CmUC04G068520 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G068520
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	40S ribosomal protein S25
Location	CmU531Chr04: 2123844 .. 2126771 (+)
RNA-Seq Expression	CmUC04G068520
Synteny	CmUC04G068520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTGACCAATAGTCATTAACCAAGAAACCCTAGACTTGTATTTTCATCCGCTCTGAGCTCTAGCCGGCAGCAAGAGTTCTTCGCCTCTATACAGCGACCTTCTGCTCTGTCTTCCACCCAAATTCTCAGCCCCAAACCCACCCAACATGGTATGTTATTTCTTCAAAACCCTTTTAAATTCTCTTCTTCTTCCTTGTATTACTCTGTTTTCCCTGTGGAATCGAGTAAGGCTAGTGTAGAATTCCCTTCTGAAGTACTGCAATTTTTCTCCATTGTTATTCTGTAGTTTAAGCTATGCTAGATTTTGGTTTTCTGAAAGTTACCGAGATAAGCCGTTATTGTTTGAGTTCGTCGTTCTATACCACTATTCTTTACTGGAAATCAAAGCAAAATTGACTAAATTTTTAGCCTTAAAGTTGCGGAATCAGTTGAATTGGACTGCTGAACGGCAGTGAAGTTATTTTGTTTTCTCTCTTGGATCTTAAATGTAGCTAAGATGGTTGTTCTGTCATTGGATAATGTATTATGACGGTTTCTCCGTTTCAGTTGTCCATATGTGATTGTGAGGTCTAAGGGGTAAATGTACGAGTAATGATATTACTTAAGTGGAAAAGATGGGAAGGTCTTTGTGTTATGTGATTTATGAATTCAGTAATGTAAACTTTCTCCTACTTGGTATCCATATGGCAGGCACCTAAGAAGGAAAAGGCTCCTCCTCCGTCTTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTAATTCATTATGTGATAGGCTGTTTTCTCTTTGAAGTTTAGGCTTTGTTTGATAATCATTTTGTTCGTGAAAGTTAAATTTTATAAACTGCAGTTCTATCTATAAACTTAATTGTTTTGTTACCTACTTATTTTAACATGTTTTCAAAATTCAATCCAATATGTGAAAACTAAACAATATGACCTTCAATCTATGGGTTTTCTTGGTATGATATAAACTTTTTAAAGATGTTTTTTAAAAGCCAAACCAAGTTTTGAAAACTATAAAATAGTTTTTAAAAGCTTTTTTTCTTTTTGGAAATTTGGCAATGAATTAAAATGTTTTTTTTTTATAAAAGATGAAAACTATTGTAGAGAAATTATGAGAAAATAAGCCCAATTTTCAAAAGCCAAAAACAAAAAACCAAATAGTTATCAAAAGAGGCCGTTGTGTTTCTAAAATTTGGTTTTGGAATTTAGAATTTGGGTGTTTCTTCATCGGTTTGATGCCATGTCGTGGATAGCTCAATGGTGGTGACTGACGATGCTATGATTGAACCAAAAACGAGTTATGAATTTGTTCATCTTTTTTATCCATAGATTTACAGAGCCATTTTGTGTGATTACATTTTTATTTTCTTTCCAAATTAGGTTGTTTTTCATAGTAAAAGTAAAGAAATGGTAAGGATACTTACACAATTTTAAAAAATTGGAAACTAAAAACAAAATGGTTGTCAAAAGAAGTCTTAGTGATTAGCAGTCTAGTGAGAATTCAGGTACATCTTTGATGCCTGTTACTGGTTAGTTTGATGAATGCTTTTGTAAATCTTACATTGTTACCATTAATTGTGTAAGTTTAATTCTTATTTTGTTTATTGCTCAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTCTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCGTCCATCCTTTCAGATAGATTAAGGGTATGGCTTGCTCAATCCCATTTGGCTTGCATCTTCACATGTTATAAATGCATGTCTTTTGATTGTGAAATATGGACTATGTTTCTTAATTTTTGTTTGAAATTTGTGTGCCTCGCACTACTTTACCCTTCAAACCCATCCTTAAAAATGGAATGGAAAAGAAATGGTGGTGGGTGATATAGGTTGAGCTTTCTTTCTCTGTTGTTATGAACTCCATTGTATGATAATCACATGATTTGAAATCTATGTCAAAGACTGCATATACTATAGTGGTATATATCGAACTCTATTTGTTAAATCTTCATTTAGTTAAATATGACATTGTATTTTTATATCCTCTGCTTCCCAAGCACGTGATCGGATTCGCTCCAGGGATGACTCAAATTACAGTTGCATAGTTTATGTATTGCAAATTACATTTTGATAATTTCTCTCCTGCTTTTACCTACCATATTCCAAATGTGTCGTAGATGCTGCAGCACTCCCATTTTTAAACTACGTATGTATCCATATGGTTAACACAGTTACAAAGTAATCTCTTTCAGTTTGATGTCATGTAAGCTCGGTGTTATATTATATTAATCCATGTGAGGATAAACAATTCTTCAACCACTTGAACTCACATTATTAAACCATAAGAGTAGGGTACCTTTTGTAACTATCACTTGATGTGAAGTATCTGATATGTTTCCTTTTTCTACAAGTGAAATTTTCTTTGGTTAGGATATCATTCCTGTGACTGATTCTATTTGGATGGATTGTTATGAAGATGTTTGTTGTTCTTTACTGTTCATCAGATCAATGGATCGTTGGCACGTCGGGCGATTAGGGATTTAATGGCAAGAGGTTCTATTAGGCTCGTATCTGCTCATTCTAGCCAGCAAATATACACTAGAGCCACTAATACATGATCAAAGGGTTGCCATTTGAAAGAGGAACGTCTTGTTATTTTGGTCAGCATCTTGTCATGAACTAATATCTATGATTTTGAATATTGGCATGTTGCATTGAGAACTCTGATTTTAAATTCTTATATGTGGTTTAGCAATTCCTCTATCTCAAGTTCTCTAAATTGAAACAAATGCTCATAACCTAATTGGCATACGGTTTCAAATAATACTATCAACCTTGAGGTCATATTGCTAAGAAAGATCAAATTATAAT

mRNA sequence

GAATTGACCAATAGTCATTAACCAAGAAACCCTAGACTTGTATTTTCATCCGCTCTGAGCTCTAGCCGGCAGCAAGAGTTCTTCGCCTCTATACAGCGACCTTCTGCTCTGTCTTCCACCCAAATTCTCAGCCCCAAACCCACCCAACATGGCACCTAAGAAGGAAAAGGCTCCTCCTCCGTCTTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTCTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCGTCCATCCTTTCAGATAGATTAAGGATCAATGGATCGTTGGCACGTCGGGCGATTAGGGATTTAATGGCAAGAGGTTCTATTAGGCTCGTATCTGCTCATTCTAGCCAGCAAATATACACTAGAGCCACTAATACATGATCAAAGGGTTGCCATTTGAAAGAGGAACGTCTTGTTATTTTGGTCAGCATCTTGTCATGAACTAATATCTATGATTTTGAATATTGGCATGTTGCATTGAGAACTCTGATTTTAAATTCTTATATGTGGTTTAGCAATTCCTCTATCTCAAGTTCTCTAAATTGAAACAAATGCTCATAACCTAATTGGCATACGGTTTCAAATAATACTATCAACCTTGAGGTCATATTGCTAAGAAAGATCAAATTATAAT

Coding sequence (CDS)

ATGGCACCTAAGAAGGAAAAGGCTCCTCCTCCGTCTTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTCTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCGTCCATCCTTTCAGATAGATTAAGGATCAATGGATCGTTGGCACGTCGGGCGATTAGGGATTTAATGGCAAGAGGTTCTATTAGGCTCGTATCTGCTCATTCTAGCCAGCAAATATACACTAGAGCCACTAATACATGA

Protein sequence

MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT

Homology

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BLAST of CmUC04G068520 vs. NCBI nr
Match: XP_008442240.1 (PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 5.5e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAI+DLMARGSIRL+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. NCBI nr
Match: XP_004291591.1 (PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAI+DLMARGSIR++SAH+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. NCBI nr
Match: GAV70343.1 (Ribosomal_S25 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PK+KL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAIRDLMARGSIR++SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. NCBI nr
Match: KAG9444381.1 (hypothetical protein H6P81_015721 [Aristolochia fimbriata])

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PK+KL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAIRDLMARGSIRLVS+H+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSSHASQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. NCBI nr
Match: AFK40360.1 (unknown [Lotus japonicus] >AFK49558.1 unknown [Lotus japonicus])

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46
Identity = 103/108 (95.37%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLR+NGSLARRAIR+LMARGSIR+VSAH+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRVNGSLARRAIRELMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-47
Identity = 100/108 (92.59%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIR+LMA+G IR+VSAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 1.3e-46
Identity = 99/107 (92.52%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATN 108
           ITPSILSDRLRINGSLARRAIR+LMA+G+IR+VSAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of CmUC04G068520 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46
Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIR+LMA+G IR+V+AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.2e-46
Identity = 98/108 (90.74%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSEAPK+KL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPS+LSDRLRI+GSLAR+AIRDLMARGSIR+VSAH+SQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SEAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRAT 107
           ITPSILSDRLRINGSLAR+AIRDLM +G+IR+VS HSSQQI TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]

BLAST of CmUC04G068520 vs. ExPASy TrEMBL
Match: A0A1S3B608 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103486154 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAI+DLMARGSIRL+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy TrEMBL
Match: A0A2N9J628 (40S ribosomal protein S25 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59693 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAIRDLMARGSIR+VS HSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRMVSTHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy TrEMBL
Match: A0A1Q3BRK1 (40S ribosomal protein S25 OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13841 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.0e-47
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PK+KL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAIRDLMARGSIR++SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy TrEMBL
Match: I3TAL6 (40S ribosomal protein S25 OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 103/108 (95.37%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLR+NGSLARRAIR+LMARGSIR+VSAH+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRVNGSLARRAIRELMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. ExPASy TrEMBL
Match: A0A6J1CLE7 (40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111012531 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 103/108 (95.37%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSEAPK+KL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDRLRINGSLARRAI+DLMARGSIRL+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-48
Identity = 100/108 (92.59%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIR+LMA+G IR+VSAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 186.8 bits (473), Expect = 9.1e-48
Identity = 99/107 (92.52%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATN 108
           ITPSILSDRLRINGSLARRAIR+LMA+G+IR+VSAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of CmUC04G068520 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-47
Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIR+LMA+G IR+V+AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of CmUC04G068520 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 183.7 bits (465), Expect = 7.7e-47
Identity = 99/108 (91.67%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIR+LMA+G IR+VSAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]

BLAST of CmUC04G068520 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 180.3 bits (456), Expect = 8.5e-46
Identity = 97/108 (89.81%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKL 60
           MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIRDLMARGSIRLVSAHSSQQIYTRATNT 109
           ITPSILSDR+RINGSLARRAIR+LMA+G IR+V+AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:

BLAST of CmUC04G068520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442240.1	5.5e-47	97.22	PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]	[more]
XP_004291591.1	9.5e-47	96.30	PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca]	[more]
GAV70343.1	1.2e-46	96.30	Ribosomal_S25 domain-containing protein [Cephalotus follicularis]	[more]
KAG9444381.1	2.7e-46	96.30	hypothetical protein H6P81_015721 [Aristolochia fimbriata]	[more]
AFK40360.1	2.7e-46	95.37	unknown [Lotus japonicus] >AFK49558.1 unknown [Lotus japonicus]	[more]

BLAST of CmUC04G068520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIK2	1.5e-47	92.59	40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1	[more]
Q8GYL5	1.3e-46	92.52	40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2	[more]
Q9T029	1.7e-46	90.74	40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1	[more]
P46301	2.2e-46	90.74	40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1	[more]
Q9SIW5	2.0e-44	89.62	40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3	[more]

BLAST of CmUC04G068520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B608	2.7e-47	97.22	40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103486154 PE=3 SV=1	[more]
A0A2N9J628	4.6e-47	97.22	40S ribosomal protein S25 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59693 PE=3 SV=...	[more]
A0A1Q3BRK1	6.0e-47	96.30	40S ribosomal protein S25 OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13841 PE...	[more]
I3TAL6	1.3e-46	95.37	40S ribosomal protein S25 OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
A0A6J1CLE7	1.3e-46	95.37	40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111012531 PE=3 SV...	[more]

BLAST of CmUC04G068520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21580.1	1.1e-48	92.59	Ribosomal protein S25 family protein	[more]
AT4G34555.1	9.1e-48	92.52	Ribosomal protein S25 family protein	[more]
AT4G39200.1	1.2e-47	90.74	Ribosomal protein S25 family protein	[more]
AT2G21580.2	7.7e-47	91.67	Ribosomal protein S25 family protein	[more]
AT4G39200.2	8.5e-46	89.81	Ribosomal protein S25 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 7..105 e-value: 7.1E-42 score: 141.7
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	40S RIBOSOMAL PROTEIN S25	coord: 2..108
None	No IPR available	GENE3D	3.30.63.20		coord: 21..108 e-value: 2.3E-41 score: 141.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR12850:SF31	BNAA04G12260D PROTEIN	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G068520.1	CmUC04G068520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome