG

Coding sequence (CDS)

ATGGAAGTTCGAAAAGCAATTCACTTATCGGAGTCGCATATGCAGTGGTTGGTAAAGCAACTTGCAGAGCTTCTTAACGTTTCAAGCGTTCGTTTTTTCTTAAAGGAAATGCGAGACACCTCAGGAGCAATGAGATTATCAAAATTCAAAAACAACATGGGGTGGAATTTGAGATGCGTGGTTTGGCCAGCTATCGGAGGTCGGTTCTTCATTCATATACCTGAAGGGTCTGCACAACAAGGATGGTCAGAGTTCTTGGAAATGCTTATTAGCTTCACCAATCGATCCAAGATTTATAGAGAAAAGACTGCGAGAAAAGAGAAGGCTCAGGAATTTATTCTTCCCCTAATTAAGCAACAGCTGAGTTACGCAGAGGTACTATCAAATGGAATTAGTCAGCAAAAATCCCCTGTTCGGGCACCACTAAAACAAAGCAAGTTGGCGGCAACTCTCGTGCATTTGAACTCCTCTATTTTTGCACCTGATAAACAGAGCAAGCATCAATGCTGGATCCGAGAAGAAATTGAAGTGTTTAAAGAAGATTTTATCAAATTAAACCGGCCAACTTGCATCAAAGGCTACAGAGGATGGTTGGCAATAAGAAACCTGCTGCTGGAATACTGGAACAGAGCCACCTTTGAAGCTTTACGTTCCCATTTTGGAGAAGCCAAAATCAAAGTCAAAAGGAATTTATGTGGTTTTATGCCATCAATTGAAATTAAGAATGAATTGAGAGGTATAATTTTTGTGAACTTCGGGGATATTGAAGCCATGGAAACTCTTTCTTACGTACACAAAGAATTATTCTTTAAAGATTTCAACAATCCAATTGATCAAAGTCGTTTGATTAAAGTAGCAATGGATGAAGATGTTAGGATTATTTTATCAAACCACAACAGTGAAGTCCAAAAACCGATAGGCTCACCGGAGAAGACAACGGAAAAATCTGATCTTGAGAAAGTTGCCGTGACTACTTCAAGGAATGTCGAGGGTCTCTTTCAACTTGAAAGTGCGCCACTCCAGGACACCAACCAAAAAGCTGAAAAGCTTATTGCGGGCGTAAGTGAAGTAGCTAAAAAGTCGGAAGTTATTAGGAGAGAGAATCTCGTTGGCCGAAATTGTAGTCTTCCAAGCAACCAAAGCAAAAATGCTCTAAATTCCTTAATAATTATAGAATCCAGGGTGTCGACATCCCCTAGTCTCCCCTCGATTGAAAATGCATTCAATCCTGCCCTCAGGTTTGTTACCAATATCGCAGAGGAGATCAACACATTAGAAACTAAACCATCATTTTTGCCGAGTCTCAAGAAAGAACACATTAACTCAAATGGGATCTCACTGATGATCCCTTTCATTCGCTCCGGTAATACGCTCCCCAATAAGAAATCGCCATTGTCTGCGGTCAGAAAAACAACCAACCTCTTCAAACCCTTTCCAAAACATTTTGTGAAAGGAAGAACATCATTCCTTAATTCATGGTCAGCCCTCTCTAATTTAAATTTGCTTGAAGAAAGCTATGCCAAACTTCAAATACCAGAATATCCTTCTAGTAGATCCGTAAAATATCCCTTTCCTTCTCAACTCTCTCAACAATCAGTGATAGTTCTCCTGGGCTCAAATATTCATTTTGTACGAGGTACCTTTTGTCCTTATCCTACCAAATCAAGTCTTAAATCTCAAGAATCAGTGGTGAGTGCAAGCAGTGATGAATTGAAAGTGCAAAGAAAAGAAACTCCATCAAATGATCTCGAAACAGAGGACTCTATTAACGAGGATCTCAACAGGCTATTTCAAGCTGTAGAAGGTAATGATAGTGGTGCACTTGATGAAGCAATCGTCTCCCATTATCCAAGCAAAGACATTCCTAAGCACTTAAAATTAATCATTGACATTTGCACGATATCCCTGAGAACAACTAAGGCTTCAAACCCGGATTTGGTGCTTATCCAAGAAACCAAGAAAGATGCCATTGAATTGGATGTTATCAAAGCTATCTGGAGTTCTAAGGACATTAGATGGATTTATGTTGAAGCCTTTGGCAAATCAGGGGGAACACTCACCATGTGGGATGAAAGTAAAGTATCAATTCTAGAATCCCTCAAAGGAGGTTACTCACTCTCGGTAAAATGCAAATCCCTAAGTAAAAAGGTAGATTGGGTGACTAATATATATGGTCCTACTTATTACAAAGAAAGAAGACACATTTGGCCGGAATTAGCTTCCCTCTCAGCTTATTGTATAGAGGCATGGTGTTTGGGGGGAGACTTGAACATGACCAGATTGATTCAAGAAAGATCCCCAACTGGAAGCTGGACAAAAGGTATGAAGAAATTCAATAAATTCATAGAAAACGCTCATCTCTTGGAAATTCCACTCTCAAATGGTCACTTTACTTGGTCAAGAGAAGGAAGAGGTTCGTCTTGCTCACTGCTGGACAAGTTTCTTGTTTCCAATAATTGGGAGGAGGCCTTCGATGACACGAGAGTGGCAAGGCAAGCAAGATTGTATTCTGATCACTTCCCCTATTATTAG

Protein sequence

MEVRKAIHLSESHMQWLVKQLAELLNVSSVRFFLKEMRDTSGAMRLSKFKNNMGWNLRCVVWPAIGGRFFIHIPEGSAQQGWSEFLEMLISFTNRSKIYREKTARKEKAQEFILPLIKQQLSYAEVLSNGISQQKSPVRAPLKQSKLAATLVHLNSSIFAPDKQSKHQCWIREEIEVFKEDFIKLNRPTCIKGYRGWLAIRNLLLEYWNRATFEALRSHFGEAKIKVKRNLCGFMPSIEIKNELRGIIFVNFGDIEAMETLSYVHKELFFKDFNNPIDQSRLIKVAMDEDVRIILSNHNSEVQKPIGSPEKTTEKSDLEKVAVTTSRNVEGLFQLESAPLQDTNQKAEKLIAGVSEVAKKSEVIRRENLVGRNCSLPSNQSKNALNSLIIIESRVSTSPSLPSIENAFNPALRFVTNIAEEINTLETKPSFLPSLKKEHINSNGISLMIPFIRSGNTLPNKKSPLSAVRKTTNLFKPFPKHFVKGRTSFLNSWSALSNLNLLEESYAKLQIPEYPSSRSVKYPFPSQLSQQSVIVLLGSNIHFVRGTFCPYPTKSSLKSQESVVSASSDELKVQRKETPSNDLETEDSINEDLNRLFQAVEGNDSGALDEAIVSHYPSKDIPKHLKLIIDICTISLRTTKASNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLKGGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRLIQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWEEAFDDTRVARQARLYSDHFPYY

Homology

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BLAST of CmUC04G070930 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 5.3e-52
Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 643 NPD-LVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLK 702
           +PD LV+    +   I++ +IK++WSSKDI W  VE+FG+ GG LTMWD SK+ ++E+LK
Sbjct: 67  DPDHLVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLK 126

Query: 703 GGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRL 762
           GGYSLS+   +  KK  W+TN+YGP  Y+ERR +W  L SLS YC  AWC+GG  N+TR 
Sbjct: 127 GGYSLSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRW 186

Query: 763 IQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWE 822
             E  P    T+GM++FN  I++ ++ E+PL NG  TWSREG   S SLLD F +   W+
Sbjct: 187 AHECFPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWD 246

Query: 823 EAFDDTRVARQARLYSDHFP 842
           E  +++RV R+A   SDHFP
Sbjct: 247 EISENSRVGRKAHTISDHFP 266

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BLAST of CmUC04G070930 vs. NCBI nr
Match: XP_038876676.1 (uncharacterized protein LOC120069076 [Benincasa hispida])

HSP 1 Score: 204.9 bits (520), Expect = 2.7e-48
Identity = 98/192 (51.04%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 637 RTTKASNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSI 696
           R  K  NPD+VLIQETKKD IE   IK++WSSK++   +VEA GKSGG LT+WD+SK+ +
Sbjct: 22  RFLKKVNPDIVLIQETKKDRIEGSFIKSLWSSKEVGCAFVEAKGKSGGLLTVWDDSKILV 81

Query: 697 LESLKGGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDL 756
               K  +SLS+KC++++KK+ W+TN+YGP  Y+ERR +W EL+SL+    + WC+GGD 
Sbjct: 82  SSISKDEFSLSIKCQTINKKICWITNVYGPCDYQERRRLWAELSSLAEKLDDPWCIGGDF 141

Query: 757 NMTRLIQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLV 816
           N  R   ER P G  T+ M  FNKFI   +LLEIPLSNG FTWS+EG   S S L  FL+
Sbjct: 142 NSIRRRHERYPVGKATRDMNNFNKFIRLNNLLEIPLSNGQFTWSKEGDVVSKS-LKMFLI 201

Query: 817 SNNWEEAFDDTR 829
               ++  +  R
Sbjct: 202 IQGLQDKLEPCR 212

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BLAST of CmUC04G070930 vs. NCBI nr
Match: XP_030478286.1 (uncharacterized protein LOC115695356 [Cannabis sativa])

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-42
Identity = 82/204 (40.20%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 638 TTKASNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSIL 697
           T    NPD+V++QE KK +++   I +IW S+   WI + A G+SGGTL +WD   +++L
Sbjct: 23  TNSKVNPDMVILQEVKKASVDRMYIGSIWRSRFKAWILILAIGRSGGTLLVWDTRSITVL 82

Query: 698 ESLKGGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLN 757
           +S+ G +S+SV  ++  K+  W + +YGP  Y ER   W E+A LSA C + WCLG D N
Sbjct: 83  DSMVGEFSISVLIEAEGKRPWWFSGVYGPCSYTERLEFWDEMAGLSAICGDVWCLGRDFN 142

Query: 758 MTRLIQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVS 817
           + R +QE+  + SWTK MK F++ +    L++  L+NG FTWS       C  LD+F  +
Sbjct: 143 VVRRVQEKLNSNSWTKSMKMFDQLVRELKLMDPKLNNGKFTWSNFRNKPICCRLDRFFFT 202

Query: 818 NNWEEAFDDTRVARQARLYSDHFP 842
           NNW   F   +     R+ SDH P
Sbjct: 203 NNWSNLFTFVQQEMLVRIVSDHSP 226

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BLAST of CmUC04G070930 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 172.2 bits (435), Expect = 1.9e-38
Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 644 PDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLKGG 703
           PD+V++ ETKK+ ++  ++  +W S+   W++  + G+SGG   +W+   VS+++S+ G 
Sbjct: 36  PDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVGD 95

Query: 704 YSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRLIQ 763
           +S+S++         W++ IYGP   +ER   W ELA L  YC + WCLGGD N+ R   
Sbjct: 96  FSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFSA 155

Query: 764 ERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWEEA 823
           E+S  G  TK M+ FN FI+  +L +  L N  FTWS     + C  LD+FLVS +WE+ 
Sbjct: 156 EKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDH 215

Query: 824 FDDTRVARQARLYSDHFP 842
           F   R     R+ SDH P
Sbjct: 216 FPHYRHKALPRITSDHCP 233

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BLAST of CmUC04G070930 vs. NCBI nr
Match: BBH07150.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 171.8 bits (434), Expect = 2.5e-38
Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 644 PDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLKGG 703
           PD+V++ ETKK+ ++  ++  +W S+   W++  + G+SGG   +W+   VS+++S+ G 
Sbjct: 17  PDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVGE 76

Query: 704 YSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRLIQ 763
           +S+S++         W++ IYGP   +ER   W ELA L  YC + WCLGGD N+ R   
Sbjct: 77  FSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFSA 136

Query: 764 ERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWEEA 823
           E+S  G  TK M+ FN FI+  +L +  L N  FTWS     + C  LD+FLVS +WE+ 
Sbjct: 137 EKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDH 196

Query: 824 FDDTRVARQARLYSDHFP 842
           F   R     R+ SDH P
Sbjct: 197 FPHYRHKALPRITSDHCP 214

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BLAST of CmUC04G070930 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-52
Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 643 NPD-LVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLK 702
           +PD LV+    +   I++ +IK++WSSKDI W  VE+FG+ GG LTMWD SK+ ++E+LK
Sbjct: 67  DPDHLVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLK 126

Query: 703 GGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRL 762
           GGYSLS+   +  KK  W+TN+YGP  Y+ERR +W  L SLS YC  AWC+GG  N+TR 
Sbjct: 127 GGYSLSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRW 186

Query: 763 IQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWE 822
             E  P    T+GM++FN  I++ ++ E+PL NG  TWSREG   S SLLD F +   W+
Sbjct: 187 AHECFPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWD 246

Query: 823 EAFDDTRVARQARLYSDHFP 842
           E  +++RV R+A   SDHFP
Sbjct: 247 EISENSRVGRKAHTISDHFP 266

[Close]

BLAST of CmUC04G070930 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.2e-43
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 642  SNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLK 701
            +NPDLV++QE K+  ++   I +IW S+   WI + A G+SGGTL +WD   +S+L+SL 
Sbjct: 950  ANPDLVILQEVKRATVDRRFIGSIWRSRFKAWILLPALGRSGGTLLIWDTRTISVLDSLV 1009

Query: 702  GGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRL 761
            G +S+SV   +  K+  W + +YGP  YK R   W ELA LS+ C E+WC+GGD N+TR 
Sbjct: 1010 GEFSISVLINAEGKEPWWFSGVYGPCSYKLRPEFWDELAGLSSICGESWCVGGDFNVTRR 1069

Query: 762  IQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWE 821
            + E+  + S T+ MK F+  I    L++  L NG FTWS       CS LD+FL SNNW 
Sbjct: 1070 VGEKLNSSSCTRSMKLFDGLIRELQLIDPKLENGSFTWSNFRASPVCSRLDRFLFSNNWN 1129

Query: 822  EAFDDTRVARQARLYSDHFP 842
              +   R     RL SDH P
Sbjct: 1130 VIYPFVRQEMLVRLVSDHSP 1149

[Close]

BLAST of CmUC04G070930 vs. ExPASy TrEMBL
Match: A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.1e-42
Identity = 86/200 (43.00%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 642  SNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLK 701
            +NPDLV++QE K+ +++   I +IW S+   WI + A G+SGGTL +WD   +++L+SL 
Sbjct: 926  ANPDLVILQEVKRTSVDRRFIGSIWRSRFKAWIIIPAIGRSGGTLLIWDTRTITVLDSLV 985

Query: 702  GGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRL 761
            G +S+SV  K+  K   W + +YGP  YK R   W ELA LSA C ++WC+GGD N+TR 
Sbjct: 986  GEFSISVLIKAEGKDPWWFSGVYGPCSYKLRPAFWDELAGLSAICGDSWCVGGDFNVTRR 1045

Query: 762  IQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWE 821
              E+  + S T+ MK F+  I    L++  L NG FTWS       CS LD+FL +NNW 
Sbjct: 1046 PGEKLNSSSCTRSMKLFDGLIRELRLIDPKLENGRFTWSNFRTSPVCSRLDRFLFTNNWN 1105

Query: 822  EAFDDTRVARQARLYSDHFP 842
              +   R     RL SDH P
Sbjct: 1106 VIYPFVRQEMLVRLVSDHSP 1125

[Close]

BLAST of CmUC04G070930 vs. ExPASy TrEMBL
Match: A0A803QEA6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.1e-42
Identity = 84/200 (42.00%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 642 SNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLK 701
           +NPDLV++QE K+  ++   I +IW S+   WI + A G+SGGTL +WD   +S+L+SL 
Sbjct: 377 ANPDLVILQEVKRATVDRRFIGSIWRSRFKAWILIPAIGRSGGTLLIWDTRTISVLDSLV 436

Query: 702 GGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRL 761
           G +S+SV   +  K+  W + +YGP  YK R   W ELA LS+ C ++WC+ GD N+TR 
Sbjct: 437 GEFSISVLINAEGKEPWWFSGVYGPCSYKLRPEFWDELAGLSSICGKSWCVAGDFNVTRR 496

Query: 762 IQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWE 821
           + E+  + S+T+ MK F+  I    L++  L NG FTWS       CS LD+FL +NNW 
Sbjct: 497 VGEKLNSSSFTRSMKLFDGLIRELQLIDPKLENGSFTWSNFRASPVCSRLDRFLFTNNWN 556

Query: 822 EAFDDTRVARQARLYSDHFP 842
             F   R     R+ SDH P
Sbjct: 557 IIFPFVRQELLVRIVSDHSP 576

[Close]

BLAST of CmUC04G070930 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-41
Identity = 86/200 (43.00%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 642 SNPDLVLIQETKKDAIELDVIKAIWSSKDIRWIYVEAFGKSGGTLTMWDESKVSILESLK 701
           +NPD+V++QE K+  ++   I +IW S+   WI + A G+SGGTL +WD   +S+L+SL 
Sbjct: 27  ANPDMVILQEVKRATVDRRFIGSIWRSRFKAWILLPAIGRSGGTLLIWDTRIISVLDSLV 86

Query: 702 GGYSLSVKCKSLSKKVDWVTNIYGPTYYKERRHIWPELASLSAYCIEAWCLGGDLNMTRL 761
           G +S+SV   +  K+  W + +YGP  YK R   W ELA LS+ C E+WC+GGD N+TR 
Sbjct: 87  GEFSISVLINAEGKEPWWFSGVYGPCSYKIRHVFWDELAGLSSICGESWCVGGDFNVTRR 146

Query: 762 IQERSPTGSWTKGMKKFNKFIENAHLLEIPLSNGHFTWSREGRGSSCSLLDKFLVSNNWE 821
           + E+  + S T+ MK F+  I    L++  L NG FTWS       CS LD+FL  NNW 
Sbjct: 147 VGEKLNSSSSTRSMKLFDGLIRELQLIDPKLENGSFTWSNFRAIPICSRLDRFLFLNNWN 206

Query: 822 EAFDDTRVARQARLYSDHFP 842
             F   R     RL SDH P
Sbjct: 207 VVFPFVRQEMLVRLVSDHSP 226

The following BLAST results are available for this feature:

BLAST of CmUC04G070930 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98683.1	5.3e-52	49.50	hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]	[more]
XP_038876676.1	2.7e-48	51.04	uncharacterized protein LOC120069076 [Benincasa hispida]	[more]
XP_030478286.1	1.3e-42	40.20	uncharacterized protein LOC115695356 [Cannabis sativa]	[more]
VVA20479.1	1.9e-38	38.38	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
BBH07150.1	2.5e-38	38.38	TatD related DNase [Prunus dulcis]	[more]

BLAST of CmUC04G070930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC04G070930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHE3	2.6e-52	49.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A803QQM3	8.2e-43	43.50	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QI00	4.1e-42	43.00	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QEA6	9.1e-42	42.00	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803P8A0	2.0e-41	43.00	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of CmUC04G070930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 629..843 e-value: 2.3E-23 score: 85.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 639..842
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 640..779
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 640..779

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G070930.1	CmUC04G070930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0004518	nuclease activity