CmUC04G070760 (gene) Watermelon (USVL531) v1

Overview
NameCmUC04G070760
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein Ycf2
LocationCmU531Chr04: 10998287 .. 11001974 (+)
RNA-Seq ExpressionCmUC04G070760
SyntenyCmUC04G070760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATAATCCGGGAGGGGGTGTGACAGGGTGTGACAGCAGCGGTTTGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTGACGACAGAAAAAAGGATTGATCAAATTCTATTGAATCTGACTCATAGTGATCATTTATCAAAGAATGACTCTTGTTATCAAATGGTTGAACAACTGGGAGTAATTTACTTATGATACTTAGTTGACATTCATAAAAAGTATCTAATGAATTATGAGTTTAATACATCCTGTTTAGCAGAAAGACGAACATTCCTTAATCATTATCAGACAATCACTTGGTTCAATCTTTTCCATCTCATGGTTCAATCTTATTCAATCGTAGCGTAGGCAAAACCCAATAACCTGCCCAGAGTTTGACCTTCTCTGGTCCTGGAAGGAAAATCCACTGAACTTTCCTTCTCCCAATGAGTAATAACACTTGGAGGAAGATGATCAGGATCTCACGTGTGGCAACTTTTGGAAAAAACTTAGAATCCCAGAGGTACCTAAAGCAAAAGGAAACTTACAACTTACTAGTGAAAGAGGAGAAAAGAAAATTGAAGGCCCCGAGCCAAAATGCAATAGGGTCTTCAAGCCCCACGCTCGATTCTCGAGATTCATGGGCCATCTCGTGAAGATCTTCGATCTAAACCTTTGCATCAACTTTCTCTGTCAATCTCAACCACGCTTTCGCTATCACAAGAAAATAACGACCAAATAGCTATCGCTCGCTCAATTGCTTCACATATTATGAAAGTCGCATTGCCCGAAGGGGGCATGCTGCAAGAGCATAGGTGAGTGGTAAGCGTTGGAGGCATGCCCAAAGTGCAATGGCAGTTGTGTGGTTCCATGTTGCTAGATTGAGAACTGTAGGGTGGCGGGGACTTCGACTGCCTTGTATCAGGTGAAGATAAGGGGTGGTAGGCTTAGTAGGGCTCAAACCTACAATATAACTGTTATGAGTGGTACGTTTCAACCAATTAAACTATAAGCCCCTACGGATCTTTACATGCAATTCGCTCACTTCGAGAAGAGGGGAGGGAAAGAGGAGACCTTTGCTTTATTTACTTCTTCCTATCCTTTATAGTCGAGCGTCTTTTGAACTTCGTCTAGAAAAAAAATGATTTTCTATCTATTATAATATATATATATATATATATATATATATATATATATTCTAGATATTATGAATTATAATAATATAATTAAGCAAGTGGCTCTTTCATGACTCAAACTATCGGTACGTTTTCCAGCTCGAAACAACCGACTCAAACTGGCAAGAGCTCTCTATTTGCTTCCAGTGACGGTTGTTCACCTTTAGTTAGAAGCAGAAGTAAAAGACGCCCTTTGCCCCACACTAAAGAAAAAGTACAGGGGAGGTGGGGACTTGTGAAAGTCAAGAGAGAGAAACAACAAACTTGGTTACAAGAATCGAAGGTTAGGACAATTTGAAGCTAGACCTAAAAAAGCTTATTCCTACCTCTTCCTATCAATGTTGCCAATTCCCAAAAGACTAATCTAATAATGTACCCATGTGCATATAGTTGCCCAACTACTCTTTCTTCCTTCGACTTTTTTGGTCACTTCTGAATCTGTCGTATTTAGGAGAGCTTGCTTCTTGGTGGATGATAACTTGTAGAAATACAAGTTATTATTATTTCTCTTAGAAAAATAGAGTTTAAATAGAGAATCATGCGGTAGTTTGAGTTAAATTCTATTGATAAATCTTCCTATGCGTTCTACACTTGTAAATTGATGAAGATAATTGTTTTGAAGCTTTTTGAGCTTAAACACATGCTTTGACGAAGGATCGCAAGCAAACCATGGATGCGTTGTGTTGTGACAGATCTAAAGTCCCCGGCAACGGCGCCAAAAACTTGTTGTGCTGTTTAACGTGCTTAACATTAAGAAATATTATCTATCAAGTCATCCTATTCTTAACCCAAGTATAAGCAAAGAAATAGGTTTACTTGGTGAGTTCGAGGTCGAACACAGGGAGTATGCTGATTCTAAAATTCGTTACATTAATTGAGCTGGAGTAATAACCAAAAATATTTAATGAAGGATGCGTCTAACTAAAGCAAGCAATAACATGTACACTAGATTAAAAAGTGGTAGATGGTAAGGGATGCGACACAGCAAGTTCAATTAAGTGGATTAAATGAATGGATAAAAACAAGGTTCGGGTTGGTTAGCTTCTAACATCAGAAATGCATAGTGAAAGTCTATTCATACTTGCAACTCTTCTCTCGGTTGTCAGCCGCTATGCGTTATATGTCTATAACGCATAGGTGAATATTAAGTGCTAAGGTTATTCCTATGTCTAGGTAACACTTCTTAGCCTTGTCAATTGAGTTCCACAATTATTTACCCTCTCGAGCAGTCTAATTGTTACTACTTATATCGATTAGCTAGATGGACATAAGCATCAGATTAAGATTACAATTGACAAGATTAAATAGTTACACTATGGTTCTTATTTAGATGCTAATGCAACCTGTGACCCTTGAAAGATTAGCTACTTATGGATTCAAAGTAATAAGCGGAAAGTGTAGAGAAATGGATAGACATGGAAGAATTGTAGATTACTGAACGAAATACAATCTTAGACAGTTCAATGTCTTGATAACAAATTTAAAATCAAAGCTAGAAAAAGATAGAAAGCAGGAAGGCGTTTCAATGTCTTGAGTCGCCGGAATGGAAGCGTGAGACCTACTGTGAAGTGGTCAGACGGATGGAAGACTCTTCTCTCTCGAGCTATTCATGTTCGGTTATCGTCTGGAAGGGATTCTGCTGTCACTTAGGAATTCTTCCGAGAATCAACAACCTTTTTTAGCTTGTAGGTCTGCCATTTTATAGAAACTACGTTCGTAATCAGCGGCAAATCTGCGTGATTGGAGGTATAATTGATGTTTTGCATCTATCTCGCGTAATTGCATAATTCTCGGTTCAATTTAGATCCACTACCTTAGCCGCAGATCATGCAAGTTAATCTTCCAACAATCTTTACAGATTCTGACCTGATTTTTCGCTGCCTTGCGTTTCACATGTAAGACGCATCTTGAGGTTCTCTGCGTTTCTGCACTAAAGCATGCGTTTTAGGCTCATAAACATATCAAAACAATTATCTTCATCAATTTACAAGAGTAAAACGCATAAAGAAATTTATCAATAGAAATTAACTAATACTACCGCATAATTCTCTATTAAACTCTATTTTTCTAAGATAAGGGCAATAATAACTTGTATTTCTACAAGTTATCACGTTGGCAACCCTTCAACGCAGGTTGATGCGTTGGCAACCCATGGATGCGTTGGCATAATTAAACTCATGAACCCAAGTTATCCGTGGACGCATATCAACAAGGCAACAGAAAATCATATACGAATCTTGAGAGATTGTCGGGAGATTGATATGCTTGATATGAGGCGAGAGTGGTGCATTGAAATTAAACCGGAAATCACGCGATTAGGCGAGATGGACGCAAGGCAGAAATTCAGCCTCCAATCATGCAAATTTGCCAACGGCAACGCAACATCTAATAAAAAGGCAAACCTGAAGACGAAAATGTGGTTGAACCTCTCGGAAGAATTCCTAAGTGATAACAGAGTTCTCTCCAGACGACAACTAGAGACAAATAGCTCGAAAGAGAAGAGTCTTCCCTCCGCCTGA

mRNA sequence

ATGGAGAATAATCCGGGAGGGGGTGTGACAGGGTGTGACAGCAGCGGTTTGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTGACGACAGAAAAAAGGATTGATCAAATTCTATTGAATCTGACTCATAGTGATCATTTATCAAAGAATGACTCTTGTTATCAAATGGGTCTTCAAGCCCCACGCTCGATTCTCGAGATTCATGGGCCATCTCGTGAAGATCTTCGATCTAAACCTTTGCATCAACTTTCTCTGTCAATCTCAACCACGCTTTCGCTATCACAAGAAAATAACGACCAAATAGCTATCGCTCGCTCAATTGCTTCACATATTATGAAAGTCGCATTGCCCGAAGGGGGCATGCTGCAAGAGCATAGGGTGGCGGGGACTTCGACTGCCTTGTATCAGGTGAAGATAAGGGGTGGTAGGCTTAGTAGGGCTCAAACCTACAATATAACTGTTATGAGTGATTCTGACCTGATTTTTCGCTGCCTTGCGTTTCACATTTATCACGTTGGCAACCCTTCAACGCAGGTTGATGCGTTGGCAACCCATGGATGCGTTGGCATAATTAAACTCATGAACCCAAGTTATCCGTGGACGCATATCAACAAGGCAACAGAAAATCATATACGAATCTTGAGAGATTGTCGGGAGATTGATATGCTTGATATGAGGCGAGAGTGGTGCATTGAAATTAAACCGGAAATCACGCGATTAGGCGAGATGGACGCAAGGCAGAAATTCAGCCTCCAATCATGCAAATTTGCCAACGGCAACGCAACATCTAATAAAAAGGCAAACCTGAAGACGAAAATGTGGTTGAACCTCTCGGAAGAATTCCTAAGTGATAACAGAGTTCTCTCCAGACGACAACTAGAGACAAATAGCTCGAAAGAGAAGAGTCTTCCCTCCGCCTGA

Coding sequence (CDS)

ATGGAGAATAATCCGGGAGGGGGTGTGACAGGGTGTGACAGCAGCGGTTTGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTGACGACAGAAAAAAGGATTGATCAAATTCTATTGAATCTGACTCATAGTGATCATTTATCAAAGAATGACTCTTGTTATCAAATGGGTCTTCAAGCCCCACGCTCGATTCTCGAGATTCATGGGCCATCTCGTGAAGATCTTCGATCTAAACCTTTGCATCAACTTTCTCTGTCAATCTCAACCACGCTTTCGCTATCACAAGAAAATAACGACCAAATAGCTATCGCTCGCTCAATTGCTTCACATATTATGAAAGTCGCATTGCCCGAAGGGGGCATGCTGCAAGAGCATAGGGTGGCGGGGACTTCGACTGCCTTGTATCAGGTGAAGATAAGGGGTGGTAGGCTTAGTAGGGCTCAAACCTACAATATAACTGTTATGAGTGATTCTGACCTGATTTTTCGCTGCCTTGCGTTTCACATTTATCACGTTGGCAACCCTTCAACGCAGGTTGATGCGTTGGCAACCCATGGATGCGTTGGCATAATTAAACTCATGAACCCAAGTTATCCGTGGACGCATATCAACAAGGCAACAGAAAATCATATACGAATCTTGAGAGATTGTCGGGAGATTGATATGCTTGATATGAGGCGAGAGTGGTGCATTGAAATTAAACCGGAAATCACGCGATTAGGCGAGATGGACGCAAGGCAGAAATTCAGCCTCCAATCATGCAAATTTGCCAACGGCAACGCAACATCTAATAAAAAGGCAAACCTGAAGACGAAAATGTGGTTGAACCTCTCGGAAGAATTCCTAAGTGATAACAGAGTTCTCTCCAGACGACAACTAGAGACAAATAGCTCGAAAGAGAAGAGTCTTCCCTCCGCCTGA

Protein sequence

MENNPGGGVTGCDSSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSILEIHGPSREDLRSKPLHQLSLSISTTLSLSQENNDQIAIARSIASHIMKVALPEGGMLQEHRVAGTSTALYQVKIRGGRLSRAQTYNITVMSDSDLIFRCLAFHIYHVGNPSTQVDALATHGCVGIIKLMNPSYPWTHINKATENHIRILRDCREIDMLDMRREWCIEIKPEITRLGEMDARQKFSLQSCKFANGNATSNKKANLKTKMWLNLSEEFLSDNRVLSRRQLETNSSKEKSLPSA
Homology
[Close]
BLAST of CmUC04G070760 vs. NCBI nr
Match: YP_009560879.1 (Ycf2 [Trichosanthes kirilowii] >YP_009560896.1 Ycf2 [Trichosanthes kirilowii] >YP_009752455.1 Ycf2 protein [Trichosanthes tricuspidata] >YP_009752472.1 Ycf2 protein [Trichosanthes tricuspidata] >YP_009753663.1 Ycf2 protein [Trichosanthes wallichiana] >YP_009753681.1 Ycf2 protein [Trichosanthes wallichiana] >YP_009753748.1 Ycf2 protein [Trichosanthes nervifolia] >YP_009753765.1 Ycf2 protein [Trichosanthes nervifolia] >QAB33230.1 Ycf2 [Trichosanthes kirilowii] >QAB33247.1 Ycf2 [Trichosanthes kirilowii] >QIT04682.1 Ycf2 protein [Trichosanthes wallichiana] >QIT04700.1 Ycf2 protein [Trichosanthes wallichiana] >QIT04851.1 Ycf2 protein [Trichosanthes tricuspidata])

HSP 1 Score: 89.0 bits (219), Expect = 8.0e-14
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S LIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G+   R ++
Sbjct: 1509 NSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSSYQMIEQPGVIYLRYLV 1568

[Close]
BLAST of CmUC04G070760 vs. NCBI nr
Match: QXO02788.1 (Ycf2 [Cheirostylis moniliformis] >QXO02805.1 Ycf2 [Cheirostylis moniliformis])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-13
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            +S  IDD+EREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDS YQM ++ PRSI
Sbjct: 1344 NSDSIDDEEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSGYQM-IEQPRSI 1397

[Close]
BLAST of CmUC04G070760 vs. NCBI nr
Match: QVX27542.1 (Ycf2 [Glycyrrhiza inflata])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-13
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            SSGLIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKN+S YQM ++ P +I
Sbjct: 1146 SSGLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNNSGYQM-IEQPGTI 1199

[Close]
BLAST of CmUC04G070760 vs. NCBI nr
Match: QJQ79013.1 (hypothetical chloroplast RF21 [Glycyrrhiza triphylla])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-13
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            SSGLIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKN+S YQM ++ P +I
Sbjct: 1146 SSGLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNNSGYQM-IEQPGTI 1199

[Close]
BLAST of CmUC04G070760 vs. NCBI nr
Match: QJQ78649.1 (hypothetical chloroplast RF21 [Meristotropis bucharica])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-13
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            SSGLIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKN+S YQM ++ P +I
Sbjct: 1149 SSGLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNNSGYQM-IEQPGTI 1202

[Close]
BLAST of CmUC04G070760 vs. ExPASy Swiss-Prot
Match: A1XFZ9 (Protein Ycf2 OS=Nuphar advena OX=77108 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16
Identity = 45/55 (81.82%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            +S LIDD+EREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM ++ P SI
Sbjct: 1481 NSDLIDDEEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQM-IEQPGSI 1534

[Close]
BLAST of CmUC04G070760 vs. ExPASy Swiss-Prot
Match: Q6EVY7 (Protein Ycf2 OS=Nymphaea alba OX=34301 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16
Identity = 45/55 (81.82%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            +S LIDD+EREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM ++ P SI
Sbjct: 1474 NSDLIDDEEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQM-IEQPGSI 1527

[Close]
BLAST of CmUC04G070760 vs. ExPASy Swiss-Prot
Match: B1NWJ3 (Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S  IDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G    R ++
Sbjct: 1504 NSDWIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQMIEEPGAIYLRYLV 1563

[Close]
BLAST of CmUC04G070760 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S  IDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G    R ++
Sbjct: 1509 NSDSIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQMIEEPGAIYLRYLV 1568

[Close]
BLAST of CmUC04G070760 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S  IDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G    R ++
Sbjct: 1512 NSDSIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQMIEEPGAIYLRYLV 1571

[Close]
BLAST of CmUC04G070760 vs. ExPASy TrEMBL
Match: A0A410HFC5 (Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-14
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S LIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G+   R ++
Sbjct: 1509 NSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSSYQMIEQPGVIYLRYLV 1568

[Close]
BLAST of CmUC04G070760 vs. ExPASy TrEMBL
Match: A0A6H0ERE1 (Protein Ycf2 OS=Trichosanthes tricuspidata OX=654837 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-14
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S LIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G+   R ++
Sbjct: 1509 NSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSSYQMIEQPGVIYLRYLV 1568

[Close]
BLAST of CmUC04G070760 vs. ExPASy TrEMBL
Match: A0A6H0EQQ7 (Protein Ycf2 OS=Trichosanthes wallichiana OX=1144464 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-14
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S LIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G+   R ++
Sbjct: 1509 NSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSSYQMIEQPGVIYLRYLV 1568

[Close]
BLAST of CmUC04G070760 vs. ExPASy TrEMBL
Match: A0A6H0EVH3 (Protein Ycf2 OS=Trichosanthes nervifolia OX=1144448 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-14
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S LIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKNDS YQM    G+   R ++
Sbjct: 1509 NSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSSYQMIEQPGVIYLRYLV 1568

[Close]
BLAST of CmUC04G070760 vs. ExPASy TrEMBL
Match: A0A6M4EBK0 (Protein Ycf2 OS=Meristotropis bucharica OX=2731868 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.0e-14
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQMGLQAPRSI 69
            SSGLIDDKEREFLVQFSTLTTEKRIDQILL+LTHSDHLSKN+S YQM ++ P +I
Sbjct: 1146 SSGLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNNSGYQM-IEQPGTI 1199

[Close]
BLAST of CmUC04G070760 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-15
Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S  IDDKEREFLVQFSTL  EKRIDQILL+LTHSDHLSKNDS YQM    G    R ++
Sbjct: 1522 NSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLV 1581

[Close]
BLAST of CmUC04G070760 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-15
Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 0 

Query: 14   SSGLIDDKEREFLVQFSTLTTEKRIDQILLNLTHSDHLSKNDSCYQM----GLQAPRSIL 73
            +S  IDDKEREFLVQFSTL  EKRIDQILL+LTHSDHLSKNDS YQM    G    R ++
Sbjct: 1522 NSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLV 1581

The following BLAST results are available for this feature:
BLAST of CmUC04G070760 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009560879.18.0e-1474.60Ycf2 [Trichosanthes kirilowii] >YP_009560896.1 Ycf2 [Trichosanthes kirilowii] >Y... [more]
QXO02788.11.0e-1383.64Ycf2 [Cheirostylis moniliformis] >QXO02805.1 Ycf2 [Cheirostylis moniliformis][more]
QVX27542.11.0e-1383.64Ycf2 [Glycyrrhiza inflata][more]
QJQ79013.11.0e-1383.64hypothetical chloroplast RF21 [Glycyrrhiza triphylla][more]
QJQ78649.11.0e-1383.64hypothetical chloroplast RF21 [Meristotropis bucharica][more]
BLAST of CmUC04G070760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A1XFZ96.8e-1681.82Protein Ycf2 OS=Nuphar advena OX=77108 GN=ycf2-A PE=3 SV=1[more]
Q6EVY76.8e-1681.82Protein Ycf2 OS=Nymphaea alba OX=34301 GN=ycf2-A PE=3 SV=1[more]
B1NWJ31.5e-1573.02Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1[more]
Q14F971.5e-1573.02Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1[more]
A4GYV41.5e-1573.02Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1[more]
BLAST of CmUC04G070760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A410HFC53.9e-1474.60Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1[more]
A0A6H0ERE13.9e-1474.60Protein Ycf2 OS=Trichosanthes tricuspidata OX=654837 GN=ycf2 PE=3 SV=1[more]
A0A6H0EQQ73.9e-1474.60Protein Ycf2 OS=Trichosanthes wallichiana OX=1144464 GN=ycf2 PE=3 SV=1[more]
A0A6H0EVH33.9e-1474.60Protein Ycf2 OS=Trichosanthes nervifolia OX=1144448 GN=ycf2 PE=3 SV=1[more]
A0A6M4EBK05.0e-1483.64Protein Ycf2 OS=Meristotropis bucharica OX=2731868 GN=ycf2 PE=3 SV=1[more]
BLAST of CmUC04G070760 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00860.12.0e-1569.84Chloroplast Ycf2;ATPase, AAA type, core [more]
ATCG01280.12.0e-1569.84Chloroplast Ycf2;ATPase, AAA type, core [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33078PROTEIN YCF2-RELATEDcoord: 15..60
IPR008543Uncharacterised protein family Ycf2PANTHERPTHR33078:SF22PROTEIN YCF2coord: 15..60

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC04G070760.1CmUC04G070760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity