CmUC04G068850 (gene) Watermelon (USVL531) v1

Overview
NameCmUC04G068850
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionprotein phosphatase 2C 29-like
LocationCmU531Chr04: 3091159 .. 3091765 (-)
RNA-Seq ExpressionCmUC04G068850
SyntenyCmUC04G068850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGAGCCACTTAAATCGCTTCAAAAACCTTTGGCTGTGATTCCGGCCAAGGTTTTGACGAAGTAATTGATGTCATTGTCGAGGATGGTGGAATCGTCGAACCAGCAACATTGATTGAACTCCCCAAAGTGAGGGGAAATTTTGCTGGAATACTGCAATGGAGATGGGTGATTCTTCTTAATTTCGAGTGGAATTGAAATTTTGGTGCTGCAGCATTGTTATATGGGAAAAAACCAGAGCAGGTGATAAGAGAGGGAAGAGAAGACAAAAGATTATAAAGGCAAAAAATAGTTCTATTCCCAAATTTGTCCTTATGCTCAATGAAGCTTACAACGATGCCATTGTTGACCCCGCGCTTAGTGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTTTGAATGGCTTTGAAAGTACTCATGTACTGCTCTTCCGCTTCAGATGGTGCCCATGCCTAGAGTCTGAGCCTTTGGAGCGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTAGGACACTGTCTGGTCTGCTCGATGTTAATGTCGATGGTGGTGGCGGCGTCGATGCCGACGCCAGTGGTTTGAGAAGAAGAATCGTCCTTTAG

mRNA sequence

ATGATAGAGCCACTTAAATCGCTTCAAAAACCTTTGGCTGTGATTCCGGCCAAGGTTTTGACGAACATTGTTATATGGGAAAAAACCAGAGCAGGTGATAAGAGAGGGAAGAGAAGACAAAAGATTATAAAGGCAAAAAATAGTTCTATTCCCAAATTTGTCCTTATGCTCAATGAAGCTTACAACGATGCCATTGTTGACCCCGCGCTTAGTGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTTTGAATGGCTTTGAAAGTACTCATGTACTGCTCTTCCGCTTCAGATGGTGCCCATGCCTAGAGTCTGAGCCTTTGGAGCGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTAGGACACTGTCTGGTCTGCTCGATGTTAATGTCGATGGTGGTGGCGGCGTCGATGCCGACGCCAGTGGTTTGAGAAGAAGAATCGTCCTTTAG

Coding sequence (CDS)

ATGATAGAGCCACTTAAATCGCTTCAAAAACCTTTGGCTGTGATTCCGGCCAAGGTTTTGACGAACATTGTTATATGGGAAAAAACCAGAGCAGGTGATAAGAGAGGGAAGAGAAGACAAAAGATTATAAAGGCAAAAAATAGTTCTATTCCCAAATTTGTCCTTATGCTCAATGAAGCTTACAACGATGCCATTGTTGACCCCGCGCTTAGTGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTTTGAATGGCTTTGAAAGTACTCATGTACTGCTCTTCCGCTTCAGATGGTGCCCATGCCTAGAGTCTGAGCCTTTGGAGCGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTAGGACACTGTCTGGTCTGCTCGATGTTAATGTCGATGGTGGTGGCGGCGTCGATGCCGACGCCAGTGGTTTGAGAAGAAGAATCGTCCTTTAG

Protein sequence

MIEPLKSLQKPLAVIPAKVLTNIVIWEKTRAGDKRGKRRQKIIKAKNSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFESTHVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASGLRRRIVL
Homology
BLAST of CmUC04G068850 vs. NCBI nr
Match: KAG6596920.1 (Protein phosphatase 2C 29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030196.1 Protein phosphatase 2C 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.4 bits (285), Expect = 8.6e-22
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +
Sbjct: 103 NSSIPRSVLMLDAVYDDA-TDTALGACGGGCGVRGSILNGFESTSSFTALPLQTVPRGGT 162

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Sbjct: 163 EPLERGGFFLSGPIERGVLSGPLDANVDGAGAASAGSGG 200

BLAST of CmUC04G068850 vs. NCBI nr
Match: XP_022937431.1 (protein phosphatase 2C 29-like [Cucurbita moschata])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +
Sbjct: 103 NSSIPRSVLMLDAVYDDA-TDTALGACGGGCGVRGSILNGFESTSSFTALPLQTVPRGGT 162

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Sbjct: 163 EPLERGGFFLSGPIERGVLSGPLDANVDGAGAAAAGSGG 200

BLAST of CmUC04G068850 vs. NCBI nr
Match: XP_023520895.1 (protein phosphatase 2C 29-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +
Sbjct: 103 NSSIPRSVLMLDAVYDDA-TDTALGACGGGCGVRGSILNGFESTSSFTALPLQTVPRGGT 162

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Sbjct: 163 EPLERGGFFLSGPIERGVLSGPLDANVDGAGAAAAGSGG 200

BLAST of CmUC04G068850 vs. NCBI nr
Match: XP_023005298.1 (protein phosphatase 2C 29-like [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +
Sbjct: 103 NSSIPRSVLMLDAVYDDA-TDTALGACGGGCGVRGSILNGFESTSSFTALPLQTVPRGGT 162

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Sbjct: 163 EPLERGGFFLSGPIERGVLSGPLDANVDGAGAAAAGSGG 200

BLAST of CmUC04G068850 vs. NCBI nr
Match: XP_023007705.1 (protein phosphatase 2C 29-like [Cucurbita maxima])

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-21
Identity = 61/99 (61.62%), Postives = 67/99 (67.68%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ V M++  Y+DA  D AL A G GCGVRGSILNGFEST        +  P   +
Sbjct: 104 NSSIPRSVFMVDSVYDDA-TDTALGACGSGCGVRGSILNGFESTSSFTALPLQPVPRGGT 163

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDGGGG    A G
Sbjct: 164 EPLERGGFFLSGPIERGALSGPLDANVDGGGGCGGGAGG 201

BLAST of CmUC04G068850 vs. ExPASy Swiss-Prot
Match: O82302 (Protein phosphatase 2C 29 OS=Arabidopsis thaliana OX=3702 GN=PLL1 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-05
Identity = 37/85 (43.53%), Postives = 46/85 (54.12%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSIL--NGFESTHVLLFRFRWCPCLE 106
           N+S  K VL L + Y+DA      + S  G GVR S++  NGFE T      F   P L+
Sbjct: 110 NTSNSKTVLQLEDIYDDA------TESSFGGGVRRSVVNANGFEGTS----SFSALP-LQ 169

Query: 107 SEPLERGGFFLSGPIERRTLSGLLD 130
             P +R G F+SGPIER   SG LD
Sbjct: 170 PGP-DRSGLFMSGPIERGATSGPLD 182

BLAST of CmUC04G068850 vs. ExPASy TrEMBL
Match: A0A6J1L1S8 (protein phosphatase 2C 29-like OS=Cucurbita maxima OX=3661 GN=LOC111498340 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.1e-22
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +
Sbjct: 103 NSSIPRSVLMLDAVYDDA-TDTALGACGGGCGVRGSILNGFESTSSFTALPLQTVPRGGT 162

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Sbjct: 163 EPLERGGFFLSGPIERGVLSGPLDANVDGAGAAAAGSGG 200

BLAST of CmUC04G068850 vs. ExPASy TrEMBL
Match: A0A6J1FAB7 (protein phosphatase 2C 29-like OS=Cucurbita moschata OX=3662 GN=LOC111443820 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.1e-22
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +
Sbjct: 103 NSSIPRSVLMLDAVYDDA-TDTALGACGGGCGVRGSILNGFESTSSFTALPLQTVPRGGT 162

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Sbjct: 163 EPLERGGFFLSGPIERGVLSGPLDANVDGAGAAAAGSGG 200

BLAST of CmUC04G068850 vs. ExPASy TrEMBL
Match: A0A6J1L3Q7 (protein phosphatase 2C 29-like OS=Cucurbita maxima OX=3661 GN=LOC111500235 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21
Identity = 61/99 (61.62%), Postives = 67/99 (67.68%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ V M++  Y+DA  D AL A G GCGVRGSILNGFEST        +  P   +
Sbjct: 104 NSSIPRSVFMVDSVYDDA-TDTALGACGSGCGVRGSILNGFESTSSFTALPLQPVPRGGT 163

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDGGGG    A G
Sbjct: 164 EPLERGGFFLSGPIERGALSGPLDANVDGGGGCGGGAGG 201

BLAST of CmUC04G068850 vs. ExPASy TrEMBL
Match: A0A6J1E5P7 (protein phosphatase 2C 29-like OS=Cucurbita moschata OX=3662 GN=LOC111431015 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-21
Identity = 61/99 (61.62%), Postives = 67/99 (67.68%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ V M++  Y+DA  D AL A G GCGVRGSILNGFEST        +  P   +
Sbjct: 104 NSSIPRSVFMVDSVYDDA-TDTALGACGSGCGVRGSILNGFESTSSFTALPLQPVPRGGT 163

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVDGGGG  A   G
Sbjct: 164 EPLERGGFFLSGPIERGALSGPLDANVDGGGGGGAGGGG 201

BLAST of CmUC04G068850 vs. ExPASy TrEMBL
Match: A0A5D3CJN1 (Protein phosphatase 2C 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001760 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 6.7e-20
Identity = 60/99 (60.61%), Postives = 65/99 (65.66%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLES 106
           NSSIP+ VLML+  Y+DA  D AL AS GGCGVRGSILNGFEST        +  P   +
Sbjct: 106 NSSIPRSVLMLDAVYDDA-TDTALGASAGGCGVRGSILNGFESTSSFTALPLQPVPRGGT 165

Query: 107 EPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG 145
           EPLERGGFFLSGPIER  LSG LD NVD      A   G
Sbjct: 166 EPLERGGFFLSGPIERGALSGPLDANVDAAAAAAAAGGG 203

BLAST of CmUC04G068850 vs. TAIR 10
Match: AT2G35350.1 (poltergeist like 1 )

HSP 1 Score: 48.9 bits (115), Expect = 4.1e-06
Identity = 37/85 (43.53%), Postives = 46/85 (54.12%), Query Frame = 0

Query: 47  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSIL--NGFESTHVLLFRFRWCPCLE 106
           N+S  K VL L + Y+DA      + S  G GVR S++  NGFE T      F   P L+
Sbjct: 110 NTSNSKTVLQLEDIYDDA------TESSFGGGVRRSVVNANGFEGTS----SFSALP-LQ 169

Query: 107 SEPLERGGFFLSGPIERRTLSGLLD 130
             P +R G F+SGPIER   SG LD
Sbjct: 170 PGP-DRSGLFMSGPIERGATSGPLD 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6596920.18.6e-2262.63Protein phosphatase 2C 29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7... [more]
XP_022937431.11.5e-2162.63protein phosphatase 2C 29-like [Cucurbita moschata][more]
XP_023520895.11.5e-2162.63protein phosphatase 2C 29-like [Cucurbita pepo subsp. pepo][more]
XP_023005298.11.5e-2162.63protein phosphatase 2C 29-like [Cucurbita maxima][more]
XP_023007705.13.3e-2161.62protein phosphatase 2C 29-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O823025.8e-0543.53Protein phosphatase 2C 29 OS=Arabidopsis thaliana OX=3702 GN=PLL1 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1L1S87.1e-2262.63protein phosphatase 2C 29-like OS=Cucurbita maxima OX=3661 GN=LOC111498340 PE=4 ... [more]
A0A6J1FAB77.1e-2262.63protein phosphatase 2C 29-like OS=Cucurbita moschata OX=3662 GN=LOC111443820 PE=... [more]
A0A6J1L3Q71.6e-2161.62protein phosphatase 2C 29-like OS=Cucurbita maxima OX=3661 GN=LOC111500235 PE=4 ... [more]
A0A6J1E5P72.7e-2161.62protein phosphatase 2C 29-like OS=Cucurbita moschata OX=3662 GN=LOC111431015 PE=... [more]
A0A5D3CJN16.7e-2060.61Protein phosphatase 2C 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
Match NameE-valueIdentityDescription
AT2G35350.14.1e-0643.53poltergeist like 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC04G068850.1CmUC04G068850.1mRNA