CmUC04G068550 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G068550
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Enzymatic polyprotein
Location	CmU531Chr04: 2159458 .. 2161602 (-)
RNA-Seq Expression	CmUC04G068550
Synteny	CmUC04G068550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCAGTCGAGCCTAGTAAGCTTCCTAATCCCTAAGTTCAATACATTTGGGTACTTTGGAGATCAAACCCCTGTATATTTTTTTGAAACCTAACTTGTGTTATCGTTGTTTTGTTCTAAAAATCTAAACTATATACCGACCTATTTTCATTGAACTTACAAAATGTTTTTGAAGTTTTCAATTCGTATTTGAGGGTATATTTTCGATTGTAACTTCATTCTTGAACACATGAGTTTCGATTTCAACAATAAAGTCGTCGATTCTGATATGCAAGATTTATTTCAATTAGTAGTGATTTCTTGGTATAATAACATATTTTGTTTCTTCAACACATGAGTACAACTCCATATATATTTCAATTTTTAGAGATTTATATGTCGTGTATGTTAAATGTGCAATGCATATTTGTATATTTTTAGGGATTTCTTGGCTAAATTACAGAGTTCTACATCGTGTATATTAAATATGTCAGTTTATATTTGTATGATGAACAAGTACAATTCCACATATACTGCCTTATGTGGCTAAAATACTGTCTATAACTCTGACTTGTCTATATTGGTTTATGGATAATATGCAACTGATAATGAACTTAATAATTTGAGGATTGGATTATGTTTAGTGGGTACATGTAGCACATAATGATTGTATATACTAATGTGTATATGCTATATGTTGTATGAATGGATCAGAAACATTCTAAGAAATGGCTCCTGTAATAATACCAAATCTTGGTTCTTGAAGTAGACCAATATATATTCCATGCAATGAGGGACCACCTATAATAAATACAAAGGTACTTTAGTAGTTTGTTTGAAATCAAAATTGGAATTTACTTTAGCAATTTGTAATTAAATAATTCATTGTATATTTGTAGGATGAACAAGTACATATCCAACCAAATATAGAAGAAAATGAGCAGGACCAAGTAGAGACGCAAATTATGTTCATCAACCTGACATTGTAAAAGAAACACCTAAAGAAGAAATGGTATTGACTATCTCCAATCTCAAACATGTGTAGGACAATGTGATGATATTCTTGTCTTTGAGAGATCTTGCAATTGAACTAGACAGGTCCATGTTCTAAATTTGATTCAACAATCCCCAATAGAGATAGAGTGAAATTGAACATCTCTCTTATCTCTTAGAGCCTGATAGACACGAACATCTAGTCCTCTCAACTTTGGTTTTAGAGCAACTTGAACCCATTCAATATGGAGATATTTGAAGTTCTCTCTAGCTTGGAAGAGAGTTTCTCCTGGAAAAGGTTGATTTAAGTGAATTCATCGTTCATCTCGACATTCTACTCAGTGATGACAATTACATCAGTTCTGAGAGAAATTAAAAGTATTGATTTTGTAGACTTGATTTGGAACTCTATCTCCAACGCAATCTCGATATGGAAAGGAGATCTGGACCCATTTATAATCAAATCATTGTTCTCGCAGTCAAGACTTGAGAACAAAGATATGCTTGAAAATATGATGAGTACATTGATGATTATATTGCCCAACCAAAAGAGTCAAGGGGCAAGTTTATATTAAAAAAAGACTTCCTTGAACGAATAAAAACAGAAGAAGCATCTCAAAGGAGTATCCGCCAGAAGAGGAAAATTCTATTTCCTTCATTCTGTTGTCCTAGCCATCAAAGCCATCAAGATGGTATCCTCTCCTTACAAGATAATAGACGAGGAGAAAGTTCAGAAAGTCATCCAACAACAACCAAATTATTCAAACAAAACATGAAGCTAGCCTAGTTGGCCATATAGCACTGGAAAATTGTGCTGGCAACAGTTCATATCTTAATTTTCGGATTCATTGGAAATTTAAGAAGTTGGTGGCATAATCAGTTAAGTAAGCATGGTAGAAATGGTATTCTCACAGCAGGTACAGTCAAGTAAGAAGGCAATCCAACTACTGGAGTTGCTCTGATGGAAACAACCAGTGAACAACCAGATATGGTAAATTAGCTGATCTATACTTGTACATAACACTTTATAGGTCCAACTGTTTTATACCGCAATCAAGCAACTGAGTCTCTACTAAGAATGAGATGCAGAAAGATAAGTGATTTCAAGTGGTACAAAGACATCTTCATGGCACGTCTTTACAACCTTACATCCTATGGAGAAGATATCTAG

mRNA sequence

ATGATGCAGTCGAGCCTAGTAAGCTTCCTAATCCCTAAGTTCAATACATTTGGGTACTTTGGAGATCAAACCCCTGATGAACAAGTACATATCCAACCAAATATAGAAGAAAATGAGCAGGACCAAGTAGAGACGCAAATTATGTTCATCAACCTGACATTCCATCAAAGCCATCAAGATGGTATCCTCTCCTTACAAGATAATAGACGAGGAGAAAGTTCAGAAATTCATATCTTAATTTTCGGATTCATTGGAAATTTAAGAAGTTGGTGGCATAATCAGTTAAGTAAGCATGGTAGAAATGGTATTCTCACAGCAGGTCCAACTGTTTTATACCGCAATCAAGCAACTGAGTCTCTACTAAGAATGAGATGCAGAAAGATAAGTGATTTCAAGTGGTACAAAGACATCTTCATGGCACGTCTTTACAACCTTACATCCTATGGAGAAGATATCTAG

Coding sequence (CDS)

ATGATGCAGTCGAGCCTAGTAAGCTTCCTAATCCCTAAGTTCAATACATTTGGGTACTTTGGAGATCAAACCCCTGATGAACAAGTACATATCCAACCAAATATAGAAGAAAATGAGCAGGACCAAGTAGAGACGCAAATTATGTTCATCAACCTGACATTCCATCAAAGCCATCAAGATGGTATCCTCTCCTTACAAGATAATAGACGAGGAGAAAGTTCAGAAATTCATATCTTAATTTTCGGATTCATTGGAAATTTAAGAAGTTGGTGGCATAATCAGTTAAGTAAGCATGGTAGAAATGGTATTCTCACAGCAGGTCCAACTGTTTTATACCGCAATCAAGCAACTGAGTCTCTACTAAGAATGAGATGCAGAAAGATAAGTGATTTCAAGTGGTACAAAGACATCTTCATGGCACGTCTTTACAACCTTACATCCTATGGAGAAGATATCTAG

Protein sequence

MMQSSLVSFLIPKFNTFGYFGDQTPDEQVHIQPNIEENEQDQVETQIMFINLTFHQSHQDGILSLQDNRRGESSEIHILIFGFIGNLRSWWHNQLSKHGRNGILTAGPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI

Homology

[Close]

BLAST of CmUC04G068550 vs. NCBI nr
Match: KAA0037876.1 (zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-14
Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 497 ILILGFNGNLRSWWHNLLTEQDRQQILTATRTVVKTENTSTPIQVEEPDMVNQLLYTMTK 556

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LLR++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 557 HFIGSTQIHLNLATEALLRLKCHKMSRYKWYKDTFMARLYTLTTCGADI 605

[Close]

BLAST of CmUC04G068550 vs. NCBI nr
Match: KAA0058433.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYJ96695.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-14
Identity = 46/96 (47.92%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 63  LSLQDNRRGESSEIHILIFGFIGNLRSWWHNQLSKHGRNGILTAGPTVLYRNQAT----- 122
           +S    R+      HILI GF  NLRSWWHNQL++  R  ILTA  TV+    A+     
Sbjct: 54  VSAYSARKSTLETTHILILGFTANLRSWWHNQLTEPDRYRILTATKTVVKTENASTPIQV 113

Query: 123 -ESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
            E  +  +C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 114 EEPDMVNQCHKMSRYKWYKDTFMARLYTLTTCGADI 149

[Close]

BLAST of CmUC04G068550 vs. NCBI nr
Match: TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-13
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 685 ILILGFNGNLRSWWHNLLTEQDRQRILTATRTVVKTENTSTPIQVEEPDMVNQLLYTMTK 744

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LL ++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 745 HFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGADI 793

[Close]

BLAST of CmUC04G068550 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-13
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 576 ILILGFNGNLRSWWHNLLTEQDRQRILTATRTVVKTENSSTPIQVEEPDMVNQLLYTMTK 635

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LL ++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 636 HFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGADI 684

[Close]

BLAST of CmUC04G068550 vs. NCBI nr
Match: KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-13
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 685 ILILGFNGNLRSWWHNLLTEQDRQRILTATRTVVKTENTSTPIQVEEPDMVNQLLYTMTK 744

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LL ++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 745 HFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGADI 793

[Close]

BLAST of CmUC04G068550 vs. ExPASy TrEMBL
Match: A0A5A7URD4 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G00110 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-14
Identity = 46/96 (47.92%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 63  LSLQDNRRGESSEIHILIFGFIGNLRSWWHNQLSKHGRNGILTAGPTVLYRNQAT----- 122
           +S    R+      HILI GF  NLRSWWHNQL++  R  ILTA  TV+    A+     
Sbjct: 54  VSAYSARKSTLETTHILILGFTANLRSWWHNQLTEPDRYRILTATKTVVKTENASTPIQV 113

Query: 123 -ESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
            E  +  +C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 114 EEPDMVNQCHKMSRYKWYKDTFMARLYTLTTCGADI 149

[Close]

BLAST of CmUC04G068550 vs. ExPASy TrEMBL
Match: A0A5A7T6R6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00430 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-14
Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 497 ILILGFNGNLRSWWHNLLTEQDRQQILTATRTVVKTENTSTPIQVEEPDMVNQLLYTMTK 556

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LLR++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 557 HFIGSTQIHLNLATEALLRLKCHKMSRYKWYKDTFMARLYTLTTCGADI 605

[Close]

BLAST of CmUC04G068550 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-13
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 576 ILILGFNGNLRSWWHNLLTEQDRQRILTATRTVVKTENSSTPIQVEEPDMVNQLLYTMTK 635

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LL ++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 636 HFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGADI 684

[Close]

BLAST of CmUC04G068550 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-13
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 685 ILILGFNGNLRSWWHNLLTEQDRQRILTATRTVVKTENTSTPIQVEEPDMVNQLLYTMTK 744

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LL ++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 745 HFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGADI 793

[Close]

BLAST of CmUC04G068550 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-13
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 78  ILIFGFIGNLRSWWHNQLSKHGRNGILTA------------------------------- 137
           ILI GF GNLRSWWHN L++  R  ILTA                               
Sbjct: 685 ILILGFNGNLRSWWHNLLTEQDRQRILTATRTVVKTENTSTPIQVEEPDMVNQLLYTMTK 744

Query: 138 ---GPTVLYRNQATESLLRMRCRKISDFKWYKDIFMARLYNLTSYGEDI 153
              G T ++ N ATE+LL ++C K+S +KWYKD FMARLY LT+ G DI
Sbjct: 745 HFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGADI 793

The following BLAST results are available for this feature:

BLAST of CmUC04G068550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037876.1	3.9e-14	44.04	zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var...	[more]
KAA0058433.1	3.9e-14	47.92	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYJ96695.1 Enzymatic polyprote...	[more]
TYJ97599.1	2.5e-13	43.12	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0057417.1	2.5e-13	43.12	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote...	[more]
KAA0056776.1	2.5e-13	43.12	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of CmUC04G068550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC04G068550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URD4	1.9e-14	47.92	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold53...	[more]
A0A5A7T6R6	1.9e-14	44.04	Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v...	[more]
A0A5A7URX9	1.2e-13	43.12	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21...	[more]
A0A5D3BEY3	1.2e-13	43.12	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]
A0A5A7UR29	1.2e-13	43.12	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]

BLAST of CmUC04G068550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G068550.1	CmUC04G068550.1	mRNA