CmUC04G067860 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G067860
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein of unknown function (DUF1138)
Location	CmU531Chr04: 189842 .. 192031 (+)
RNA-Seq Expression	CmUC04G067860
Synteny	CmUC04G067860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAGAAGAAGGCAAAGACGAAACGTCTGGGAAAAGGGAAAGGACAAGAGAGAAAGCGAAAGGTTCAGAGAGAGCGAACCTTCAGGGTGAAATCGAAAGGGTCGGAGAGAAAGCGAAAGCAAAAGCGACAAGGTTGGAAGAGGGAAAATTGGGACGTTCAGTGAGAAAGCGGGAAATTTTGAGAGAGAAAGCGAAAGGTTGTGAGAGAAAGCGAAAGCGGAAAAGCATTCCAACGGGTAGGAGGCGACTTTTAAAGAAAAAATGGGAAGGCGCGTTTTGAGTTGTTTTAAGTTCGGGAGGGTAAAATTGGTATTTCACGTGTCCAAACGGTCACTTATGATAAAGTTTTCGGGAGTGGGTCATCTATAGATAAGTTTTTAGTTTTTGGGTCATTTCGTGCAATTTTCCCCATATCTCTCCTTCCCCTTCCAGCTTCTTCATTTTTTTCAATCTTTTTTTTTTTTTTTTTTTTATTTTCTCGATAAGATTCATTTTTTTCCAATCTGAGCTTCATCGCTTAGAAAATCGGCTCTTCATTCTGTACATCTATTTTCATCGGTATGTCTTTGTCTCTATCTCTCTATCCCTGATTGTTAACTGCTGGTTGTTTCTTTCTCTCAATTCAAATGGAATCTCATGGTGGAGGCTGTTGAAATGGGTAGTATCAGTGGAAAATAGAGGGATATGTTCACATGAATTTGTTGTTGTTATGCCACCATAATTTCTATTCTAGTTTGGGATTCCCTCTAATTGACTAATAGGTTATTGTTATTATGTCACTCCCGTTGGTTACTGTTCGTGCTTGCTTAATGGGTAATTTTGCTTTTGACTTGTGGAAAGTTTGTAGGTTTGTAATGGGATTTGTTCTCTGTTTTTTGAATTTGTGATTGTTAGGCTGGATTTTGAATATTTAATGATTTATTCATGGTTGTTTCGGCTGTAACTGTAAATTTTGTTACTAAATTACTTGAGCAAAACAGTGGTCATCCCCATTCAACCCAATTCTATGGGGATGGGATCGGTTTGCTAATTTGGTGTTAATTAGTGCTGTTAACTCTTGATTTATGTTGCTCTATTCTGTTTTACTGTGCTTTTCAATTTTCTTTTTTTCCTCCTTTCTTTGATGGACATGTATGCACTGTAAAGCTGCCTATATATTGCAGCCTCCTAGTCTGTTTTGGAATATATCAGAAAATACTCATTCGGCTTCTGCAGTCTTCTTCTTCTATCTGAATATTAGAATCCATGAAGTCTAGACGAGCATTCAGTCCAAAAAATAAAAATTGGGGTATGATCCAAGAATGGTGAACTCAGACACCATCTTGAAAGGCATGTTAGGGATCCCACATACCTCACAGTTTTTATAAGATAGAATGGCTACTCCTCTCTTTGTTATTAGTTTTGAGGTAGAACTCCGTATTATTTGATAATTGGAAAATTGATTACTTGCGGGCATTTTGGGTCTTGAATTGGCTTCAAATTGATTCTTCCCAAACCTATCCTTCATCCATCCTACATGCAAAATGAATCGTTCTTTTGGGTATATATTTCTAAGATTTTGGACACACTGATATGCCCATACACGAGACACACAAACACGTCAAAATTGTGCCCGCATTTTGGGCCTCACGGCCTAAATCTGAATCCTTTGTAAAAGCGGAAAGAAAAAACCTCAAATCGTAGACTATGTTACTGTTATCAATGTTGGAACTTGACTGAGAGATTTTTAATTCGTTTGGAACTTGTTTATGGTTTCTTAAATGGTTCAATTGATTTGGGAACATACTACATACTAGTCTATTGCAGTTAGAAGATGGCAGCAAAATACATAGTAGGTTCTTTGTTTGGAGCAGTTGCAGTTGCGTATATTTCTGACCACCTTGTTGCTGACAAGAAAATATTTGGAGGTAATTAGCAGTCATCATTTGCTTTCGTAGTTTCTTTGATGTGCTAGCTAGTTGCTACCCTTACTTTGCTTTGCTGTTTCTTTGATGTGCTACCATTGTCAGTTTCTTTTTAATGGATTTTGTTTCAGGAACAACCCCAAGTACTGTTTCAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATAGTCAAAACCCTCTCTGAAGCTTAA

mRNA sequence

ATGAAGAAGAGAAGAAGGCAAAGACGAAACGTCTGGGAAAAGGGAAAGGACAAGAGAGAAAGCGAAAGGTTCAGAGAGAGCGAACCTTCAGGATTCATTTTTTTCCAATCTGAGCTTCATCGCTTAGAAAATCGGCTCTTCATTCTGTACATCTATTTTCATCGTCTATTGCAGTTAGAAGATGGCAGCAAAATACATATTGCGTATATTTCTGACCACCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATAGTCAAAACCCTCTCTGAAGCTTAA

Coding sequence (CDS)

ATGAAGAAGAGAAGAAGGCAAAGACGAAACGTCTGGGAAAAGGGAAAGGACAAGAGAGAAAGCGAAAGGTTCAGAGAGAGCGAACCTTCAGGATTCATTTTTTTCCAATCTGAGCTTCATCGCTTAGAAAATCGGCTCTTCATTCTGTACATCTATTTTCATCGTCTATTGCAGTTAGAAGATGGCAGCAAAATACATATTGCGTATATTTCTGACCACCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATAGTCAAAACCCTCTCTGAAGCTTAA

Protein sequence

MKKRRRQRRNVWEKGKDKRESERFRESEPSGFIFFQSELHRLENRLFILYIYFHRLLQLEDGSKIHIAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTLSEA

Homology

[Close]

BLAST of CmUC04G067860 vs. NCBI nr
Match: XP_022966506.1 (uncharacterized protein LOC111466138 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-27
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           IAYI+D+LV+DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  IAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 TLSEA 132
           T SEA
Sbjct: 76  TRSEA 80

[Close]

BLAST of CmUC04G067860 vs. NCBI nr
Match: XP_038883759.1 (uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 uncharacterized protein LOC120074644 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           +AYISDHL+ADKKIFGGTTPSTVSN EWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  LAYISDHLIADKKIFGGTTPSTVSNREWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 TLSEA 132
             SEA
Sbjct: 76  ARSEA 80

[Close]

BLAST of CmUC04G067860 vs. NCBI nr
Match: KAG6603220.1 (40S ribosomal protein S28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.1 bits (331), Expect = 3.5e-27
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 37  SELHRLENRLFILYIYFHRLLQLEDGSKIHIAYISDHLVADKKIFGGTTPSTVSNSEWWE 96
           SE+HRLENR+ +  +    ++    G+    AYIS  LVADKKIFGGTTP+TV NSEWWE
Sbjct: 94  SEVHRLENRINLTKMAAKYIVVSTLGA-FAFAYISHILVADKKIFGGTTPTTVLNSEWWE 153

Query: 97  ETDKKFQAWPRTAGPPVVMNPISRQNFIVKTLSEA 132
           ETDKKFQAWPRTAGPPVVMNPISRQNFIVKT SEA
Sbjct: 154 ETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRSEA 187

[Close]

BLAST of CmUC04G067860 vs. NCBI nr
Match: XP_023517179.1 (uncharacterized protein LOC111781016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.0 bits (328), Expect = 7.7e-27
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           IAYI+D+LV+DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  IAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 TLSEA 132
           T  EA
Sbjct: 76  TRPEA 80

[Close]

BLAST of CmUC04G067860 vs. NCBI nr
Match: XP_022925267.1 (uncharacterized protein LOC111432556 [Cucurbita moschata] >KAG7027625.1 hypothetical protein SDJN02_11640 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.0 bits (328), Expect = 7.7e-27
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           IAYI+D+LV+DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  IAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 TLSEA 132
           T  EA
Sbjct: 76  TRPEA 80

[Close]

BLAST of CmUC04G067860 vs. ExPASy TrEMBL
Match: A0A6J1HPI7 (uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.8e-28
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           IAYI+D+LV+DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  IAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 TLSEA 132
           T SEA
Sbjct: 76  TRSEA 80

[Close]

BLAST of CmUC04G067860 vs. ExPASy TrEMBL
Match: A0A6J1EBA8 (uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC111432556 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.7e-27
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           IAYI+D+LV+DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  IAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 TLSEA 132
           T  EA
Sbjct: 76  TRPEA 80

[Close]

BLAST of CmUC04G067860 vs. ExPASy TrEMBL
Match: A0A6J1HS56 (uncharacterized protein LOC111467297 OS=Cucurbita maxima OX=3661 GN=LOC111467297 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 68  AYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKT 127
           AY+SD LVADKKIFGGTTPSTV NSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKT
Sbjct: 17  AYVSDILVADKKIFGGTTPSTVLNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKT 76

Query: 128 LSEA 132
            SEA
Sbjct: 77  RSEA 80

[Close]

BLAST of CmUC04G067860 vs. ExPASy TrEMBL
Match: A0A5A7UM13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00430 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           +AYI DHL++DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  VAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 T 128
           +
Sbjct: 76  S 76

[Close]

BLAST of CmUC04G067860 vs. ExPASy TrEMBL
Match: A0A1S3CSQ7 (uncharacterized protein LOC103504527 OS=Cucumis melo OX=3656 GN=LOC103504527 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           +AYI DHL++DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 16  VAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 75

Query: 127 T 128
           +
Sbjct: 76  S 76

[Close]

BLAST of CmUC04G067860 vs. TAIR 10
Match: AT1G01170.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-25
Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           I+YI D +++D KIFGGTTP TVSN EWW  TD+KFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 20  ISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPVVMNPISRQNFIVK 79

Query: 127 TLSE 131
           T  E
Sbjct: 80  TRPE 83

[Close]

BLAST of CmUC04G067860 vs. TAIR 10
Match: AT1G01170.2 (Protein of unknown function (DUF1138) )

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-25
Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           I+YI D +++D KIFGGTTP TVSN EWW  TD+KFQAWPRTAGPPVVMNPISRQNFIVK
Sbjct: 20  ISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPVVMNPISRQNFIVK 79

Query: 127 TLSE 131
           T  E
Sbjct: 80  TRPE 83

[Close]

BLAST of CmUC04G067860 vs. TAIR 10
Match: AT4G00860.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 97.4 bits (241), Expect = 8.8e-21
Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 67  IAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 126
           +AY+ D +++D K+FGGTTP T++N EW   T+++ QAWPR AGPPVVMNPISRQNFIVK
Sbjct: 17  VAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPPVVMNPISRQNFIVK 76

Query: 127 TLSE 131
           +  E
Sbjct: 77  SRPE 80

The following BLAST results are available for this feature:

BLAST of CmUC04G067860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966506.1	2.0e-27	93.85	uncharacterized protein LOC111466138 [Cucurbita maxima]	[more]
XP_038883759.1	2.7e-27	92.31	uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 unchara...	[more]
KAG6603220.1	3.5e-27	71.58	40S ribosomal protein S28, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023517179.1	7.7e-27	92.31	uncharacterized protein LOC111781016 [Cucurbita pepo subsp. pepo]	[more]
XP_022925267.1	7.7e-27	92.31	uncharacterized protein LOC111432556 [Cucurbita moschata] >KAG7027625.1 hypothet...	[more]

BLAST of CmUC04G067860 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC04G067860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPI7	9.8e-28	93.85	uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138...	[more]
A0A6J1EBA8	3.7e-27	92.31	uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC1114325...	[more]
A0A6J1HS56	1.4e-26	93.75	uncharacterized protein LOC111467297 OS=Cucurbita maxima OX=3661 GN=LOC111467297...	[more]
A0A5A7UM13	3.2e-26	91.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CSQ7	3.2e-26	91.80	uncharacterized protein LOC103504527 OS=Cucumis melo OX=3656 GN=LOC103504527 PE=...	[more]

BLAST of CmUC04G067860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01170.1	2.0e-25	78.13	Protein of unknown function (DUF1138)	[more]
AT1G01170.2	2.0e-25	78.13	Protein of unknown function (DUF1138)	[more]
AT4G00860.1	8.8e-21	62.50	Protein of unknown function (DUF1138)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009515	Protein of unknown function DUF1138	PFAM	PF06592	DUF1138	coord: 65..126 e-value: 1.8E-37 score: 127.2
IPR009515	Protein of unknown function DUF1138	PANTHER	PTHR34267	OS11G0161033 PROTEIN	coord: 65..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR34267:SF1	OS11G0161033 PROTEIN	coord: 65..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G067860.1	CmUC04G067860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane