CmUC04G068540 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAGCTTTTCACTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCCTGCTCCTGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA ATGGCAAAGCTTTTCACTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCCTGCTCCTGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA ATGGCAAAGCTTTTCACTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCCTGCTCCTGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH Homology
BLAST of CmUC04G068540 vs. NCBI nr
Match: KAG6769237.1 (hypothetical protein POTOM_024855 [Populus tomentosa]) HSP 1 Score: 61.2 bits (147), Expect = 4.0e-06 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of CmUC04G068540 vs. NCBI nr
Match: KAG6743831.1 (hypothetical protein POTOM_052534 [Populus tomentosa]) HSP 1 Score: 60.1 bits (144), Expect = 8.9e-06 Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CmUC04G068540 vs. NCBI nr
Match: PNS97967.1 (hypothetical protein POPTR_016G052400 [Populus trichocarpa]) HSP 1 Score: 58.5 bits (140), Expect = 2.6e-05 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of CmUC04G068540 vs. NCBI nr
Match: PNS97965.1 (hypothetical protein POPTR_016G052200 [Populus trichocarpa]) HSP 1 Score: 58.2 bits (139), Expect = 3.4e-05 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmUC04G068540 vs. NCBI nr
Match: KAG6744821.1 (hypothetical protein POTOM_051461 [Populus tomentosa]) HSP 1 Score: 58.2 bits (139), Expect = 3.4e-05 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmUC04G068540 vs. ExPASy TrEMBL
Match: A0A2K1XB04 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G052400 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of CmUC04G068540 vs. ExPASy TrEMBL
Match: U5FKQ0 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G052200 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-05 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmUC04G068540 vs. ExPASy TrEMBL
Match: A0A4U5NMG4 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000261490 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-05 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmUC04G068540 vs. ExPASy TrEMBL
Match: U7DW91 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G056000 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of CmUC04G068540 vs. ExPASy TrEMBL
Match: A9P8U7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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