CmUC03G067720 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G067720
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RNA helicase
Location	CmU531Chr03: 31783781 .. 31789542 (+)
RNA-Seq Expression	CmUC03G067720
Synteny	CmUC03G067720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACACTATATATATATTCAACACAGGAGTTGGGGGTAATGTGGTGAAGGCAAACGCAAAACCATATAGTCCATACATTCTATCCTTATCGCTGGGTGTGTGATATTTGATAAAGCCCCTATAAACCCACCTCCGAGTTCCTGATTCTTCTTCCATTGGGACTTTGAGCGAGTGCAAGCTGGCCAAGAAAAGCCTCGCAACTTAGTTACCCACTGAAGAGAAGCTGAAAACAAGAAATGGCTTCCCTTCTCGGAGTTACCGCAATTCATCATGCACCAAATCTTGATATGTACCGAAGGATGGGAACAACGGCGACCGCGTCACCTGCGCCATCTCTTTCTTTTGCTGATAAGTCCCACCTAATTGCTCTGAAAGCTCAAGCTTGTTTCAGTGGTACTAACCGTCGCAATTTGTCCGGATTCAGCTCTTCTGCAATTGCCACTCCCAATTCCATCCTCAGCGAAGAGGCTTTTAGTAGTCTCGATGGCTTTTCTAAAGACTCCTTGGATGATAATCTTATCGACTCTGAACCTGATTCATCTCTTGCATTCTCTGCTGCTGACGATGATGAGCTCGCCATTTCCAAATTACATTTGCCCCAACGACTCACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAGTACCATCCCACTCTCTGATTTTGCTCATTCCTGTGTCATTTTACAGTTAATGTGGTTATTCGATTTTTTTTTTTTTTCAATTACTTGGCAAATGCTATCTGCGAAAAGGTGGGACACAGTTTCGTTTGTTCATCAGACGCACTGCTTTAAGTTTAAAGTTACGATTTTCTCCGTTCTCTTCCAGTATTTTCGTTTGGTTTGTTGAAGCCATTACGTTAAATTCAATTATTATCTATTCGTTTAAGTATAAATTTCAATATGTTACAGATATGGGAAATATTAACATGTAAAATCCACTGTGCAGAAATTTTGATCATGTGTTTAAGAATTTTCCATGACTAAATGTAGTTTTCTTTTATGATATAGATTCATTTTATTCTTTAGTTAATCTTCCAGGTTATTTTAGTTACAGAAGGAGAAGTAATTTGCTTTGAACCTCACATATGTTTTGTTACAAGATATTTGTTGTTGACCAATTTGATTAGTCAAGTGGTGTGATTGTATCTCTAATTTTTTATTTTTTCATTTAAAAAATGCAGAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTAGCCTTTGGGATACCAATTCTTAAAAAACTCACCGAAGATGATGAATTAAGAAGTTCCCGGAGGTACGGTTTTGTGACTTCCTAAAACCTGGTACCTAGAGACTTGTCTCAGAATTACTTATGTTTCAGTATTTGTTACAGGCGGTCGCGTCTTCCTAGAGTTCTGGTGTTAACACCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAAGAATCTGCACCTTATTTGAACACTGTTTGTGTTTATGGAGGAGTTTCATATGTTACACAGCAGAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACATGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATTGATTTGGTAATCTTTTACATTTTTTAACATCATAATTAATTACTTGGTCTTCAGATTTTTGACAGTTGCATATTTTATTGTAATAAACCATGAAATTGTTGTGGAAGATGCTTTCCCTTTGGACTATGGTGTACTGAATAGATGAGACTCACTTTTCACATTTAATCTCCATATAAAGATCAATTCCTGTTAAGTAAAAGTAATCATCCTGTATCAAATGTGTAGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTTCATGCCATATTAACTACCGCAACTTCAAAGCAAACCATTCTCAGAGATCTTGTAACAGTAAGAATTGAAGCATATCCCCCTTTCTTCAAACACTACAGACCTGTAATCTTTGGACTTATTCTTTTGTATGCTGTAACTGCAAAGCTGTTATTTGATGTCTTGTTATGTGGTTGGTTTGATTGTTTGAACATATTAGATTATCACAACTTTTGGTAAAATATCAAGTTCTTTTATTGAAAAACTAGCTCTCTTTGAGAAACAAAGGAAAAATTAATTTCTTTTACCTATAAATTCTTAATATCCACCTCTAACATGATTTTTAGCTTAAAATCAATTAATTCCCTTCTCATGGTGTTGATACAGAACATTTATGCCTGATCATGTATGTTTGTGTGTGTATATTTTTCTAATTTTTAAAAACTTGTATCTCACTTCATTCTAACGAGACATTCATTTTTTCTTTTTCTTACCTCCGGACTATGTGCTGAGTTTAAGCCTTGTGCCCTTAAAACACTGGTATTGGCACCAAACATTCTTATTGTGATGAAGATTTGGGGGGGGGGGGGGGGATTTGGAAGCAAAGTTTTTGTGACTAATTATCTTCTTGAAATTTGATTTTAACCCTATTTCCAAACACAAATTGGACGGAATGATATAAAACTTTGCCCTTCAGAAATATCTTCTATGAGAGACTCTTTCATCCATAATAGCATCCTTTCATTTTCTTGTGAACCATATTGATTTCAATGACTGATCCCCACAATTAATTCCCTTCTCATGGTGTTGATACAGAACATTTATGCCTGATCATGATTTCAGGTTTATGCTAAGGGGGGCAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAATTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATTCCAAATGTTGATTTGGTAACTTTCATTTGGACTGTATTCTGATCAATGCCAATTTCTTTTGCTCTTGTTCTATGTGAAACTTATGCAATAACACCCCCAGCACCACCACCGCCACCAAAAAATAATAATAATAAAATAAAATGGTAATGGAAAATAAATTCAATATGTTGAGCATTTATTTTGTAATTATCCGAGGTTTCATTTGACCAAAAGTAGGGATAAGTTTTTTCAGTTTCTACTCTTTCTTCTATGAAGGGCGTTCATACTTCTATCTCTTGAATTAAAGCTGATTCTCATTAAAAAGGATAGTAATACAAAAAACAAAAACAAAAAGAATTTAGGCATTTTGAGGAACGTCATCAGGAATTTTTCCAGGTAACCATTTCTATTGTGGACTTTTTTTACGATGGTTATGAGCTTTTAGTTTCAATGCTTTTCTACTCTGTCCAAATTCTCAATCTGAGGCGTGCACTAATGATTTTGCCAATTTGAGAGTAGTTGAGCATTCTTCAAATGAGAGAGTCGAGCATTGGCTTGTGAAGTATCTTACTTTTAGAAGTTTCATTCTCATACTCATTTTTCTTTAGCTTGTTAAATTAGACCTTTTTCAAAATCTTCATTTCTGTAACAATTATCTAACTTGACTTCTGTCTACCTTCACTTCAGGTTATCCACTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGTACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCCATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGTGGAGTTCATCCTGAATCTATTGAGTTTTTCACTCCAACAGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGTTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGTATTAAGAGTTCTGTTTGTGAATTTATAGCTAGAAAAATTATCTTCCAAATAGTTATGTCATTGAAGGTAAAACATATTTGTTGCAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCTCGAGGGTTTCTGTCTGCTAGGTCTGTGACTGGATTTCTATCTGACATTTATTCCCCAGCTGCAGACGAAGTCGGAAAAATACATCTAATTGCAGATGAAAGGGTGAAAATATTTAGCATGCTCTACCTATTTCATGTCTTTCATTTTAAATTTCGTTGGCATACAATTTTGTTTTATAAACTTAAATATGGATGTTGGTAATGCCAGATAAATGGAGCAGTATTTGATCTTCCGGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTATTTTGAAGGTCACGAAGGTAAGTTTGTTCTTTCCTCCTCTCACCATCACAATTGTGGCTTAGTTAGTAATATCTTATGTTGCCTCAAAAATAGTTTTCTTATCTCTTTGATGCATGACCATTTACTAACAGAATGTTGGACCATGTTCCATACTTCATTTTGCAGTTACCTCCTCTACAAGACGATGGCCCACCAAGTGACAACTACGGAAGATTTTCTGGCAGAGAAAGAAATAGCCGAAATAGCTCTAGGGATCGCAGAGGTTATAGAACATCAAGGGGCTGGGGCAGCAGTCGAGACTCTGATGACGATGGTGATTTATTTGGTAGAAATCGCAGTTTTAGAACTAACAGCAGCAGGGGTCGGAACTTTAAAAGTTCAGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCGTCCGTTGATAGGTAATTTTTTGCTTAATGCTAGTGGGTATTGTGTATTTCGGTGCAACAGTGCTTTGGAAGTAAAACTATGCGTTTATAGCAAGACAGTGTAGGCCATTAGTCTTTAAAAATTCAGTACTTCCACAAGGAAAGAAGAATAATATTTTGGGATGGGTGTGTTGAATATGCAGTTGATTTCGTTTGCATTTCCTTTTTTAATCACTGCGCGTATTTAGGTTTCTGGTTCTTTGTCTTCTATTTCTTTCAAAATATCCCCTCAAGGAAGAATATATTGACATGCATATGCTCAATTGTAGATAACAGTGAGGTAATCTGAATATATATTGCAGATTTGGAGGCTCCTGTTTTAATTGCGGAAGGATGGGGCACAGAGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAATATACTTGATCAGCTTAGTTATTGTAGGTTTTTGGATTCAGTGGGTGGTATTTAGGTCTCGAGGATGCTGCTTGAAAGAGTTAAAGGAATGGCGCTCAGTCTCATGTTTAGCGTTACATGATTACTTTTAAAATGTTTGCAACATTCTCAGTCTGTTCTAATTTAAGTTTTGCGCAGTGAAACATTCAAAATCGATTCGTCATGTTGAGTTATATGGGTACCCCTTTTTCAAACCCCCCATGTAGAATGTATATGTTTCAGAAGAATGAAGAAATGAAAACAGCATAGCACATTCCGTTGGTTATAACTTGATTTACTTATTCGTGGGAACAGTGCA

mRNA sequence

CTTTACACTATATATATATTCAACACAGGAGTTGGGGGTAATGTGGTGAAGGCAAACGCAAAACCATATAGTCCATACATTCTATCCTTATCGCTGGGTGTGTGATATTTGATAAAGCCCCTATAAACCCACCTCCGAGTTCCTGATTCTTCTTCCATTGGGACTTTGAGCGAGTGCAAGCTGGCCAAGAAAAGCCTCGCAACTTAGTTACCCACTGAAGAGAAGCTGAAAACAAGAAATGGCTTCCCTTCTCGGAGTTACCGCAATTCATCATGCACCAAATCTTGATATGTACCGAAGGATGGGAACAACGGCGACCGCGTCACCTGCGCCATCTCTTTCTTTTGCTGATAAGTCCCACCTAATTGCTCTGAAAGCTCAAGCTTGTTTCAGTGGTACTAACCGTCGCAATTTGTCCGGATTCAGCTCTTCTGCAATTGCCACTCCCAATTCCATCCTCAGCGAAGAGGCTTTTAGTAGTCTCGATGGCTTTTCTAAAGACTCCTTGGATGATAATCTTATCGACTCTGAACCTGATTCATCTCTTGCATTCTCTGCTGCTGACGATGATGAGCTCGCCATTTCCAAATTACATTTGCCCCAACGACTCACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTAGCCTTTGGGATACCAATTCTTAAAAAACTCACCGAAGATGATGAATTAAGAAGTTCCCGGAGGCGGTCGCGTCTTCCTAGAGTTCTGGTGTTAACACCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAAGAATCTGCACCTTATTTGAACACTGTTTGTGTTTATGGAGGAGTTTCATATGTTACACAGCAGAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACATGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATTGATTTGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTTCATGCCATATTAACTACCGCAACTTCAAAGCAAACCATTCTCAGAGATCTTGTAACAGTAAGAATTGAAGCATATCCCCCTTTCTTCAAACACTACAGACCTGTTTATGCTAAGGGGGGCAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAATTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATTCCAAATGTTGATTTGGTTATCCACTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGTACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCCATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGTGGAGTTCATCCTGAATCTATTGAGTTTTTCACTCCAACAGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGTTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCTCGAGGGTTTCTGTCTGCTAGGTCTGTGACTGGATTTCTATCTGACATTTATTCCCCAGCTGCAGACGAAGTCGGAAAAATACATCTAATTGCAGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCGGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTATTTTGAAGGTCACGAAGTTACCTCCTCTACAAGACGATGGCCCACCAAGTGACAACTACGGAAGATTTTCTGGCAGAGAAAGAAATAGCCGAAATAGCTCTAGGGATCGCAGAGGTTATAGAACATCAAGGGGCTGGGGCAGCAGTCGAGACTCTGATGACGATGGTGATTTATTTGGTAGAAATCGCAGTTTTAGAACTAACAGCAGCAGGGGTCGGAACTTTAAAAGTTCAGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCGTCCGTTGATAGATTTGGAGGCTCCTGTTTTAATTGCGGAAGGATGGGGCACAGAGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAATATACTTGATCAGCTTAGTTATTGTAGGTTTTTGGATTCAGTGGGTGGTATTTAGGTCTCGAGGATGCTGCTTGAAAGAGTTAAAGGAATGGCGCTCAGTCTCATGTTTAGCGTTACATGATTACTTTTAAAATGTTTGCAACATTCTCAGTCTGTTCTAATTTAAGTTTTGCGCAGTGAAACATTCAAAATCGATTCGTCATGTTGAGTTATATGGGTACCCCTTTTTCAAACCCCCCATGTAGAATGTATATGTTTCAGAAGAATGAAGAAATGAAAACAGCATAGCACATTCCGTTGGTTATAACTTGATTTACTTATTCGTGGGAACAGTGCA

Coding sequence (CDS)

ATGGCTTCCCTTCTCGGAGTTACCGCAATTCATCATGCACCAAATCTTGATATGTACCGAAGGATGGGAACAACGGCGACCGCGTCACCTGCGCCATCTCTTTCTTTTGCTGATAAGTCCCACCTAATTGCTCTGAAAGCTCAAGCTTGTTTCAGTGGTACTAACCGTCGCAATTTGTCCGGATTCAGCTCTTCTGCAATTGCCACTCCCAATTCCATCCTCAGCGAAGAGGCTTTTAGTAGTCTCGATGGCTTTTCTAAAGACTCCTTGGATGATAATCTTATCGACTCTGAACCTGATTCATCTCTTGCATTCTCTGCTGCTGACGATGATGAGCTCGCCATTTCCAAATTACATTTGCCCCAACGACTCACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTAGCCTTTGGGATACCAATTCTTAAAAAACTCACCGAAGATGATGAATTAAGAAGTTCCCGGAGGCGGTCGCGTCTTCCTAGAGTTCTGGTGTTAACACCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAAGAATCTGCACCTTATTTGAACACTGTTTGTGTTTATGGAGGAGTTTCATATGTTACACAGCAGAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACATGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATTGATTTGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTTCATGCCATATTAACTACCGCAACTTCAAAGCAAACCATTCTCAGAGATCTTGTAACAGTAAGAATTGAAGCATATCCCCCTTTCTTCAAACACTACAGACCTGTTTATGCTAAGGGGGGCAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAATTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATTCCAAATGTTGATTTGGTTATCCACTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGTACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCCATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGTGGAGTTCATCCTGAATCTATTGAGTTTTTCACTCCAACAGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGTTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCTCGAGGGTTTCTGTCTGCTAGGTCTGTGACTGGATTTCTATCTGACATTTATTCCCCAGCTGCAGACGAAGTCGGAAAAATACATCTAATTGCAGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCGGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTATTTTGAAGGTCACGAAGTTACCTCCTCTACAAGACGATGGCCCACCAAGTGACAACTACGGAAGATTTTCTGGCAGAGAAAGAAATAGCCGAAATAGCTCTAGGGATCGCAGAGGTTATAGAACATCAAGGGGCTGGGGCAGCAGTCGAGACTCTGATGACGATGGTGATTTATTTGGTAGAAATCGCAGTTTTAGAACTAACAGCAGCAGGGGTCGGAACTTTAAAAGTTCAGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCGTCCGTTGATAGATTTGGAGGCTCCTGTTTTAATTGCGGAAGGATGGGGCACAGAGCATCAGAATGCCCTGACAAGTGA

Protein sequence

MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLSGFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRNFKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK

Homology

[Close]

BLAST of CmUC03G067720 vs. NCBI nr
Match: XP_038879136.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 1399.0 bits (3620), Expect = 0.0e+00
Identity = 732/768 (95.31%), Postives = 742/768 (96.61%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAIHHAPNLDMYRRMGTTATASP PSLSFA+KSHLIALKAQ CFSG++RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFAEKSHLIALKAQTCFSGSSRRNLS 60

Query: 61  GF-SSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSA---ADDDELAIS 120
           GF SSSAIATPNSILSEEAF SLDGFSKDSLD NL+DSE +SSLAFS    ADDDELAIS
Sbjct: 61  GFTSSSAIATPNSILSEEAFRSLDGFSKDSLDGNLVDSESNSSLAFSTAPPADDDELAIS 120

Query: 121 KLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180
           KL+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT
Sbjct: 121 KLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180

Query: 181 EDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           EDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALS
Sbjct: 181 EDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALS 240

Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ+
Sbjct: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQS 300

Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT
Sbjct: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360

Query: 361 VRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRER 420
                          VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRER
Sbjct: 361 ---------------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRER 420

Query: 421 TLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI 480
           TLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI
Sbjct: 421 TLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI 480

Query: 481 LMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTA 540
           LMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTA
Sbjct: 481 LMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTA 540

Query: 541 QKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVT 600
           +KLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVT
Sbjct: 541 RKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVT 600

Query: 601 GFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPL 660
           GFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPL
Sbjct: 601 GFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPL 660

Query: 661 QDDGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSS 720
           QDDGPPSDNYGRFSGRERNSRNSSRDRRG+RTSRGWGSSRDSDDDGDLF RNRSFRTNSS
Sbjct: 661 QDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDLFSRNRSFRTNSS 720

Query: 721 RGRNFKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
           RGRNFKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RGRNFKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 753

[Close]

BLAST of CmUC03G067720 vs. NCBI nr
Match: XP_008450498.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1394.4 bits (3608), Expect = 0.0e+00
Identity = 723/764 (94.63%), Postives = 738/764 (96.60%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASP PSLSF DKSHLIALK Q CFSG++RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHL 120
           GF+SSAIATPNSILSEEAF SLDGFSKD LDDNLID EP+SSLAFS ADDDELAISKL+L
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS-ADDDELAISKLNL 120

Query: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180
           PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE
Sbjct: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180

Query: 181 LRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240
            RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD
Sbjct: 181 SRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240

Query: 241 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300
           VVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS
Sbjct: 241 VVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300

Query: 301 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIE 360
           ATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT    
Sbjct: 301 ATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT---- 360

Query: 361 AYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
                      VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 -----------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRN 720
           PPSDNYGRFSGRERNSRNSSRDRRG+RTSRGWGSSRDSDDDGD+F RNRSFRTNSS+GRN
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRN 720

Query: 721 FKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
           F+SSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of CmUC03G067720 vs. NCBI nr
Match: XP_004135577.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001.1 hypothetical protein Csa_007094 [Cucumis sativus])

HSP 1 Score: 1370.1 bits (3545), Expect = 0.0e+00
Identity = 709/764 (92.80%), Postives = 733/764 (95.94%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAI HAPNLD+YRR GTTATASP PSLSF DKSHLIALK Q CFSG++RRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHL 120
           GF+SSAIATPNSILSEEAF S DGFS+DSLDDNLID EP+SSLAF AADDDELAISKL+L
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAF-AADDDELAISKLNL 120

Query: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180
           PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE
Sbjct: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180

Query: 181 LRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240
            RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSRGVD
Sbjct: 181 SRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVD 240

Query: 241 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300
           VVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS
Sbjct: 241 VVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300

Query: 301 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIE 360
           ATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT    
Sbjct: 301 ATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT---- 360

Query: 361 AYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
                      VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 -----------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPP +EEVL+SSAEQVVVTLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGLGALAAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           D+YSPAADE+GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILK+TKLPPLQDDG
Sbjct: 601 DVYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRN 720
           PPSDNYGRFSGRER+SRNSSRDRRG +TSRGWGSSRDSDD+GD+F RNRSFRTN+S+GRN
Sbjct: 661 PPSDNYGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRN 720

Query: 721 FKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
           F+SSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of CmUC03G067720 vs. NCBI nr
Match: KAA0050973.1 (DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 702/743 (94.48%), Postives = 717/743 (96.50%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASP PSLSF DKSHLIALK Q CFSG++RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHL 120
           GF+SSAIATPNSILSEEAF SLDGFSKD LDDNLID EP+SSLAFS ADDDELAISKL+L
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS-ADDDELAISKLNL 120

Query: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180
           PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE
Sbjct: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180

Query: 181 LRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240
            RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD
Sbjct: 181 SRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240

Query: 241 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300
           VVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS
Sbjct: 241 VVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300

Query: 301 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIE 360
           ATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT    
Sbjct: 301 ATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT---- 360

Query: 361 AYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
                      VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 -----------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRN 720
           PPSDNYGRFSGRERNSRNSSRDRRG+RTSRGWGSSRDSDDDGD+F RNRSFRTNSS+GRN
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRN 720

Query: 721 FKSSGDDWLIGGRRSSRSSSVDR 744
           F+SSGDDWLIGGRRSSRSSSVDR
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDR 727

[Close]

BLAST of CmUC03G067720 vs. NCBI nr
Match: XP_022157915.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 699/780 (89.62%), Postives = 723/780 (92.69%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SP PSLSFADKSH+ A KAQ  FS  +RRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSA- 120
                      SGFSSSAIATPNSILSEEAF SLDGFSK    D+ IDS+P+SSL FSA 
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 --ADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
             AD+DELAISKL LPQRLT++L+KRGIT LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYLENPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEAL 420
           SKQTILRDLVT               VYAKGGKTIVFTQTKRDADEVSLALANSITSEAL
Sbjct: 361 SKQTILRDLVT---------------VYAKGGKTIVFTQTKRDADEVSLALANSITSEAL 420

Query: 421 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 480
           HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR
Sbjct: 421 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 480

Query: 481 TGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVH 540
           TGRAGKEG+AILMFTNSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVV TLRGVH
Sbjct: 481 TGRAGKEGSAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVH 540

Query: 541 PESIEFFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSY 600
           PESIEFFTPTAQKLIDEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSY
Sbjct: 541 PESIEFFTPTAQKLIDEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSY 600

Query: 601 SRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGN 660
           SRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERI+GAVFDLPEEIAKELLNK LPEGN
Sbjct: 601 SRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGN 660

Query: 661 TILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLF 720
           TILKVTKLPPLQDDGPPSDNYGRFSGRERNSRN+SRDRRG+RTSRGWGS RDSDDDGDLF
Sbjct: 661 TILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGDLF 720

Query: 721 GRNRSFRT-NSSRGRNFKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
            RNRSFRT NSSR RNFKSSGDDWLIGGRRSSRSSS+D FGGSCFNCGRMGHRASECPDK
Sbjct: 721 SRNRSFRTNNSSRSRNFKSSGDDWLIGGRRSSRSSSMDGFGGSCFNCGRMGHRASECPDK 761

[Close]

BLAST of CmUC03G067720 vs. ExPASy Swiss-Prot
Match: Q8L7S8 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2)

HSP 1 Score: 955.7 bits (2469), Expect = 3.2e-277
Identity = 536/774 (69.25%), Postives = 610/774 (78.81%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MAS +GV +++  P+L++ +    +   S   SLS  DK     L   +    T R + S
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLSL-DKPFFTPL---SLVRRTRRIHSS 60

Query: 61  G-FSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLH 120
                SA+ATPNS+LSEEAF SL     D  D   +D + ++     A D +ELAISKL 
Sbjct: 61  SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNN---VEADDGEELAISKLS 120

Query: 121 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED- 180
           LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 DELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
            +  + RR  RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVR 360
           FSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T  
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT-- 360

Query: 361 IEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTL 420
                        VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTL
Sbjct: 361 -------------VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTL 420

Query: 421 NGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILM 480
           N FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM
Sbjct: 421 NAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILM 480

Query: 481 FTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQK 540
            T+SQ+RTVRSLERDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF+ TAQK
Sbjct: 481 HTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQK 540

Query: 541 LIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGF 600
           L +E+G  ALAAALA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGF
Sbjct: 541 LYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGF 600

Query: 601 LSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQD 660
           LSD+Y  AADEVGKI LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQD
Sbjct: 601 LSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQD 660

Query: 661 DGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDG--DLFGRNRSFRTNSS 720
           DGP SDNYGRFS R+R  R      RG R  RG GSSR  D  G  D  G  RS    SS
Sbjct: 661 DGPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSS 720

Query: 721 ---RGRNFKSSGDDWLIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 765
               G + + S DDWLIGGR SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 721 WSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 745

[Close]

BLAST of CmUC03G067720 vs. ExPASy Swiss-Prot
Match: Q0DM51 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2)

HSP 1 Score: 929.1 bits (2400), Expect = 3.2e-269
Identity = 513/762 (67.32%), Postives = 588/762 (77.17%), Query Frame = 0


Query: 28  ASPAPSLSFADKSHLIALKAQACFSGTNRRNLSG---FSSSAIATPNSILSEEAFSSLDG 87
           ++P+ S + A      +L+ +A F     R   G    ++ AIA+PNS+LSE AF  L  
Sbjct: 13  SNPSASAAAAGAGAAPSLRLRAAFRCWALRRAGGGRWAAAGAIASPNSVLSEHAFKRLQL 72

Query: 88  FSKDSLDDNLI---DSEPDSSLAFSAADDDELAISKLHLPQRLTDALQKRGITHLFPIQR 147
             ++  ++      D E   ++     D+DELAI++L LP++L   L+KRGITHLFPIQR
Sbjct: 73  SDEEEEEEEGAYGSDEEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQR 132

Query: 148 AVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDELRSSRRRSRLPRVLVLTPTRE 207
           AVL+PAL+GRDLIARAKTGTGKTLAFGIP++K+L E+D+ RS  RR R+PRVLVL PTRE
Sbjct: 133 AVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSV-RRGRIPRVLVLAPTRE 192

Query: 208 LAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLG 267
           LAKQVEKEIKESAP L+TVCVYGGVSY  QQNALSRGVDVVVGTPGRIIDLING SL LG
Sbjct: 193 LAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLG 252

Query: 268 EVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTI 327
           EV+YLVLDEADQMLAVGFEEDVE IL++LP++RQ+MLFSATMP WVKKL+R+YL NPLTI
Sbjct: 253 EVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTI 312

Query: 328 DLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKTIV 387
           DLVGDQDEKLAEGIKL+AI  T+TSK+T+L DL+T               VYAKGGKTIV
Sbjct: 313 DLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLIT---------------VYAKGGKTIV 372

Query: 388 FTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDI 447
           FT+TKRDADEVSLAL NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDI
Sbjct: 373 FTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDI 432

Query: 448 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFA 507
           PNVDL+IHYELPNDPETFVHRSGRTGRAGK GTAILMFTNSQRRTVRSLERDVGC+F+F 
Sbjct: 433 PNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFI 492

Query: 508 NPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGPGALAAALAQLSGFSHP 567
           +PPAIE+VLESSAE V+ TLRGVH ESI++F P A++L +E GP ALA+ALA LSGFS P
Sbjct: 493 SPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGFSQP 552

Query: 568 PSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERI 627
           PSSRSLI+HEQGWVTLQLTRDP Y RGF S RSVTGFLSD+ S AADEVGKI L ADE++
Sbjct: 553 PSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKV 612

Query: 628 NGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRN--- 687
            GAVFDLPEEIA++LL+ ELP GNTI KVTKLP LQDDGP +D+YGRFS  +R  RN   
Sbjct: 613 QGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGPATDSYGRFSNSDRGFRNRRS 672

Query: 688 ---SSRDRRG----------YRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRNFK-SS 747
               SR  RG           R  R + S  DS  D D  G  RS R++S  GR     S
Sbjct: 673 RGGGSRGGRGGWDSDGEDRFRRGGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGS 732

Query: 748 GDDWLIGGRRSSRSS--SVDRFGGSCFNCGRMGHRASECPDK 765
                 GGR SS  S  S   F G+CFNCG  GHRAS+CP+K
Sbjct: 733 RSSSSFGGRSSSFGSRDSSRSFSGACFNCGESGHRASDCPNK 758

[Close]

BLAST of CmUC03G067720 vs. ExPASy Swiss-Prot
Match: A0A1D6LAB7 (DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3B PE=2 SV=1)

HSP 1 Score: 911.0 bits (2353), Expect = 9.1e-264
Identity = 507/764 (66.36%), Postives = 578/764 (75.65%), Query Frame = 0


Query: 30  PAPSLSFADKSHLIALKAQACFSGTNRRNLSGFSSSAIATPNSILSEEAFSSLDGFSKDS 89
           PA +L+ ++    + L+A A F     R     ++ A+A+PNS+LSE AF  L   S D 
Sbjct: 7   PALALALSNPG-AVRLRA-AAFRCWALRRRGWAAAGALASPNSVLSEHAFKRLQLGSDDE 66

Query: 90  LDDNLIDSEPDSSLAFSAADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALE 149
             +    S+ D        D++ELAI++L LP  L   L+KRGITHLFPIQRAVL+PALE
Sbjct: 67  DGEGPYGSDADEGFEAGEGDNEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALE 126

Query: 150 GRDLIARAKTGTGKTLAFGIPILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKE 209
           GRDLIARAKTGTGKTLAFGIP++K+L E D+ R + RR R PRVLVL PTRELAKQVEKE
Sbjct: 127 GRDLIARAKTGTGKTLAFGIPMIKQLIEQDDGRIT-RRGRTPRVLVLAPTRELAKQVEKE 186

Query: 210 IKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLD 269
           IKESAP L TVCVYGGVSY  QQNALSRGVDVVVGTPGRIIDLING SL LGEV+YLVLD
Sbjct: 187 IKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLD 246

Query: 270 EADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDE 329
           EADQMLAVGFEEDVE IL++LP+ RQ+MLFSATMP+WVKKL+R+YL NPLTIDLVGDQDE
Sbjct: 247 EADQMLAVGFEEDVETILQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDE 306

Query: 330 KLAEGIKLHAILTTATSKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDA 389
           KLAEGIKL+AI  T TSK+T+L DL+T               VYAKGGKTIVFT+TK+DA
Sbjct: 307 KLAEGIKLYAIPLTTTSKRTVLSDLIT---------------VYAKGGKTIVFTRTKKDA 366

Query: 390 DEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 449
           DEVSLAL NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IH
Sbjct: 367 DEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIH 426

Query: 450 YELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEV 509
           YELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV+SLERDVGC FEF +PP+IEEV
Sbjct: 427 YELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFISPPSIEEV 486

Query: 510 LESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLIN 569
           LESSAE V+ TLRGVHPES ++F   A+KL +E GP ALA+ALA LSGFS PPSSRSLI+
Sbjct: 487 LESSAEHVIATLRGVHPESTKYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLIS 546

Query: 570 HEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLP 629
           HEQGWVTLQLTR+  + RGF S RSVTGFLSD+ S AADEVGKI+L ADE + GAVFDLP
Sbjct: 547 HEQGWVTLQLTREQGFGRGFFSPRSVTGFLSDVCSAAADEVGKIYLTADENVQGAVFDLP 606

Query: 630 EEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGYRTS 689
           EEIAK+LL  ELP GNT+ K++KLP LQDDGP +D+YGRFS  +R SRN+ R R G   S
Sbjct: 607 EEIAKDLLTMELPPGNTLTKISKLPALQDDGPATDSYGRFS-NDRGSRNNRRSRGG-GAS 666

Query: 690 RGWGSSRDSDDDG-DLFGRNRSFRTNSSRGRNFKSSGDDWLIGGRRSSRSSSVD------ 749
           RG G     D DG D F R       S R  N   S DDW  GGR+S+RSSS        
Sbjct: 667 RGRGG---WDTDGEDRFRRG----GRSLRSDNDSWSDDDWSGGGRKSNRSSSFGSRSSSY 726

Query: 750 ----------------------RFGGSCFNCGRMGHRASECPDK 765
                                  F G+CFNCG  GHRA++CP+K
Sbjct: 727 SSRGSPSFGGRSSSFGGRESNRSFSGACFNCGESGHRATDCPNK 743

[Close]

BLAST of CmUC03G067720 vs. ExPASy Swiss-Prot
Match: A0A1D6GDY8 (DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3A PE=3 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 2.0e-263
Identity = 509/768 (66.28%), Postives = 578/768 (75.26%), Query Frame = 0


Query: 32  PSLSF---ADKSHLIALKAQACFSGTNRRNLSGFSSSAIATPNSILSEEAFSSLDGFSKD 91
           P+++F   A  S  + L+A A F     R      ++A+A+PNS+LSE AF  L   S D
Sbjct: 8   PAIAFSNPATASGAVRLRA-AAFRCWALRRRGWAVAAAVASPNSVLSEHAFKRLQLGSDD 67

Query: 92  SLDDNLIDSEPDSSLAFSAADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPAL 151
             ++    S+ D        D++ELAI++L LP  L   L+KRGITHLFPIQRAVL+PAL
Sbjct: 68  EDEEGPYGSDADEGF---QGDEEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPAL 127

Query: 152 EGRDLIARAKTGTGKTLAFGIPILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEK 211
            GRDLIARAKTGTGKTLAFGIP++K+L E D+ RS+ RR R PRVLVL PTRELAKQVEK
Sbjct: 128 GGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRST-RRGRTPRVLVLAPTRELAKQVEK 187

Query: 212 EIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVL 271
           EIKESAP L TVCVYGGVSY  QQNALSRGVDVVVGTPGRIIDLING SL LGEV+YLVL
Sbjct: 188 EIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVL 247

Query: 272 DEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQD 331
           DEADQMLAVGFEEDVE IL++LP+ RQ+MLFSATMP+WVKKL+R+YL NPLTIDLVGDQD
Sbjct: 248 DEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQD 307

Query: 332 EKLAEGIKLHAILTTATSKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRD 391
           EKLAEGIKLHAI  TATSK+TIL DL+T               VYAKGGKTIVFT+TK+D
Sbjct: 308 EKLAEGIKLHAIPLTATSKRTILSDLIT---------------VYAKGGKTIVFTRTKKD 367

Query: 392 ADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVI 451
           ADEVSLAL  SI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+I
Sbjct: 368 ADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLII 427

Query: 452 HYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEE 511
           HYELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV SLERDVGCKFEF +PP+IEE
Sbjct: 428 HYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFEFISPPSIEE 487

Query: 512 VLESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLI 571
           VLESSAE V+ TLRGVHPES ++F   A+KL +E GP ALA+ALA LSGFS PPSSRSLI
Sbjct: 488 VLESSAEHVIATLRGVHPESTQYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLI 547

Query: 572 NHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDL 631
           ++EQGWVTLQLTR+P Y RGF S RSVTGFLSD+ S AADEVGKI++ ADE + GAVFDL
Sbjct: 548 SYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADENVQGAVFDL 607

Query: 632 PEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGYRT 691
           PEEIAK+LL  E+P GNT+ K++KLP LQDD P +D+YGRFS  +R SRN  R  RG   
Sbjct: 608 PEEIAKDLLTMEVPPGNTLTKISKLPALQDDSPATDSYGRFS-NDRGSRN--RRSRGGGA 667

Query: 692 SRGWGS-SRDSDDDGDLFGRNRSFRTNSSRGRNFKSSGDDWLIGGRRSSRSS-------- 751
           SRG G    DS+D     GR       S R  N   S DDW  GGR+S+RSS        
Sbjct: 668 SRGRGGWDTDSEDRYRRGGR-------SLRSDNDSWSDDDWSGGGRKSNRSSSSFGGRSS 727

Query: 752 -----------------------SVDRFGGSCFNCGRMGHRASECPDK 765
                                  S   F G+CFNCG  GHRAS+CP+K
Sbjct: 728 SYGSRGSPSPSFGVRSSSLGGRESSRSFSGACFNCGESGHRASDCPNK 745

[Close]

BLAST of CmUC03G067720 vs. ExPASy Swiss-Prot
Match: Q9LUW5 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.5e-128
Identity = 238/407 (58.48%), Postives = 298/407 (73.22%), Query Frame = 0


Query: 111 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 170
           D LAIS+L +   +  AL  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161

Query: 171 ILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 230
           I+ K+    +  +   R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG     
Sbjct: 162 IIDKII---KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221

Query: 231 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 290
           Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281

Query: 291 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 350
           P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI  ++I+  +  + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341

Query: 351 LRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDIS 410
           +  LVT                +AKGGK IVFTQTKRDAD +S ALA S   EALHGDIS
Sbjct: 342 IGPLVT---------------EHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDIS 401

Query: 411 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 470
           Q QRERTL GFR G F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAG
Sbjct: 402 QSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAG 461

Query: 471 KEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQV 518
           K+G+AIL+++  Q R V+ +ER+VG +F      A+E    S  E +
Sbjct: 462 KKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]

BLAST of CmUC03G067720 vs. ExPASy TrEMBL
Match: A0A1S3BQ06 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1)

HSP 1 Score: 1394.4 bits (3608), Expect = 0.0e+00
Identity = 723/764 (94.63%), Postives = 738/764 (96.60%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASP PSLSF DKSHLIALK Q CFSG++RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHL 120
           GF+SSAIATPNSILSEEAF SLDGFSKD LDDNLID EP+SSLAFS ADDDELAISKL+L
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS-ADDDELAISKLNL 120

Query: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180
           PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE
Sbjct: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180

Query: 181 LRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240
            RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD
Sbjct: 181 SRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240

Query: 241 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300
           VVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS
Sbjct: 241 VVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300

Query: 301 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIE 360
           ATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT    
Sbjct: 301 ATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT---- 360

Query: 361 AYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
                      VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 -----------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRN 720
           PPSDNYGRFSGRERNSRNSSRDRRG+RTSRGWGSSRDSDDDGD+F RNRSFRTNSS+GRN
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRN 720

Query: 721 FKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
           F+SSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of CmUC03G067720 vs. ExPASy TrEMBL
Match: A0A0A0M1E9 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1)

HSP 1 Score: 1370.1 bits (3545), Expect = 0.0e+00
Identity = 709/764 (92.80%), Postives = 733/764 (95.94%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAI HAPNLD+YRR GTTATASP PSLSF DKSHLIALK Q CFSG++RRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHL 120
           GF+SSAIATPNSILSEEAF S DGFS+DSLDDNLID EP+SSLAF AADDDELAISKL+L
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAF-AADDDELAISKLNL 120

Query: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180
           PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE
Sbjct: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180

Query: 181 LRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240
            RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSRGVD
Sbjct: 181 SRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVD 240

Query: 241 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300
           VVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS
Sbjct: 241 VVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300

Query: 301 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIE 360
           ATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT    
Sbjct: 301 ATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT---- 360

Query: 361 AYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
                      VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 -----------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPP +EEVL+SSAEQVVVTLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGLGALAAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           D+YSPAADE+GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILK+TKLPPLQDDG
Sbjct: 601 DVYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRN 720
           PPSDNYGRFSGRER+SRNSSRDRRG +TSRGWGSSRDSDD+GD+F RNRSFRTN+S+GRN
Sbjct: 661 PPSDNYGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRN 720

Query: 721 FKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
           F+SSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of CmUC03G067720 vs. ExPASy TrEMBL
Match: A0A5D3CJA2 (RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 PE=3 SV=1)

HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 702/743 (94.48%), Postives = 717/743 (96.50%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASP PSLSF DKSHLIALK Q CFSG++RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHL 120
           GF+SSAIATPNSILSEEAF SLDGFSKD LDDNLID EP+SSLAFS ADDDELAISKL+L
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS-ADDDELAISKLNL 120

Query: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180
           PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE
Sbjct: 121 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 180

Query: 181 LRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240
            RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD
Sbjct: 181 SRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 240

Query: 241 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300
           VVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS
Sbjct: 241 VVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 300

Query: 301 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIE 360
           ATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT    
Sbjct: 301 ATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT---- 360

Query: 361 AYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
                      VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 -----------VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLFGRNRSFRTNSSRGRN 720
           PPSDNYGRFSGRERNSRNSSRDRRG+RTSRGWGSSRDSDDDGD+F RNRSFRTNSS+GRN
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRN 720

Query: 721 FKSSGDDWLIGGRRSSRSSSVDR 744
           F+SSGDDWLIGGRRSSRSSSVDR
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDR 727

[Close]

BLAST of CmUC03G067720 vs. ExPASy TrEMBL
Match: A0A6J1DUC8 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1)

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 699/780 (89.62%), Postives = 723/780 (92.69%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SP PSLSFADKSH+ A KAQ  FS  +RRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSA- 120
                      SGFSSSAIATPNSILSEEAF SLDGFSK    D+ IDS+P+SSL FSA 
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 --ADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
             AD+DELAISKL LPQRLT++L+KRGIT LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYLENPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEAL 420
           SKQTILRDLVT               VYAKGGKTIVFTQTKRDADEVSLALANSITSEAL
Sbjct: 361 SKQTILRDLVT---------------VYAKGGKTIVFTQTKRDADEVSLALANSITSEAL 420

Query: 421 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 480
           HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR
Sbjct: 421 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 480

Query: 481 TGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVH 540
           TGRAGKEG+AILMFTNSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVV TLRGVH
Sbjct: 481 TGRAGKEGSAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVH 540

Query: 541 PESIEFFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSY 600
           PESIEFFTPTAQKLIDEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSY
Sbjct: 541 PESIEFFTPTAQKLIDEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSY 600

Query: 601 SRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGN 660
           SRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERI+GAVFDLPEEIAKELLNK LPEGN
Sbjct: 601 SRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGN 660

Query: 661 TILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDGDLF 720
           TILKVTKLPPLQDDGPPSDNYGRFSGRERNSRN+SRDRRG+RTSRGWGS RDSDDDGDLF
Sbjct: 661 TILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGDLF 720

Query: 721 GRNRSFRT-NSSRGRNFKSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
            RNRSFRT NSSR RNFKSSGDDWLIGGRRSSRSSS+D FGGSCFNCGRMGHRASECPDK
Sbjct: 721 SRNRSFRTNNSSRSRNFKSSGDDWLIGGRRSSRSSSMDGFGGSCFNCGRMGHRASECPDK 761

[Close]

BLAST of CmUC03G067720 vs. ExPASy TrEMBL
Match: A0A6J1I2F6 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111468402 PE=3 SV=1)

HSP 1 Score: 1314.7 bits (3401), Expect = 0.0e+00
Identity = 697/772 (90.28%), Postives = 725/772 (93.91%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGT--TATASPAPSLSFADKSHLIALKAQACF---SGTN 60
           MAS+LGVTAIHHAPNLDMYRRMGT  TAT S +PSLSFADKSH  +LK+       S ++
Sbjct: 1   MASILGVTAIHHAPNLDMYRRMGTPATATVSSSPSLSFADKSHFNSLKSLTSLSSSSSSS 60

Query: 61  RRNLSGFSSSAIATPNSILSEEAFSSLDGFSKDSLDDN-LIDSEPDSSLAFSAADDDELA 120
           RRNLSGFSSSAIATPNSILSEEAF SLDGFSKDSLDDN LIDSE +SSLAFS  DDDELA
Sbjct: 61  RRNLSGFSSSAIATPNSILSEEAFRSLDGFSKDSLDDNGLIDSEANSSLAFS--DDDELA 120

Query: 121 ISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKK 180
           ISKL LPQRL+DAL+KRGIT LF IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+KK
Sbjct: 121 ISKLGLPQRLSDALEKRGITQLFAIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKK 180

Query: 181 LTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNA 240
           +TEDDEL+S RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQ+A
Sbjct: 181 ITEDDELKSPRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSA 240

Query: 241 LSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR 300
           LSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR
Sbjct: 241 LSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR 300

Query: 301 QNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDL 360
           QNMLFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKL+AILTTATSKQTILRDL
Sbjct: 301 QNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAILTTATSKQTILRDL 360

Query: 361 VTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQR 420
           VT               VYAKGGKTIVFT+TKRDADEVSLALAN+ITSEALHGDISQHQR
Sbjct: 361 VT---------------VYAKGGKTIVFTRTKRDADEVSLALANTITSEALHGDISQHQR 420

Query: 421 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 480
           ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT
Sbjct: 421 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 480

Query: 481 AILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTP 540
           AILMFTNSQRRTVRSLERDVGCKFEFANPP IE+VLESSAEQVV+TLRGVHPESIEFFTP
Sbjct: 481 AILMFTNSQRRTVRSLERDVGCKFEFANPPGIEKVLESSAEQVVITLRGVHPESIEFFTP 540

Query: 541 TAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARS 600
           TAQKLIDEQG GALAAALAQLSGFS PPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARS
Sbjct: 541 TAQKLIDEQGAGALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARS 600

Query: 601 VTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLP 660
           VTGFLSD+YSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNK+LPEGNT+LK+TKLP
Sbjct: 601 VTGFLSDVYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKDLPEGNTLLKITKLP 660

Query: 661 PLQDDGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGW-GSSRDSDDDGDLFGRNRSFRT 720
           PLQDDGPPSD+YGRFSGRER+SRNSSRDRRG RTSRGW GSSRDSDDDGDLF RNR FR+
Sbjct: 661 PLQDDGPPSDSYGRFSGRERSSRNSSRDRRGSRTSRGWGGSSRDSDDDGDLFSRNRGFRS 720

Query: 721 NSSRGRNFKSSGDDWLIGG--RRSSRSSSVDRFGGSCFNCGRMGHRASECPD 764
           NSSRGRNFKSSGDDWLIGG  RRSSRSSS+DRFGGSCFNCGRMGHRASECP+
Sbjct: 721 NSSRGRNFKSSGDDWLIGGGSRRSSRSSSMDRFGGSCFNCGRMGHRASECPN 755

[Close]

BLAST of CmUC03G067720 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 956.4 bits (2471), Expect = 1.3e-278
Identity = 536/773 (69.34%), Postives = 611/773 (79.04%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MAS +GV +++  P+L++ +    +   S   SLS  DK     L   +    T R + S
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLSL-DKPFFTPL---SLVRRTRRIHSS 60

Query: 61  G-FSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLH 120
                SA+ATPNS+LSEEAF SL     D  D   +D + ++     A D +ELAISKL 
Sbjct: 61  SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNN---VEADDGEELAISKLS 120

Query: 121 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED- 180
           LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 DELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
            +  + RR  RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVR 360
           FSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T  
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT-- 360

Query: 361 IEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTL 420
                        VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTL
Sbjct: 361 -------------VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTL 420

Query: 421 NGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILM 480
           N FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM
Sbjct: 421 NAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILM 480

Query: 481 FTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQK 540
            T+SQ+RTVRSLERDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF+ TAQK
Sbjct: 481 HTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQK 540

Query: 541 LIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGF 600
           L +E+G  ALAAALA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGF
Sbjct: 541 LYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGF 600

Query: 601 LSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQD 660
           LSD+Y  AADEVGKI LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQD
Sbjct: 601 LSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQD 660

Query: 661 DGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDG--DLFGRNRSFRTNSS 720
           DGP SDNYGRFS R+R  R      RG R  RG GSSR  D  G  D  G  RS    SS
Sbjct: 661 DGPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSS 720

Query: 721 ---RGRNFKSSGDDWLIGGR--RSSRSSSVDRFGGSCFNCGRMGHRASECPDK 765
               G + + S DDWLIGGR   SSR+ S + FGGSCF CG+ GHRA++CPDK
Sbjct: 721 WSRGGSSSRGSSDDWLIGGRSSSSSRAPSRESFGGSCFICGKSGHRATDCPDK 744

[Close]

BLAST of CmUC03G067720 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 955.7 bits (2469), Expect = 2.3e-278
Identity = 536/774 (69.25%), Postives = 610/774 (78.81%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPAPSLSFADKSHLIALKAQACFSGTNRRNLS 60
           MAS +GV +++  P+L++ +    +   S   SLS  DK     L   +    T R + S
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLSL-DKPFFTPL---SLVRRTRRIHSS 60

Query: 61  G-FSSSAIATPNSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLH 120
                SA+ATPNS+LSEEAF SL     D  D   +D + ++     A D +ELAISKL 
Sbjct: 61  SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNN---VEADDGEELAISKLS 120

Query: 121 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED- 180
           LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 DELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
            +  + RR  RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVR 360
           FSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T  
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT-- 360

Query: 361 IEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTL 420
                        VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTL
Sbjct: 361 -------------VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTL 420

Query: 421 NGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILM 480
           N FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM
Sbjct: 421 NAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILM 480

Query: 481 FTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQK 540
            T+SQ+RTVRSLERDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF+ TAQK
Sbjct: 481 HTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQK 540

Query: 541 LIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGF 600
           L +E+G  ALAAALA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGF
Sbjct: 541 LYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGF 600

Query: 601 LSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQD 660
           LSD+Y  AADEVGKI LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQD
Sbjct: 601 LSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQD 660

Query: 661 DGPPSDNYGRFSGRERNSRNSSRDRRGYRTSRGWGSSRDSDDDG--DLFGRNRSFRTNSS 720
           DGP SDNYGRFS R+R  R      RG R  RG GSSR  D  G  D  G  RS    SS
Sbjct: 661 DGPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSS 720

Query: 721 ---RGRNFKSSGDDWLIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 765
               G + + S DDWLIGGR SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 721 WSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 745

[Close]

BLAST of CmUC03G067720 vs. TAIR 10
Match: AT5G26742.3 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 885.6 bits (2287), Expect = 2.9e-257
Identity = 475/633 (75.04%), Postives = 528/633 (83.41%), Query Frame = 0


Query: 141 RAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED-DELRSSRRRSRLPRVLVLTPT 200
           RAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+  +  + RR  RLP+ LVL PT
Sbjct: 37  RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96

Query: 201 RELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLN 260
           RELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RGVDVVVGTPGRIIDLI G SL 
Sbjct: 97  RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156

Query: 261 LGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPL 320
           LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+MLFSATMPTWVKKLARKYL+NPL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216

Query: 321 TIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIEAYPPFFKHYRPVYAKGGKT 380
            IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T               VYAKGGKT
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT---------------VYAKGGKT 276

Query: 381 IVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 440
           IVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGL
Sbjct: 277 IVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGL 336

Query: 441 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFE 500
           DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERDVGC FE
Sbjct: 337 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFE 396

Query: 501 FANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGPGALAAALAQLSGFS 560
           F +PP + ++LESSA+QVV TL GVHP+SI+FF+ TAQKL +E+G  ALAAALA LSGFS
Sbjct: 397 FISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFS 456

Query: 561 HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADE 620
            PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADEVGKI LIAD+
Sbjct: 457 QPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADD 516

Query: 621 RINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNS 680
           RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQDDGP SDNYGRFS R+R  R  
Sbjct: 517 RIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRMPRGG 576

Query: 681 SRDRRGYRTSRGWGSSRDSDDDG--DLFGRNRSFRTNSS---RGRNFKSSGDDWLIGGRR 740
               RG R  RG GSSR  D  G  D  G  RS    SS    G + + S DDWLIGGR 
Sbjct: 577 G-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRS 636

Query: 741 SSRSSSVDR---FGGSCFNCGRMGHRASECPDK 765
           SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 637 SSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 652

[Close]

BLAST of CmUC03G067720 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 461.1 bits (1185), Expect = 1.8e-129
Identity = 238/407 (58.48%), Postives = 298/407 (73.22%), Query Frame = 0


Query: 111 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 170
           D LAIS+L +   +  AL  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161

Query: 171 ILKKLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 230
           I+ K+    +  +   R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG     
Sbjct: 162 IIDKII---KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221

Query: 231 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 290
           Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281

Query: 291 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 350
           P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI  ++I+  +  + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341

Query: 351 LRDLVTVRIEAYPPFFKHYRPVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDIS 410
           +  LVT                +AKGGK IVFTQTKRDAD +S ALA S   EALHGDIS
Sbjct: 342 IGPLVT---------------EHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDIS 401

Query: 411 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 470
           Q QRERTL GFR G F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAG
Sbjct: 402 QSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAG 461

Query: 471 KEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQV 518
           K+G+AIL+++  Q R V+ +ER+VG +F      A+E    S  E +
Sbjct: 462 KKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]

BLAST of CmUC03G067720 vs. TAIR 10
Match: AT3G22310.1 (putative mitochondrial RNA helicase 1 )

HSP 1 Score: 451.4 bits (1160), Expect = 1.4e-126
Identity = 243/447 (54.36%), Postives = 313/447 (70.02%), Query Frame = 0


Query: 71  NSILSEEAFSSLDGFSKDSLDDNLIDSEPDSSLAFSAADDDELAISKLHLPQRLTDALQK 130
           +SI+S   F++ +       D  + DSE       S+   D LAI+ L +   +  AL+ 
Sbjct: 78  SSIVSSAGFAAQEYAPSYENDGGIGDSES----VGSSGGGDGLAIADLGISPEIVKALKG 137

Query: 131 RGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDELRSSRRRSRL 190
           RGI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPI+ K+    +  +   R + 
Sbjct: 138 RGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII---KFNAKHGRGKN 197

Query: 191 PRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRII 250
           P+ LVL PTRELA+QVEKE +ESAP L+T+C+YGG     Q   L+ G+DV VGTPGRII
Sbjct: 198 PQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRII 257

Query: 251 DLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKL 310
           DL+   +LNL EV+++VLDEADQML VGF EDVE+IL+KLP++RQ+M+FSATMP+W++ L
Sbjct: 258 DLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSL 317

Query: 311 ARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVRIEAYPPFFKHYR 370
            +KYL NPLTIDLVGD D+KLA+GI +++I   +  + +I+  LV               
Sbjct: 318 TKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLV--------------- 377

Query: 371 PVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLV 430
             + KGGK IVFTQTKRDAD ++  LA S   EALHGDISQ QRERTL GFR G F++LV
Sbjct: 378 KEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILV 437

Query: 431 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSL 490
           ATDVA+RGLD+PNVDLVIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+    Q R V+ +
Sbjct: 438 ATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMI 497

Query: 491 ERDVGCKFEFANPPAIEEVLESSAEQV 518
           E++VG +F      A+E    S  E V
Sbjct: 498 EKEVGSRFNELPSIAVERGSASMFEGV 502

The following BLAST results are available for this feature:

BLAST of CmUC03G067720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879136.1	0.0e+00	95.31	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida]	[more]
XP_008450498.1	0.0e+00	94.63	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo]	[more]
XP_004135577.1	0.0e+00	92.80	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001...	[more]
KAA0050973.1	0.0e+00	94.48	DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEA...	[more]
XP_022157915.1	0.0e+00	89.62	DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Momordica chara...	[more]

BLAST of CmUC03G067720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7S8	3.2e-277	69.25	DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
Q0DM51	3.2e-269	67.32	DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo...	[more]
A0A1D6LAB7	9.1e-264	66.36	DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3...	[more]
A0A1D6GDY8	2.0e-263	66.28	DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3...	[more]
Q9LUW5	2.5e-128	58.48	DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX...	[more]

BLAST of CmUC03G067720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQ06	0.0e+00	94.63	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1	[more]
A0A0A0M1E9	0.0e+00	92.80	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1	[more]
A0A5D3CJA2	0.0e+00	94.48	RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 P...	[more]
A0A6J1DUC8	0.0e+00	89.62	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1	[more]
A0A6J1I2F6	0.0e+00	90.28	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111468402 PE=3 SV=1	[more]

BLAST of CmUC03G067720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26742.1	1.3e-278	69.34	DEAD box RNA helicase (RH3)	[more]
AT5G26742.2	2.3e-278	69.25	DEAD box RNA helicase (RH3)	[more]
AT5G26742.3	2.9e-257	75.04	DEAD box RNA helicase (RH3)	[more]
AT3G22330.1	1.8e-129	58.48	putative mitochondrial RNA helicase 2	[more]
AT3G22310.1	1.4e-126	54.36	putative mitochondrial RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 132..338 e-value: 6.6E-60 score: 215.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 144..321 score: 31.99313
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 390..470 e-value: 6.5E-32 score: 122.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 374..470 e-value: 1.3E-30 score: 106.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 364..525 score: 22.967388
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 747..763 e-value: 2.4E-4 score: 30.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 747..762 e-value: 3.0E-6 score: 27.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 748..763 score: 10.674652
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 114..325 e-value: 9.6E-76 score: 255.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 365..540 e-value: 5.8E-51 score: 175.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 191..491
None	No IPR available	GENE3D	4.10.60.10		coord: 733..764 e-value: 6.1E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 649..741
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 670..707
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 708..722
None	No IPR available	PANTHER	PTHR47959:SF12	SUBFAMILY NOT NAMED	coord: 27..759
None	No IPR available	PANTHER	PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	coord: 27..759
None	No IPR available	CDD	cd12938	GUCT_Hera	coord: 564..644 e-value: 3.0339E-21 score: 86.1979
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 375..479 e-value: 6.56094E-53 score: 177.314
None	No IPR available	CDD	cd00268	DEADc	coord: 124..322 e-value: 1.78823E-95 score: 293.194
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 137..310 e-value: 1.8E-47 score: 161.4
IPR012562	GUCT	PFAM	PF08152	GUCT	coord: 557..657 e-value: 2.8E-17 score: 62.8
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 733..763

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G067720.1	CmUC03G067720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding