CmUC03G065170 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G065170
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	THO complex subunit 6
Location	CmU531Chr03: 29080932 .. 29089293 (+)
RNA-Seq Expression	CmUC03G065170
Synteny	CmUC03G065170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATATCTCTCTACCAACTGCATTCATCGGCTTCACGATTCAGCAGTTGCTTCACTAAATTTCTCCGGCGAGCCGTCGAAGGCCGTCATCTGATTATCCGACGCCATTTTCTGGCAGTCACGCCGCCGCAACTGAGTTGACATCTTCGCCATTATCGTTTTAAGCAGATTCTGAGAGACTGGAAATTGAGCTGTGGCAAGCGATTATCAAATGTTGGCCGACGCGACGAATTGGGATGAAGCTGCCTACAGAGAGAGTATATATAAAGAGAGAGAGATCCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTTGCCCTGAGACCATCGTGGCTGCATCCAGTGATGGCTCCATTGCCTCTTACTCGATCGCATCTTGCATCTCTAAGCTGGTAATCTTCTTGATTTTCGATATCGATAGTCATTTTGTTGTTTGATTTGCTTATGAAATCAGTACTTGAAGGGCGTGGAATGGTTAAACTTAAGGATGCTCTTCGAGGGCTTCTTTGGTTAGACTAGTCAAGAGCCAAGTACCTTGTTTACAACCAAAGGTCTTTGTTAACCTTAACGATCCATTTTGGACTCATTGGCGTGAATCCTCAGAACTTCACTCTTGCCAAAGTTTATATTCAAACTGCAAGCAAACTCCAATATCTTTATGAGATAAAAAAGATAACCTAGAAATTCATGTCAAAAATAGAAAATAATAACGTATCATCAGCAAATTGTTTGTGATTCAGTCAAGTAGATGGAATTCCAACTGGATAAGACACATGTGCGTCTTATGTATAGTTTTAGACTAGGTATATTGTGCGTCTTATGAACTCTTATCCTGATTATACCTATTTTTCATGCCTGTTTCAGCATTTTGGTTATGGAAATACTAAAAGGCAAGTCCATTTTATCTTTGCTCTCGACTTATTTCTAAATTTCAGGCTGCAAACTTGTACTAATGGCTCACTATGTACCTTACTTTAGTTTGCTAGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCACGATGGGCCAACATATGATGTCAAATTTTATGATGATGGCGACAATACTCTACTACTGAGGTTCCTCTCTCTCCCAATACTAAAATAGTTCGATAACTTTCTTTTTACTCTTTCATTTCTTGGTAATTTCATTCTAGTTCCGTATTGGCTATTGTAGTCGTATTTGTCATCCCATCCCGACTATCTCAACACTTATTCTAAAGTTAATTTTAATATGTATGTATGAATGTATACTTATTGATTAGGTGAAATTGTAGTTAGGTGCACAATCAGTTGCATGTTACTTTCTAGAAATTTCAACCAGTTGAAGCTTAATTCAGTGCAGACTAAATGGTGGTATTGTGCTGTACTGTTTAACTTAGTTTTAGTTTCAAAATCAAGAACAAGCCAAGTAGTTCTTTTATTGTGAACCATCATGGCTATTTCTTTGGATGGTGAGATGAATACATAAATATAGTTGTTGTATATTCATTATATTAACTCCCATAGGCTGAACACATTATTTTCTTACATTAATTGACATGTACTTGTTTTTACCATGCTCGTTTGCTTCCAAATTTTGGGATCTTGTTTTGTCTACTTTTAGTTGGTCTTTCATTTGTCCAAACTCTATCTCTCTACTTTGGTTTCCTTATTGGTGGGTCATCCTTTTGGTGGTACTAAGAAGACGGTTTGTTTGGCTCTTGTGTGTGCTTTTTTCTTGAGATTGTGGGGCGAACGAAACAATTGGCTTTTTAATGACTCTTTTTCCCCTTTTTTCAATCGTTTTATGGAATTGGTTTTGTTTACTACTTTTTCTTGGTGCAAAATTAAGCACCCTTTTAGTCATTTCGGCATATCTTTTCTAGTAAGCAATTGGCGTTCTCTGATGTAATCATCTTTTGGTATTTGGGGTTCACCCCTGCTTTCATCTATCAATGAAATTGTTTCTTTTTCTAAAAAGTAAAAAAATGATTGACATGTACTTGTTTGAGCTTCAACAACTGCCTAAATGCTTTTGATTATTTATTGAATTTATAGTCATTGAAGAATAAAGATATGCCTACAGCCTGTAAAATTGAGTTAAATGGCAAGATTGAATGGGTGAAAACGTGGGCATTGTTCTTGATTGAAATATCTGATTACTTGTGCACAACATTTTAGCTGTGGGGATGATGGTCACATTCGAGGATGGAGGTGGAAAGAATGTACAAATATAGAGGTGCCCATTTATGTGCAAGGTAATAGTCTATAGATGTGTTATCTGCAGCAGTAGCATAGTTTTCATGAACCCCAGCAGGGGCAGCCTCTTTATTTGTTTTAGTTTTCTTTGACCGTCGAAAAATTTCATTTTCACTGTTCTCATTCTTTTAAGGTTTTGATTAGGTGTATCATTTCAATTTTCAGCTCTCATAATTACTTCATTCCGTTATTTTTATTCCAGGTAGTCATATTGAGCCTATAATGGACCTGATGAATCCTCAATACAAGTAGGCTATTAACAAATATTTTGTATCTTTTACTTATATTTCCTTGGCATTCTTATTCAGCCTGTAATTGACCTGGTGGATTCTGAAAATAATCAGGTTATTCTACCATGGCCAATTTATTAGATTTAGGTTTATATTCTCTTTTGGTATATGTATTTTCAGTTTTTATCCATGTTTGTCCTTGTACTTTTGTTAAGTGGTCACTTTTTTCAAGTAAAAGACCATAATGGATGTTTTGAAAATACATAGACTAAAATGAACACGAATTGAATGTTTAGAAACTAAATGAACATTTTGAAAGCAGAGAGACAAAAATGTCCAAAAGCTAAAAGTACAATTTCCTAACTGATATATAATTCTAAAATTTAATATCTTGTGATTAATATTATACAAAAAGGAAGGCCACTGCTTTGCCTTGGTTTTATGTGTTGTACTACTTTCTTTTAATATATAAGAAACAGACCCCAATACTTGAATTATCAATCTGGACCTTTCCATGTGGAACATTAATCAACTTTCAAATATTGTCTTTTTGACATCATAATTACACATTTATGTTATCGTCTATCCTCTATTAATACAGCAGTCAGCAGCTGCTCTTGGAAAATGGCCAATGTATAATGCAAGGATGCTTTTATTATTTTCCTTAGATAGATTTATCTGACATAACTTTATATTTGTTTTAATTTCAGATTTATAAAGTTAAGCTGAAAATGAAATAGATATTGATTTGTTACCTTTAACGCATGTCATCTCTTTGATTTCCTCTTACATTTTTATGTACCTTATTGCTGTCTTCTAGAGGTCCTTGGGGCGCTCTTTCTCCGATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGTTAATAAATCTGTTATTTCCTCCTCTTATTCTATAGTAGCTAGAAAGCATGACATATTCGTTGCATATTATTTTTTTAAGTTGCAAATAATTAATGTACTTGTAATAATTATTATTATATTGATGTACTCCTAATAATTTAATTAAAGTACTAATCAAGTATGTTAAGACATGTTATTTAAATAATAAAAATTAGCAAAGACTAAAGAAAAAAACTTAATGACATCTAAACTTCTATTTAGGAGTACCCATTTTTTTAAAATGATTTTTTAATAACCAATTATTAAAGTTGAGAGTAAAATAGGTGTATATTAAAAATGAATGATAAAATAGATATGTAAAGATTCTCCACTGATAACTCTTTTTACATACAATAAAATTTAGATTAGGATAACTTCTTATCAGAAAAAGAAAAGAAAGAAGAGAAGAAGAAGAACAGATGAGGTGATATCTTATTTTATTTTACAGAGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCATATTGTTGGGATTTGGTACGTGTATTTTAAGGTGGATGTTGTAATTAACCATAAATTTTCCATTCATATTTTTTTTACAGCCAAGAATTAACTTCCTCCTAATGCTTGCTTATGGCTTCTTGTATTAAAATTTCAGGAGAGCGGTAAAATTAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGTTGCCCGAAACACCGTCAATCAAGTTCGTCTTTCCTTCTTTTGCTTGGTTGTATAATAGATTCTGATTTTCATTTTTACATTGACCCTCTTTGTATTTTGTATAGACTAGCATAGTTTGTTCTTTCGTCTTAATTGTGGTCGATTAACTAGTAATGAATTGGAAAAATACTTCTCTTCTTTATCCTTAACTTTATCCCCACCCAACACCGTCCTTCACAACCCCCCAAGTCTAAGTAATCTGAAGTCACTAAATGTTTGCTGGAAGATTTGTCCTCTAACTAACTTCCCCACATAACATCTCCCCGTTCATCTCATTTATTGCCTCTAGGCTTGATTTCCTGTTCATATAAGTTAATGAATCAGGGGTCTATTGCTGTGTCTGCTACTTTTCTCTTTGAATAATAGTTTGGTATGTAAGTAGTAGAGTATGCCATTTTCCTATACATCAACGGAAAGCATGAAATTCTTGAGATCTATTTCAAAAAGAATTTCTTCATACTTCATGCTTCATCGTTCAGTTAAATGCTACTTCTGAAAGTAAAGATACTAACTTTATTGTTATTGTTGGTCCACTCCTTTCAGTTTTATGTTTCAAAACATGTGATAATCGCTGGATTCTGAACTGTACTTTTCATGTATTTCCACCTTATTGCTTTCACACCTTGAATTCCAGATCATAACTGGTTCGGAAGATGGTACAGCACGAATATGGGGTAGGGAAATTATTTATTTATTTATAATATTAATATATATGTATAGATCTTAAGGAGAAGGCCTAACCATTTTCTTCCTACACTTGTATTATGTGTATTGAAAAATTCCCTTTTTTACAACCATAAATTTGTTGTGCTAGAATATAATTTTAGCGTAGCGGTTAGAACTTCTCAAAAAGAACATGGGTCTGAATTATCTTTGATTATCTGTCATCAATCAATTTGTAATCTCTACTTTTTTACCTGGTAAATTTAGGTTGGGGGGGTTTTTTTTGGCATAAATATGTAAATTATAAGAGCAAAAATTTGTATCTTATACAAGCCTTAGAAAAAATTGTATCTTATACGTGTTTATACTATCAAACCATACCAGATTGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCAGCTAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTGTTAGATGCATTGCTCTTGATGCCAGTGAAAGCTGGTTGGTAAGTATTTACTCAATGATCAGGAAAGTCTCCCATTTTTCTGTGTATTATCTACTGTTAATAATTTGGGTTAGCCTACAGATTTGGATATGGGTTTTTTGGACAGGTATTGTGTAATTTTGTTGTTTCTTGTTTGGCCTGTTTTCTATTCTTCATCATTCTTTTTGGATCTTTTTCCCTTCCTGAAGGAAAATATTTTGATAATGGCTTTATGTGACTCCATCATTCCCTGGCTTCTTGGTGGATATCCCTTCATACTAAATTATTTTGCAATTACAGTCTTTCGATGATTATTAATGATTGGAAGTCTCTCTTTAATCTCTAGAGGGGTTCCCTCTACCCCGGCCCTTAGGTTGTATCTTTCATTTTGTGGAATATACTCCTTTGATGTTTCTTATCATTATATAAATATATACATACTTTGTTGTTTGGATCCACCACTGGATTCTGAAAATTCTACTTATTCAGGTTCCCTTTAAAAGAAACATCCTAGTTATACAGACCGATATCCCATCAAACAAGACCATCTATCTGCTTGGCGCTTTGGTCTCATTTGCCATGTCGATCCTCACTAGAGCTGACTTCTTTATGCTACTCTTAAAACCAGATAACATCTCGAGCAAATTCAGCACCGACAACGAGTTGTAATGCTTTTTCTCTTTAGCAACGCCATATCAGCAAATTGCAAGTGGCTTATAATTATTTTACCCTTTCTCCAGCTATCTGCTAACCTCATCAGTTGCAAATAACAAATAGGAAAGGAAGAATAATTGACCTGATCTTAGCTTCTAGTTTTTTAACCTCCCGTTGCTTTTCCATTCAAGAAAAAGAAAAAAAATTGTATTTGAAATATAGCCAAAAAAACACTCCACCCACTTTTTTCGAATGGCATTTTTCTTCTAGATGGCTTGAAGTAGATTTCAACTCGCAAGCCACATGCCTTTTGTAAATCAATCTTCAACTGCCATGGCTTAGAAATTCTCCATTCATCAACACTTCCAAGCTCATTTTCTTAGACTGCAATAATACTTTACGCAAGGACTTTGGATATGATGTACACACTAGTTACCACCAAGCTGGGTCAAAACTCCCTCTTTACAAGACTTCAACCTTTTGGCAATCAAACAAATGAAGTTTTTGAGAAAAAAGAGCTTGGTTCACGTTCACCTTGAGGGATGTCACTTGTAATAATGTTCCAACATTTTTTATTTCAGTTCTATGCAAAATAAACGATGAAGTTGTAGATGTGACTAACTTTTTGCTGAGAACATAGCTCTTGTTGCATTGACTGGTACACTGGAGTGATATTCATGTGCTGTTTTTTATTCTAGGCCTGTGCTGATGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCAAAGACTTTGACCCGTTCTTCAATGCAGGATATGGTTTTTTGTGATAATCAAGTGAGTGATTCTCCTCGAACTGATTATACTTCCAAATTTTAATTGATTGACACTAGCCTGCAATTTGGTATTGTTCAGAAATCTGTCATCACGTTTTCATCTTTCATTAGATGATTAGACAAGAAATATGTATAGATTTCCAAATTTCTTGTCCATGATTTAATGCAACAGAAAAGTCATTCTTCTTGCGTAATTATTGTTAGACTTGCAAGTTCAGAAGCACACATATTATGGCCATGATACGAAATGAGCCTAGTAAGAAGTTATCTAGAAAACTAGCGCATGAGTAAATCAAATACTGTCATCTTTAATATCTCGTGCTATACCAGATTTTTCTGTCACCATTATATGCTCATTGTTGTTTCTCCATGCCCAGATATTAGGTGTTGGAGCAGAGCCATTCCTAACCCGATTCGACATAAATGGATCAGTGCTTTCGCAAATACAATGTGCCCCTCAGTCAGCTTTTTCCGTCGCATTGCATCCATCTGGAGTAAGTTTAACTTAATTCCTTTTGTCCTACGGTTTCTTTCAGTCTTCTCTTTGGAAGTTTTTCATTTCTCTCAATTTGGCGTGACATTATGGGAAGATTACAAGTTAACAATTTTCTTGGAACCAATTATTGGACCCTGAAGACTACTCCAACGGAGCAATTGGTGTTGCCACTTCCTCTTTGTATGCAGACCTCGGTGTTCAATTTAGTGTTTAGGTGTTACCTCATCACGGAATAACGAATTCAACATGTCATAATCGGTTAAGGTTTTGAGTTTAGTGGTGATTTAACTTGGTATCAAAAGTTTTATATTCTCCAATTAATATTGGTTTCTACTTATTGTTTCTTCTCCAAAATTTTCAAACCCACACATAAGTGAGAGGGTTGAAGTATTGATTTGATCAAATTTACTATAACCTATCGGCTTAAGATTTAAGATTTAACAAATACTTCATCCTTATATTGTACTTAGTGAATCATGCCATAATGGATGGTTCAGTTATGTCTTACTCATATCTTCCTTTGGCTTTCATCCAATCTTTAAATAGAACACCCGAGGGGATAACCTGAATTCAATGAACTTGCCTAGGCTATCCTACAACTACTCTCATCATAAAACGGTATTGTGATTCTCTCATTGTTGGATGGTTTATTTGTTTATTCAGGTCGCAGCAGTTGGAGGCTATGGCGGTCTCGTGGATGTTATCTCGCAGTTCGGAAGCCATTTATGCACATTCTGCTGTCAATACAGATAAAAAGAGATATAATGGGATGTGGCTGGAAATTGGAAGGTGCTGCATTTTGCTTCACGATTTACCTGTCAAGGAGATGCAATCCAAAAACCTTTTTCTTGTGGTGGAAGATGAAAGAAAGCAAATATTAAGCAGTAAGGTAGAGATTTAGAGAGATAAAAGTGAAAAAATGTACCAAAATTATGATCGAAGATGATGGAATTCCAGGTGGATACATGCTTCTTACTTTCAAATCACTAGCACTTAGCTATGATTCTAGAATTATCACCAACACCATCTTCCTATTCTCTCTCTATTTGCCCTTCTTTTGTTTTGTTCTCTCTGCAACTCAATTCGAACATCCCCAACCTCTTTTTGTTCAGGGCTCCTCCTTATCCAATTTATTTTCTATTTTTATTTTTTTCATTAAA

mRNA sequence

TTTGATATCTCTCTACCAACTGCATTCATCGGCTTCACGATTCAGCAGTTGCTTCACTAAATTTCTCCGGCGAGCCGTCGAAGGCCGTCATCTGATTATCCGACGCCATTTTCTGGCAGTCACGCCGCCGCAACTGAGTTGACATCTTCGCCATTATCGTTTTAAGCAGATTCTGAGAGACTGGAAATTGAGCTGTGGCAAGCGATTATCAAATGTTGGCCGACGCGACGAATTGGGATGAAGCTGCCTACAGAGAGAGTATATATAAAGAGAGAGAGATCCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTTGCCCTGAGACCATCGTGGCTGCATCCAGTGATGGCTCCATTGCCTCTTACTCGATCGCATCTTGCATCTCTAAGCTGTACTTGAAGGGCGTGGAATGGTTAAACTTAAGGATGCTCTTCGAGGGCTTCTTTGGCTGCAAACTTGTACTAATGGCTCACTATGTACCTTACTTTAGTTTGCTAGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCACGATGGGCCAACATATGATGTCAAATTTTATGATGATGGCGACAATACTCTACTACTGAGCTGTGGGGATGATGGTCACATTCGAGGATGGAGGTGGAAAGAATGTACAAATATAGAGGTGCCCATTTATGTGCAAGGTAGTCATATTGAGCCTATAATGGACCTGATGAATCCTCAATACAAAGGTCCTTGGGGCGCTCTTTCTCCGATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGAGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCATATTGTTGGGATTTGGAGAGCGGTAAAATTAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGTTGCCCGAAACACCGTCAATCAAATCATAACTGGTTCGGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCAGCTAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTGTTAGATGCATTGCTCTTGATGCCAGTGAAAGCTGGTTGGCCTGTGCTGATGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCAAAGACTTTGACCCGTTCTTCAATGCAGGATATGGTTTTTTGTGATAATCAAATATTAGGTGTTGGAGCAGAGCCATTCCTAACCCGATTCGACATAAATGGATCAGTGCTTTCGCAAATACAATGTGCCCCTCAGTCAGCTTTTTCCGTCGCATTGCATCCATCTGGAGTCGCAGCAGTTGGAGGCTATGGCGGTCTCGTGGATGTTATCTCGCAGTTCGGAAGCCATTTATGCACATTCTGCTGTCAATACAGATAAAAAGAGATATAATGGGATGTGGCTGGAAATTGGAAGGTGCTGCATTTTGCTTCACGATTTACCTGTCAAGGAGATGCAATCCAAAAACCTTTTTCTTGTGGTGGAAGATGAAAGAAAGCAAATATTAAGCAGTAAGGTAGAGATTTAGAGAGATAAAAGTGAAAAAATGTACCAAAATTATGATCGAAGATGATGGAATTCCAGGTGGATACATGCTTCTTACTTTCAAATCACTAGCACTTAGCTATGATTCTAGAATTATCACCAACACCATCTTCCTATTCTCTCTCTATTTGCCCTTCTTTTGTTTTGTTCTCTCTGCAACTCAATTCGAACATCCCCAACCTCTTTTTGTTCAGGGCTCCTCCTTATCCAATTTATTTTCTATTTTTATTTTTTTCATTAAA

Coding sequence (CDS)

ATGTTGGCCGACGCGACGAATTGGGATGAAGCTGCCTACAGAGAGAGTATATATAAAGAGAGAGAGATCCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTTGCCCTGAGACCATCGTGGCTGCATCCAGTGATGGCTCCATTGCCTCTTACTCGATCGCATCTTGCATCTCTAAGCTGTACTTGAAGGGCGTGGAATGGTTAAACTTAAGGATGCTCTTCGAGGGCTTCTTTGGCTGCAAACTTGTACTAATGGCTCACTATGTACCTTACTTTAGTTTGCTAGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCACGATGGGCCAACATATGATGTCAAATTTTATGATGATGGCGACAATACTCTACTACTGAGCTGTGGGGATGATGGTCACATTCGAGGATGGAGGTGGAAAGAATGTACAAATATAGAGGTGCCCATTTATGTGCAAGGTAGTCATATTGAGCCTATAATGGACCTGATGAATCCTCAATACAAAGGTCCTTGGGGCGCTCTTTCTCCGATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGAGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCATATTGTTGGGATTTGGAGAGCGGTAAAATTAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGTTGCCCGAAACACCGTCAATCAAATCATAACTGGTTCGGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCAGCTAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTGTTAGATGCATTGCTCTTGATGCCAGTGAAAGCTGGTTGGCCTGTGCTGATGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCAAAGACTTTGACCCGTTCTTCAATGCAGGATATGGTTTTTTGTGATAATCAAATATTAGGTGTTGGAGCAGAGCCATTCCTAACCCGATTCGACATAAATGGATCAGTGCTTTCGCAAATACAATGTGCCCCTCAGTCAGCTTTTTCCGTCGCATTGCATCCATCTGGAGTCGCAGCAGTTGGAGGCTATGGCGGTCTCGTGGATGTTATCTCGCAGTTCGGAAGCCATTTATGCACATTCTGCTGTCAATACAGATAA

Protein sequence

MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIASCISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR

Homology

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BLAST of CmUC03G065170 vs. NCBI nr
Match: XP_038880261.1 (THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex subunit 6 isoform X4 [Benincasa hispida])

HSP 1 Score: 733.4 bits (1892), Expect = 1.0e-207
Identity = 354/393 (90.08%), Postives = 364/393 (92.62%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL+                FG        Y    SLLAAEPHCFLQGHDGP YDVKF
Sbjct: 61  CISKLH----------------FG--------YGNTRSLLAAEPHCFLQGHDGPAYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD+G+NTLLLSCGDDGHIRGWRW+ECT+IEVPIY+QGSHIEP+MDLMNPQYKGPWGALSP
Sbjct: 121 YDNGNNTLLLSCGDDGHIRGWRWRECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           +PENNAIA+DAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 MPENNAIASDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSC+RCIALDASESWLACADGRSLSVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSLSVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR
Sbjct: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of CmUC03G065170 vs. NCBI nr
Match: XP_008450878.1 (PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subunit 6 [Cucumis melo var. makuwa] >TYK10060.1 THO complex subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 731.1 bits (1886), Expect = 5.1e-207
Identity = 351/393 (89.31%), Postives = 363/393 (92.37%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL               G+   K           SLLAAEPHCFLQGHDGPTYDVKF
Sbjct: 61  CISKLQF-------------GYGNTK-----------SLLAAEPHCFLQGHDGPTYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD+GDNTLLLSCGDDGHIRGWRW++CT+IEVPIY+QGSHIEP+MDLMNPQ+KGPWGALSP
Sbjct: 121 YDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS VRCIALDASESWLACADGRSLSVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSLSVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSS+QDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGL+DVISQFGSHLCTFCCQYR
Sbjct: 361 HPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of CmUC03G065170 vs. NCBI nr
Match: KAG7021946.1 (THO complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 726.5 bits (1874), Expect = 1.2e-205
Identity = 345/400 (86.25%), Postives = 374/400 (93.50%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           ML DATNWDE AYRES+YKERE+QTRTVFRTAWAPSL+GCPE+IV ASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLY------LKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGP 120
           CISKL+       + V ++ + + F+  +GCKLVL+ + VPY SLLAAEPHCFLQGHDGP
Sbjct: 61  CISKLHSGYGNTKRQVHFILVSIYFK-IWGCKLVLIVYVVPYSSLLAAEPHCFLQGHDGP 120

Query: 121 TYDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGP 180
           TYDVKF+D GDNTLLLSCGDDGHIRGWRW ECT+IEVPIY+QGSHIEP+MDLMNPQYKGP
Sbjct: 121 TYDVKFFDAGDNTLLLSCGDDGHIRGWRWNECTDIEVPIYLQGSHIEPVMDLMNPQYKGP 180

Query: 181 WGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNT 240
           WGALSPIPENNAIAT+AQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNT
Sbjct: 181 WGALSPIPENNAIATNAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNT 240

Query: 241 VNQIITGSEDGTARIWDCKSGKCIQLIDPAKD-KKLKGHFSCVRCIALDASESWLACADG 300
           VNQIITGSEDGTARIWDCK+GKCIQ+IDPAKD KK KG+FSCVRCIALDASESWLACADG
Sbjct: 241 VNQIITGSEDGTARIWDCKAGKCIQVIDPAKDNKKQKGNFSCVRCIALDASESWLACADG 300

Query: 301 RSLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQ 360
           RS SVWNLP+S+FIS+TLTRSSMQDMVFCDNQILGVGAEP LTRFDI+GS+LS+IQCAPQ
Sbjct: 301 RSFSVWNLPASDFISRTLTRSSMQDMVFCDNQILGVGAEPLLTRFDIHGSILSEIQCAPQ 360

Query: 361 SAFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           SAFSVA+HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR
Sbjct: 361 SAFSVAVHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 399

[Close]

BLAST of CmUC03G065170 vs. NCBI nr
Match: KAG6588052.1 (THO complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 723.4 bits (1866), Expect = 1.1e-204
Identity = 344/399 (86.22%), Postives = 369/399 (92.48%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           ML DATNWDE AYRES+YKERE+QTRTVFRTAWAPSL+GCPE+IV ASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLY-----LKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPT 120
           CISKL+      K      L  ++   +GCKLVL+ + VPY SLLAAEPHCFLQGHDGPT
Sbjct: 61  CISKLHSGYGNTKRQVHFILVSIYLKIWGCKLVLIVYVVPYSSLLAAEPHCFLQGHDGPT 120

Query: 121 YDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPW 180
           YDVKF+D GDNTLLLSCGDDGHIRGWRW ECT+IEVPIY+QGSHIEP+MDLMNPQYKGPW
Sbjct: 121 YDVKFFDAGDNTLLLSCGDDGHIRGWRWNECTDIEVPIYLQGSHIEPVMDLMNPQYKGPW 180

Query: 181 GALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTV 240
           GALSPIPENNAIAT+AQSGSIFSAAGDSCAYCWDLES KIKMVFKGHSDYLHCIVARNTV
Sbjct: 181 GALSPIPENNAIATNAQSGSIFSAAGDSCAYCWDLESSKIKMVFKGHSDYLHCIVARNTV 240

Query: 241 NQIITGSEDGTARIWDCKSGKCIQLIDPAKD-KKLKGHFSCVRCIALDASESWLACADGR 300
           NQIITGSEDGTARIWDCK+GKCIQ+IDPAKD KK KG+FSCVRCIALDASESWLACADGR
Sbjct: 241 NQIITGSEDGTARIWDCKAGKCIQVIDPAKDNKKQKGNFSCVRCIALDASESWLACADGR 300

Query: 301 SLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQS 360
           S SVWNLP+S+FIS+TLTRSSMQDMVFCDNQILGVGAEP LTRFDI+GS+LS+IQCAPQS
Sbjct: 301 SFSVWNLPASDFISRTLTRSSMQDMVFCDNQILGVGAEPLLTRFDIHGSILSEIQCAPQS 360

Query: 361 AFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           AFSVA+HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR
Sbjct: 361 AFSVAVHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 399

[Close]

BLAST of CmUC03G065170 vs. NCBI nr
Match: XP_004144008.1 (THO complex subunit 6 [Cucumis sativus] >KGN66260.1 hypothetical protein Csa_007648 [Cucumis sativus])

HSP 1 Score: 719.9 bits (1857), Expect = 1.2e-203
Identity = 346/393 (88.04%), Postives = 361/393 (91.86%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           ML DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL               G+   K           SLLAAEP+CFLQGHDGPTYDVKF
Sbjct: 61  CISKLQF-------------GYGNTK-----------SLLAAEPNCFLQGHDGPTYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD+GDNTLLLSCGDDGHIRGWRW++CT+I+VPI +QGSHIEP+MDL+NPQ+KGPWGALSP
Sbjct: 121 YDNGDNTLLLSCGDDGHIRGWRWRDCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS VRCIALDASESWLACADGRS+SVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSISVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSS+QDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR
Sbjct: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of CmUC03G065170 vs. ExPASy Swiss-Prot
Match: Q8L4M1 (THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.9e-128
Identity = 217/389 (55.78%), Postives = 288/389 (74.04%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSIASYSIA 60
           M  DATNW+E  YRESI KEREI+TRTVFRTAWAP      P+  V ASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVK 120
           S +S+                  FG        Y     ++ AEP   ++ H+GP YDVK
Sbjct: 61  SLVSQ---------------SASFG--------YSKGQDVMVAEPERVVRAHEGPAYDVK 120

Query: 121 FYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALS 180
           FY + ++ LLLSCGDDG +RGW+W+E    +V ++++ +H++P+++L+NPQ+KGPWGALS
Sbjct: 121 FYGEDEDALLLSCGDDGRVRGWKWREFAESDVSLHLKENHLKPLLELINPQHKGPWGALS 180

Query: 181 PIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQII 240
           P+PE NA++ D QSGS+F+AAGDSCAYCWD+ESGKIKM FKGHSDYLH +V+R++ +QI+
Sbjct: 181 PMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQIL 240

Query: 241 TGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVW 300
           TGSEDGTARIWDCK+GKC+++I  ++DKK +     V  +ALD SESWL C  G++L++W
Sbjct: 241 TGSEDGTARIWDCKTGKCVKVIG-SQDKKSRLR---VSSMALDGSESWLVCGQGKNLALW 300

Query: 301 NLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVA 360
           NLP+SE +      + +QD++F + QIL VGAEP L RFD+NG++LSQI CAP S FS++
Sbjct: 301 NLPASECVQTIPIPAHVQDVMFDEKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSIS 360

Query: 361 LHPSGVAAVGGYGGLVDVISQFGSHLCTF 389
           LHP+GV AVGGYGG+VDVISQFGSHLCTF
Sbjct: 361 LHPAGVVAVGGYGGIVDVISQFGSHLCTF 362

[Close]

BLAST of CmUC03G065170 vs. ExPASy Swiss-Prot
Match: Q5XJS5 (THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-28
Identity = 95/338 (28.11%), Postives = 152/338 (44.97%), Query Frame = 0


Query: 70  VEWLNLRMLFEGFFGCKLVLMA--HY--VPYFSLLAA----------EPHCFLQGHDGPT 129
           VE L++ +  + F  C   L A  +Y  +  FSL AA          +P      HDGP 
Sbjct: 4   VELLHMSVFSQSFSPCGRYLAAGNNYGEIAVFSLSAALSPDASERSQKPILNFTAHDGPV 63

Query: 130 YDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPW 189
           + +        + LLS G +G I  W W E                    L+    K  W
Sbjct: 64  FSLL----STESHLLSAG-NGEISAWSWAE--------------------LIKKSTKAAW 123

Query: 190 ------GALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCI 249
                      IPE NA+  + +  ++    GD+  +  D+E+G  K V KGH+DY+HC+
Sbjct: 124 TRKPNYETSLEIPEINAMIINPKDNNLIVGGGDNNIHIMDMETGTFKSVLKGHTDYIHCL 183

Query: 250 VARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAK-DKKLKGHF-SCVRCIALDASESW 309
             +    +I++G EDG  RIWD ++ + +  I+  K ++  +  F   + C+A D+   W
Sbjct: 184 SFKEREGEILSGGEDGAVRIWDSRTNRPVHCIEVFKYEECARPQFGKWISCLATDS--DW 243

Query: 310 LACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQ 369
           + C  G SLS+W+L S    S        ++ V   + I+ VG  P+++     G+V +Q
Sbjct: 244 MLCGGGPSLSLWHLRSMSPTSVFPLSGCQREAVSYQDLIMSVGEGPYVSHCLHGGTVKAQ 303

Query: 370 IQCAPQSAFSVALHPSG----VAAVGGYGGLVDVISQF 382
           I C+P S  ++AL+       V  VGG    +DV + F
Sbjct: 304 IPCSPSSLNTLALNLKNTEHRVMTVGGSSHQIDVFTNF 314

[Close]

BLAST of CmUC03G065170 vs. ExPASy Swiss-Prot
Match: Q86W42 (THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-26
Identity = 87/360 (24.17%), Postives = 156/360 (43.33%), Query Frame = 0


Query: 31  TAWAPSLNGCPETIVAASSDGSIASYSIASCISKLYLKGVEWLNLRMLFEGFFGCKLVLM 90
           T ++ S++ C + + A ++ G IA +S++S +S    +                      
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSSALSSEAKEE--------------------- 85

Query: 91  AHYVPYFSLLAAEPHCFLQGHDGPTYDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIE 150
                     + +P    Q HDGP Y +   D      LLS G DG ++ W W E     
Sbjct: 86  ----------SKKPVVTFQAHDGPVYSMVSTD----RHLLSAG-DGEVKAWLWAEMLK-- 145

Query: 151 VPIYVQGSHIEPIMDLMNPQYKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDL 210
                     +   +L   Q   P+     +PE NA+    +  S+  A GD   +  DL
Sbjct: 146 ----------KGCKELWRRQ--PPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDL 205

Query: 211 ESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLK 270
           E+G    V +GH+DY+HC+  R    ++++G EDG  R+WD ++ K +Q I+  K ++  
Sbjct: 206 ETGTFTRVLRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECS 265

Query: 271 GHFS--CVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILG 330
              +   + C+A D+   W+ C  G +L++W+L SS   +    R+  + + F  + IL 
Sbjct: 266 RPHNGRWIGCLATDS--DWMVCGGGPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILS 325

Query: 331 VGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVA------AVGGYGGLVDVISQFG 383
            G    + ++ ++G + +Q+  +     S++L+    A         G    VDV +  G
Sbjct: 326 AGQGRCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLG 333

[Close]

BLAST of CmUC03G065170 vs. ExPASy Swiss-Prot
Match: Q5U4D9 (THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.0e-26
Identity = 76/288 (26.39%), Postives = 129/288 (44.79%), Query Frame = 0


Query: 103 EPHCFLQGHDGPTYDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEP 162
           +P      HDGP Y +   D      LLS G DG ++GW W E               + 
Sbjct: 67  KPVVVFHAHDGPVYSMVSTD----RHLLSAG-DGEVKGWLWAEILK------------KG 126

Query: 163 IMDLMNPQYKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGH 222
             +L   Q   P+     +PE NA+    +  S+  A GD   +  DLE+G      +GH
Sbjct: 127 CKELWRRQ--PPYRTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAFTRALRGH 186

Query: 223 SDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS--CVRCIA 282
           +DY+HC+  R    ++++G EDG  R+WD +  K +Q I+  K ++     +   + C+A
Sbjct: 187 TDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLA 246

Query: 283 LDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDI 342
            D+   W+ C  G +L++W+L SS   +    R+  + + F  + IL  G    +  + +
Sbjct: 247 TDS--DWMVCGGGPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQL 306

Query: 343 NGSVLSQIQCAPQSAFSVALHPSGVA------AVGGYGGLVDVISQFG 383
           +G + +Q+  +     S++L+    A         G    VDV +  G
Sbjct: 307 SGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTASGNSCRVDVFTNLG 333

[Close]

BLAST of CmUC03G065170 vs. ExPASy Swiss-Prot
Match: Q6AY87 (THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.0e-26
Identity = 76/288 (26.39%), Postives = 129/288 (44.79%), Query Frame = 0


Query: 103 EPHCFLQGHDGPTYDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEP 162
           +P      HDGP Y +   D      LLS G DG ++GW W E               + 
Sbjct: 67  KPMVTFHAHDGPVYSMVSTD----RHLLSAG-DGEVKGWLWAEILK------------KG 126

Query: 163 IMDLMNPQYKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGH 222
             +L   Q   P+     +PE NA+    +  S+  A GD   +  DLE+G      +GH
Sbjct: 127 CKELWRRQ--PPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGH 186

Query: 223 SDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS--CVRCIA 282
           +DY+HC+  R    ++++G EDG  R+WD +  K +Q I+  K ++     +   + C+A
Sbjct: 187 TDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLA 246

Query: 283 LDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDI 342
            D+   W+ C  G +L++W+L SS   +    R+  + + F  + IL  G    +  + +
Sbjct: 247 TDS--DWMVCGGGPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQL 306

Query: 343 NGSVLSQIQCAPQSAFSVALHPSGVA------AVGGYGGLVDVISQFG 383
           +G + +Q+  +     S++L+    A         G    VDV +  G
Sbjct: 307 SGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTASGNSCRVDVFTNLG 333

[Close]

BLAST of CmUC03G065170 vs. ExPASy TrEMBL
Match: A0A5A7UQQ6 (THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001940 PE=3 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.5e-207
Identity = 351/393 (89.31%), Postives = 363/393 (92.37%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL               G+   K           SLLAAEPHCFLQGHDGPTYDVKF
Sbjct: 61  CISKLQF-------------GYGNTK-----------SLLAAEPHCFLQGHDGPTYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD+GDNTLLLSCGDDGHIRGWRW++CT+IEVPIY+QGSHIEP+MDLMNPQ+KGPWGALSP
Sbjct: 121 YDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS VRCIALDASESWLACADGRSLSVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSLSVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSS+QDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGL+DVISQFGSHLCTFCCQYR
Sbjct: 361 HPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of CmUC03G065170 vs. ExPASy TrEMBL
Match: A0A1S3BQ99 (THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.5e-207
Identity = 351/393 (89.31%), Postives = 363/393 (92.37%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL               G+   K           SLLAAEPHCFLQGHDGPTYDVKF
Sbjct: 61  CISKLQF-------------GYGNTK-----------SLLAAEPHCFLQGHDGPTYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD+GDNTLLLSCGDDGHIRGWRW++CT+IEVPIY+QGSHIEP+MDLMNPQ+KGPWGALSP
Sbjct: 121 YDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS VRCIALDASESWLACADGRSLSVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSLSVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSS+QDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGL+DVISQFGSHLCTFCCQYR
Sbjct: 361 HPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of CmUC03G065170 vs. ExPASy TrEMBL
Match: A0A0A0LWJ2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589670 PE=3 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 5.7e-204
Identity = 346/393 (88.04%), Postives = 361/393 (91.86%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           ML DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL               G+   K           SLLAAEP+CFLQGHDGPTYDVKF
Sbjct: 61  CISKLQF-------------GYGNTK-----------SLLAAEPNCFLQGHDGPTYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD+GDNTLLLSCGDDGHIRGWRW++CT+I+VPI +QGSHIEP+MDL+NPQ+KGPWGALSP
Sbjct: 121 YDNGDNTLLLSCGDDGHIRGWRWRDCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS VRCIALDASESWLACADGRS+SVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSISVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSS+QDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR
Sbjct: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of CmUC03G065170 vs. ExPASy TrEMBL
Match: A0A6J1D376 (THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.5e-199
Identity = 338/393 (86.01%), Postives = 351/393 (89.31%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGSIASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL+              G+   K           S LAAEPHCFLQGHDGP YDVKF
Sbjct: 61  CISKLHF-------------GYSNAK-----------SFLAAEPHCFLQGHDGPAYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           YD GDNTLLLSCGDDGHIRGWRW+ECT+IE+PIY QGSHIEP+MDL NPQYKGPWGALSP
Sbjct: 121 YDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIATDAQ GSIFSAAGDSCAYCWDLES KIKMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVWN 300
           GSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFSC+RCIALDASESWLACADGRSLSVWN
Sbjct: 241 GSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSLSVWN 300

Query: 301 LPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVAL 360
           LPSSEFISKTLTRSSMQDM FCDNQILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVAL
Sbjct: 301 LPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVAL 360

Query: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           HPSGVAAVGGYGGLVDVISQFGSHLCTF CQYR
Sbjct: 361 HPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 369

[Close]

BLAST of CmUC03G065170 vs. ExPASy TrEMBL
Match: A0A6J1F6F8 (THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 7.2e-199
Identity = 336/394 (85.28%), Postives = 357/394 (90.61%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60
           ML DATNWDE AYRES+YKERE+QTRTVFRTAWAPSL+GCPE+IV ASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVKF 120
           CISKL+              G+   K           SLLAAEPHCFLQGHDGPTYDVKF
Sbjct: 61  CISKLH-------------SGYGNTK-----------SLLAAEPHCFLQGHDGPTYDVKF 120

Query: 121 YDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALSP 180
           +D GDNTLLLSCGDDGHIRGWRW ECT+IEVPIY+QGSHIEP+MDLMNPQYKGPWGALSP
Sbjct: 121 FDAGDNTLLLSCGDDGHIRGWRWNECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSP 180

Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           IPENNAIAT+AQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT
Sbjct: 181 IPENNAIATNAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240

Query: 241 GSEDGTARIWDCKSGKCIQLIDPAKD-KKLKGHFSCVRCIALDASESWLACADGRSLSVW 300
           GSEDGTARIWDCK+GKCIQL+DPAKD KK KG+FSCVRCIALDASESWLACADGRS SVW
Sbjct: 241 GSEDGTARIWDCKTGKCIQLLDPAKDNKKQKGNFSCVRCIALDASESWLACADGRSFSVW 300

Query: 301 NLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVA 360
           NLP+S+FIS+TLTRSSMQDMVFCDNQILGVGAEP LTRFDI+GS+LS+IQCAPQSAFSVA
Sbjct: 301 NLPASDFISRTLTRSSMQDMVFCDNQILGVGAEPLLTRFDIHGSILSEIQCAPQSAFSVA 360

Query: 361 LHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 394
           +HPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR
Sbjct: 361 VHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 370

[Close]

BLAST of CmUC03G065170 vs. TAIR 10
Match: AT2G19430.1 (DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 )

HSP 1 Score: 459.1 bits (1180), Expect = 3.5e-129
Identity = 217/389 (55.78%), Postives = 288/389 (74.04%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSIASYSIA 60
           M  DATNW+E  YRESI KEREI+TRTVFRTAWAP      P+  V ASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISKLYLKGVEWLNLRMLFEGFFGCKLVLMAHYVPYFSLLAAEPHCFLQGHDGPTYDVK 120
           S +S+                  FG        Y     ++ AEP   ++ H+GP YDVK
Sbjct: 61  SLVSQ---------------SASFG--------YSKGQDVMVAEPERVVRAHEGPAYDVK 120

Query: 121 FYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQYKGPWGALS 180
           FY + ++ LLLSCGDDG +RGW+W+E    +V ++++ +H++P+++L+NPQ+KGPWGALS
Sbjct: 121 FYGEDEDALLLSCGDDGRVRGWKWREFAESDVSLHLKENHLKPLLELINPQHKGPWGALS 180

Query: 181 PIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQII 240
           P+PE NA++ D QSGS+F+AAGDSCAYCWD+ESGKIKM FKGHSDYLH +V+R++ +QI+
Sbjct: 181 PMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQIL 240

Query: 241 TGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIALDASESWLACADGRSLSVW 300
           TGSEDGTARIWDCK+GKC+++I  ++DKK +     V  +ALD SESWL C  G++L++W
Sbjct: 241 TGSEDGTARIWDCKTGKCVKVIG-SQDKKSRLR---VSSMALDGSESWLVCGQGKNLALW 300

Query: 301 NLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVA 360
           NLP+SE +      + +QD++F + QIL VGAEP L RFD+NG++LSQI CAP S FS++
Sbjct: 301 NLPASECVQTIPIPAHVQDVMFDEKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSIS 360

Query: 361 LHPSGVAAVGGYGGLVDVISQFGSHLCTF 389
           LHP+GV AVGGYGG+VDVISQFGSHLCTF
Sbjct: 361 LHPAGVVAVGGYGGIVDVISQFGSHLCTF 362

[Close]

BLAST of CmUC03G065170 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-11
Identity = 62/219 (28.31%), Postives = 85/219 (38.81%), Query Frame = 0


Query: 104 PHCFLQGHDGPTYDVKFYDDGDNTLLLSCGDDGHIRGWR-WKECTNIEVPIYVQGSHIEP 163
           P   L GH    Y +KF   G  TL+ S   D  I  WR   +C N      V   H   
Sbjct: 45  PIMLLSGHPSAVYTMKFNPAG--TLIASGSHDREIFLWRVHGDCKN----FMVLKGHKNA 104

Query: 164 IMDLMNPQYKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGH 223
           I+DL        W               +    I SA+ D     WD+E+GK       H
Sbjct: 105 ILDL-------HW--------------TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEH 164

Query: 224 SDYLH-CIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCVRCIAL 283
           S +++ C   R     II+GS+DGTA++WD +    IQ   P K +     FS       
Sbjct: 165 SSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFS------- 224

Query: 284 DASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMV 321
           DA++          + VW+L   E    T+T    QD +
Sbjct: 225 DAADKIFTGGVDNDVKVWDLRKGE---ATMTLEGHQDTI 225

[Close]

BLAST of CmUC03G065170 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 7.2e-10
Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 187 IATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGT 246
           +A  + +  I SA+ D     WD+E+G +     GH++Y  C+      N I++GS D T
Sbjct: 77  VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136

Query: 247 ARIWDCKSGKCIQLIDPAKD 267
            RIWD  +GKC++++    D
Sbjct: 137 VRIWDVTTGKCLKVLPAHSD 156

[Close]

BLAST of CmUC03G065170 vs. TAIR 10
Match: AT3G16650.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 4.7e-09
Identity = 39/165 (23.64%), Postives = 65/165 (39.39%), Query Frame = 0


Query: 181 IPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIIT 240
           I +   +A   +   +FSA  D    CWDLE  K+   + GH   ++C+    T++ ++T
Sbjct: 212 IGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLT 271

Query: 241 GSEDGTARIWDCKSGKCI-------------------QLIDPAKDKKLK----------- 300
           G  D   R+WD ++   I                   Q+I  + D  +K           
Sbjct: 272 GGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMA 331

Query: 301 ---GHFSCVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLT 313
               H   VR +AL   E+    A   ++  ++LP  EF    L+
Sbjct: 332 TITNHKKTVRAMALHPKENDFVSASADNIKKFSLPKGEFCHNMLS 376

[Close]

BLAST of CmUC03G065170 vs. TAIR 10
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-08
Identity = 38/153 (24.84%), Postives = 64/153 (41.83%), Query Frame = 0


Query: 111 HDGPTYDVKFYDDGDNTLLLSCGDDGHIRGWRWKECTNIEVPIYVQGSHIEPIMDLMNPQ 170
           HD P   + F    D+ +L S   DG I+ WR        V I    +H + +       
Sbjct: 262 HDDPVLCIDF--SRDSEMLASGSQDGKIKIWR----IRTGVCIRRFDAHSQGV------- 321

Query: 171 YKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIV 230
                          +++       + S + D  A    L+SGK+   F+GH+ Y++  +
Sbjct: 322 --------------TSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAI 381

Query: 231 ARNTVNQIITGSEDGTARIWDCKSGKCIQLIDP 264
             +  ++IIT S D T ++WD K+  C+Q   P
Sbjct: 382 FTSDGSRIITASSDCTVKVWDSKTTDCLQTFKP 387

The following BLAST results are available for this feature:

BLAST of CmUC03G065170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880261.1	1.0e-207	90.08	THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex...	[more]
XP_008450878.1	5.1e-207	89.31	PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subuni...	[more]
KAG7021946.1	1.2e-205	86.25	THO complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588052.1	1.1e-204	86.22	THO complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004144008.1	1.2e-203	88.04	THO complex subunit 6 [Cucumis sativus] >KGN66260.1 hypothetical protein Csa_007...	[more]

BLAST of CmUC03G065170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4M1	4.9e-128	55.78	THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1	[more]
Q5XJS5	1.5e-28	28.11	THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1	[more]
Q86W42	1.8e-26	24.17	THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1	[more]
Q5U4D9	7.0e-26	26.39	THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1	[more]
Q6AY87	7.0e-26	26.39	THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1	[more]

BLAST of CmUC03G065170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQQ6	2.5e-207	89.31	THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A1S3BQ99	2.5e-207	89.31	THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1	[more]
A0A0A0LWJ2	5.7e-204	88.04	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1D376	2.5e-199	86.01	THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1	[more]
A0A6J1F6F8	7.2e-199	85.28	THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1	[more]

BLAST of CmUC03G065170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19430.1	3.5e-129	55.78	DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1	[more]
AT2G43770.1	5.0e-11	28.31	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	7.2e-10	33.75	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G16650.1	4.7e-09	23.64	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G73720.1	1.4e-08	24.84	transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 212..251 e-value: 1.8E-6 score: 37.5 coord: 341..379 e-value: 63.0 score: 5.7 coord: 262..300 e-value: 0.42 score: 19.4 coord: 101..142 e-value: 8.0E-5 score: 32.0 coord: 174..209 e-value: 390.0 score: 0.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 108..141 e-value: 0.018 score: 15.9 coord: 267..300 e-value: 2.9E-4 score: 21.6 coord: 215..251 e-value: 5.6E-4 score: 20.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 108..141 score: 9.138305
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 219..260 score: 13.148488
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 13..171 e-value: 7.3E-10 score: 40.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 182..390 e-value: 4.9E-25 score: 89.8
IPR042626	THO complex subunit 6	PANTHER	PTHR44411	THO COMPLEX SUBUNIT 6 HOMOLOG	coord: 9..390
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 219..251 score: 10.126507
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 40..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G065170.1	CmUC03G065170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0000347	THO complex
molecular_function	GO:0005515	protein binding