CmUC03G063640 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G063640
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Ribosome biogenesis regulatory protein
Location	CmU531Chr03: 27110210 .. 27113849 (-)
RNA-Seq Expression	CmUC03G063640
Synteny	CmUC03G063640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAATTCTCAGTATCCGAGCAGCCCTCAGTAGTCTGCAGTTTACAAGCGCCCGCCTCAAATTGCATTTTAGAATCTTCAAAAACTCATAATCGGAAAAGCTAGAAAGTTGGTCGGAGCATGGAGATCGAAAATCAACCTCCGTTTCAGATCGACCTTGGTAATCTAACGGCGTTCAATCCTCACCATCAATTTCCTTCCCTTTCCTCCTCCAGGTGAGTTGTTCTTCGCTCCCAAAACATGTTTGGACACCACTGATTCTTCCTGGCATTTTGCATTTCTCTCTCGTTTTTTTTGAACTTCATTTCTTAGTAGGAAGATAAATAAGTGGTTTGTAGCGATTTCTCATTTCTGAGTTTCTCTTGTTCTGTCTCACTGGTTGAAGAACAACTGGCGTGGTGTAGTTTGGCTTTGGGATATTATAATATGCACATCTCGTTGTACTATTTTCTGAACTTTGGTGGTGAAGATTACATGCTTGCCTGTGTTTTTCCGTTTCTGCATATGTGACTTCGAAGTGTTGCGTTCTTGTCAATCCAATTAGAAATATCTAACTTATGAATCCTTAGCTTCCTTCTGTTTGAGGCTCTCTTCAATGTTTGAAACACATAATTGCTTCTTTTATTTGAACAGGACCTGAGTAACCTCAAAAAAATTTCGTCTTTCACACCTAGTAGTACCTTTTTGGAGAATCGTTGAAATATTCTTCTGTCTTTCCCAGCCAACATCGAACCGAAATTCGAATAAAATTTTAACTTCTTTTCATCCCACATCCAAATCATGGATTTTTTTGGGCTTTCGGATGATTCTTGGCCAGAAGAAAGTCTAAGATCGTATGTAATCTTTTCTAAATCTTAATCTTTCCCAAAATTAAACAGAAGATTTAGAAATTCATAAGAGTAAAATTTGAAGATTTGTTATAAGATTTGGGAAACACATACTGACATACAATCTTGGTGTTCATGTTGGCCGAGATTCTATTGAGAAAGCCCAAAGAAATAGATAATTTGAATTCAGGGTCGATCTTGGTCGGGAAGGACTGAGGAAAATTAGTTCAATGAGTTCTCCAAAAGGGTGCTAGTTGTGAAAAATGAAAACATTTGAGGGTTATTTCTAACAAATTCCTATTATCTTTGCTTAGTTTTAGTTATCTATTTATTTTAATTTGATTACTAGGGAGGATCTAGTGAATGAATGTCTGCAAAAGGGAACAGAGTTAGTTCAATTTATTGCCAATGATCTATTCAACCTACCTTCAACCGAAGACAGAGATGGTCCCCTTGTGAAGCTGCCTCCACCTACTACAAGATTGCCGAGAGAGAAACCTGTAAGGCCTCGTGCCCCTCTATCATCTCGTTTGCTTCTCTTTCAATCTATATGATTTCTTCCCTTGGTAACAATCGTCATTGTCTGTACTGTGTCCAATAGAAGTGCCTGCAAACGTTAATTCTATAGTTTTCGGCTGAGATGATCTTTTCTTTTCCTTTTCTAGCTTCCAAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCGCAAAAAAAAGGTTAGTTGTTTGACATGCACCCAATGCTAGGGTATATTTGATAGAGCAATAGCATATTCCCTCCCATCCAATACAAGGGATAAAACAACTGAAAGAAGAAATAGCATCACTAATTTAGTTAATTTGATAACTATCTATTTTTTGTTCATAATTATTATTTTTTAAAAATTTTCCAGGCATAAAGAATCGTAAAAAAGATAAGAGAGTGTATGATGAACAGACGGGTACATGGAAACATCGCCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATAATTGAGGCCAAGATGACTGATGGTAGTATTTTTATTTTATAATTAATCCTTCTACTGGTTATTCTACTTTTTTTTTGGTTTGTTTTTGTTTTTGTGAACTTCATTCAATTTGCACTAAGTTGGAATATCCAAATAATCGACTGTTTATTGCAATTCCTTACTCGCTGCACTTTATGCTTATGACACATTAAAAGTGCTGAAATGGCTGTTAAGTATCATGGTTGATTCGTCTTGCAGAGCCTGGGGTGGATCCATTTGCTGCAAGGCGAGCCAATAAGAAAAGTCGAGTTGAAAAGCAAGAAAAGAATCGATTACAGAATTTGAAGGAAGCTGCAAAAGTTGGCGCTCTACCCAGGTTTTCCTCCTATGACTGTTTTGGTTGCTGACATAATTTCTGCCACACTTCGTTCAACCTCAGTTTATACATGATTTTCATTGAATTTTGTAACTTGATCAATATCTTTTCCAAAATGTTTTGGTCAACTATTAGATTGAGACATTATCCACGTTGTTGTTCTCATGTTTTGCATTATAGTGGTCATCTTCATTCATATCTTCCTTTCCTCACACAATCTATTCTTGATGTCATACAATTCACTGTTTCAGCCACATCCAACTAGCTGCCACTGCTTTGCCTATAACGGGAACTCAAGCTGCACCTAAGAAAATTACCAAGGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTGGCAGGAGAAAAACCTCCTAAACATCAAGGAAAATATCGCAAGGTTAATCAAATAAGCCTGTTGATCTGCAGTTATGCTATGGTTTACTTTTTATTTCTCGTAAAAAGTTCTGATGCATTTTTTTGTGTTTGCATGCAGTTTCTGCCTGTTGTGGAAGGAACAGGGATAGGTTCTCAAGAAAGAGAGCAAACTGAGAAAGTTCTTAACAGATTAATTGCCAAGAACTCACACGATATTCTCAACATTAATAAGGTTTGACTGCTGAACTGCATATCTCTACTTGTTAAAAATGACAAATAGATGCATATATTTTGTTTTATGCACTTCTATGGTTTTTAAACGATCGATCATTAGTACAAATGACATGACATCAATCATTGTTATCTCTTCTTCTAAATTGGACTTAGTAGATGCTGTATTACATTTTTTATATTAGATGATTTACATGGTTGCAAATGGACCTTGTGATAAATATTTAGGTATGATTTATCCTCCGAGTACCGGCAATTAGTCTTAGACTAGAAAAGAAGGGCTTTTCTAATCACATTAAATTCTAAGCGTTTTGGGATTGTTTTATTTTATCAACTTTTTCTAGTAAGTGAGAATTTAAATCTCCGGCCTTGAGTGAAAGAGTACATGCCAATCATTGCTTAGCTATGCTTGTTTTTGACGTTTTAGAATGATGTATTTCTAAGCCTATTATGGATTCTTCATCTTTATTTTCAGGCTGTGAACATGTACAACGTGAAAAAAGAAAAGAAACAAAGAAACCAACAAGGAAAGTCTTCATCGATGTCGAGCAAGTTGAAGCCAAATAAGAAACTCCAGAAAAAGCCATCGAAGAAGGGATCTTCAAAGCATGGAAAGGCAAAATGATTACATTTTGGTTGAAGTTTTGAATGTTGTAACATCATTTTCATTATTTAGTAGTGAAGTGAAGGAATATCAGTTATCTAAAAAATTTCTTTTTCCCTAACTCATCTCTCCCATGAGATAAAAGCAATTTTGTAAAATTTTATTTCAGCGGTGAATTCCTGCCCAATGCTAAGCTAATGCCATTTTGCC

mRNA sequence

TTCAAATTCTCAGTATCCGAGCAGCCCTCAGTAGTCTGCAGTTTACAAGCGCCCGCCTCAAATTGCATTTTAGAATCTTCAAAAACTCATAATCGGAAAAGCTAGAAAGTTGGTCGGAGCATGGAGATCGAAAATCAACCTCCGTTTCAGATCGACCTTGGTAATCTAACGGCGTTCAATCCTCACCATCAATTTCCTTCCCTTTCCTCCTCCAGGGAGGATCTAGTGAATGAATGTCTGCAAAAGGGAACAGAGTTAGTTCAATTTATTGCCAATGATCTATTCAACCTACCTTCAACCGAAGACAGAGATGGTCCCCTTGTGAAGCTGCCTCCACCTACTACAAGATTGCCGAGAGAGAAACCTCTTCCAAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCGCAAAAAAAAGGCATAAAGAATCGTAAAAAAGATAAGAGAGTGTATGATGAACAGACGGGTACATGGAAACATCGCCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATAATTGAGGCCAAGATGACTGATGGTAAGCCTGGGGTGGATCCATTTGCTGCAAGGCGAGCCAATAAGAAAAGTCGAGTTGAAAAGCAAGAAAAGAATCGATTACAGAATTTGAAGGAAGCTGCAAAAGTTGGCGCTCTACCCAGCCACATCCAACTAGCTGCCACTGCTTTGCCTATAACGGGAACTCAAGCTGCACCTAAGAAAATTACCAAGGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTGGCAGGAGAAAAACCTCCTAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAAGGAACAGGGATAGGTTCTCAAGAAAGAGAGCAAACTGAGAAAGTTCTTAACAGATTAATTGCCAAGAACTCACACGATATTCTCAACATTAATAAGGCTGTGAACATGTACAACGTGAAAAAAGAAAAGAAACAAAGAAACCAACAAGGAAAGTCTTCATCGATGTCGAGCAAGTTGAAGCCAAATAAGAAACTCCAGAAAAAGCCATCGAAGAAGGGATCTTCAAAGCATGGAAAGGCAAAATGATTACATTTTGGTTGAAGTTTTGAATGTTGTAACATCATTTTCATTATTTAGTAGTGAAGTGAAGGAATATCAGTTATCTAAAAAATTTCTTTTTCCCTAACTCATCTCTCCCATGAGATAAAAGCAATTTTGTAAAATTTTATTTCAGCGGTGAATTCCTGCCCAATGCTAAGCTAATGCCATTTTGCC

Coding sequence (CDS)

ATGGAGATCGAAAATCAACCTCCGTTTCAGATCGACCTTGGTAATCTAACGGCGTTCAATCCTCACCATCAATTTCCTTCCCTTTCCTCCTCCAGGGAGGATCTAGTGAATGAATGTCTGCAAAAGGGAACAGAGTTAGTTCAATTTATTGCCAATGATCTATTCAACCTACCTTCAACCGAAGACAGAGATGGTCCCCTTGTGAAGCTGCCTCCACCTACTACAAGATTGCCGAGAGAGAAACCTCTTCCAAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCGCAAAAAAAAGGCATAAAGAATCGTAAAAAAGATAAGAGAGTGTATGATGAACAGACGGGTACATGGAAACATCGCCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATAATTGAGGCCAAGATGACTGATGGTAAGCCTGGGGTGGATCCATTTGCTGCAAGGCGAGCCAATAAGAAAAGTCGAGTTGAAAAGCAAGAAAAGAATCGATTACAGAATTTGAAGGAAGCTGCAAAAGTTGGCGCTCTACCCAGCCACATCCAACTAGCTGCCACTGCTTTGCCTATAACGGGAACTCAAGCTGCACCTAAGAAAATTACCAAGGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTGGCAGGAGAAAAACCTCCTAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAAGGAACAGGGATAGGTTCTCAAGAAAGAGAGCAAACTGAGAAAGTTCTTAACAGATTAATTGCCAAGAACTCACACGATATTCTCAACATTAATAAGGCTGTGAACATGTACAACGTGAAAAAAGAAAAGAAACAAAGAAACCAACAAGGAAAGTCTTCATCGATGTCGAGCAAGTTGAAGCCAAATAAGAAACTCCAGAAAAAGCCATCGAAGAAGGGATCTTCAAAGCATGGAAAGGCAAAATGA

Protein sequence

MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPSTEDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKHRHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGALPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQGKSSSMSSKLKPNKKLQKKPSKKGSSKHGKAK

Homology

[Close]

BLAST of CmUC03G063640 vs. NCBI nr
Match: XP_038878495.1 (ribosome biogenesis regulatory protein homolog [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 5.8e-164
Identity = 307/331 (92.75%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQ PFQ+DLGNL AFNPHH FPSL SSRE+LVNECLQKGTELVQFIANDLFNLPST
Sbjct: 1   MEIENQHPFQVDLGNLMAFNPHHHFPSLPSSREELVNECLQKGTELVQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIK RKKDKRVYDEQ GTWK 
Sbjct: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKKRKKDKRVYDEQAGTWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDEENIPIIEAKMTD +PG DPFAARRA+KK RVEKQEKNRLQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEENIPIIEAKMTD-EPGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKL GEKP KHQG
Sbjct: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLTGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQE+EQTEKVLNRLI+KNSH+ILN++KAVNMYNVKKEKKQRNQ+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSHEILNVSKAVNMYNVKKEKKQRNQRG 300

Query: 301 KSSSMSSKLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSSKLKPNKKLQKKP KKGSSKHGKAK
Sbjct: 301 KSSSMSSKLKPNKKLQKKPLKKGSSKHGKAK 330

[Close]

BLAST of CmUC03G063640 vs. NCBI nr
Match: XP_022933585.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933586.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933587.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >KAG6588164.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 578.6 bits (1490), Expect = 3.5e-161
Identity = 303/332 (91.27%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLGNL AFNPHHQ+PSLSSSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QTG+WK 
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDEENIPIIEAKMTD +PGVDPFAARRANKK+RVEKQE+N+LQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEENIPIIEAKMTD-EPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKP KHQG
Sbjct: 181 LPSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQEREQTEKVLNRLI+KNSH+ILNINKAVNMYNVKKEKKQRNQ+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRG 300

Query: 301 KSSSMSS-KLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSS KLKPNKKLQKKP KKGSSK+GKAK
Sbjct: 301 KSSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of CmUC03G063640 vs. NCBI nr
Match: XP_022967754.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967763.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967772.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967782.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 578.2 bits (1489), Expect = 4.6e-161
Identity = 303/332 (91.27%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLGNL AFNPHH+FPSLSSSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QTG+WK 
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDEENIPIIEAKMTD +PGVDPFAARRANKK+RVEKQE+N+LQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEENIPIIEAKMTD-EPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKP KHQG
Sbjct: 181 LPSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQEREQTEKVLNRLI+KNSH+ILNINKAVNMYNVKKEKKQRNQ+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRG 300

Query: 301 KSSSMSS-KLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSS KLKPNKKLQKKP KKGSSK+GKAK
Sbjct: 301 KSSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of CmUC03G063640 vs. NCBI nr
Match: XP_023531368.1 (ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531369.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531371.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531372.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531373.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.5 bits (1482), Expect = 3.0e-160
Identity = 303/332 (91.27%), Postives = 319/332 (96.08%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME ENQ PFQIDLGNL AFNPHHQFPSLSSSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   METENQQPFQIDLGNLMAFNPHHQFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QTG+WK 
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDEENIPIIEAKMTD +PGVDPFAARRANKKSRVEKQE+N+LQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEENIPIIEAKMTD-EPGVDPFAARRANKKSRVEKQERNQLQNLKKAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKP KHQG
Sbjct: 181 LPSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQEREQTEKVLNRLI+KNSH+ILNINKAVNMY VKKEKKQRNQ+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYTVKKEKKQRNQRG 300

Query: 301 KSSSMSS-KLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSS KLKPNKKLQKKP KKGS K+GKAK
Sbjct: 301 KSSSMSSNKLKPNKKLQKKPLKKGSPKNGKAK 331

[Close]

BLAST of CmUC03G063640 vs. NCBI nr
Match: XP_004149022.1 (ribosome biogenesis regulatory protein homolog [Cucumis sativus] >KGN66432.1 hypothetical protein Csa_007676 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 2.5e-159
Identity = 304/331 (91.84%), Postives = 316/331 (95.47%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQ PFQIDLG+L AFNPHHQFPSL SSREDLV+ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQT TWK 
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDE+NIPIIEAKMTD + G DPFAARRA+KK RVEKQEKNRLQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTD-ESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKP KHQG
Sbjct: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGS+EREQTEKVL+RLI+KNSH+ILN+NKAVNMYNVKKEKKQRN QG
Sbjct: 241 KYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN-QG 300

Query: 301 KSSSMSSKLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSSKLKPNKKLQKKP KKGSSK GKAK
Sbjct: 301 KSSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of CmUC03G063640 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-110
Identity = 212/321 (66.04%), Postives = 258/321 (80.37%), Query Frame = 0


Query: 2   EIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPSTE 61
           E+E +  +Q+D+GNL AFNP+H+FPS  SSR +LV E L +GT+LVQ IAN LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKHR 121
             DGP+V+LPPPTT+LPREK +P+PKPPTKWE FA KKGI+ RKK+K V+DEQT  +K R
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGAL 181
           HGYDR ND+ ++PIIEAK +D +PGVDPFA R  +KK RV KQEKNRLQNLK A K GAL
Sbjct: 124 HGYDRVNDDNDVPIIEAKESD-EPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGAL 183

Query: 182 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQGK 241
           PSH+QLAAT+LPI+GT+A PKKI KDELG+VAG+AATSTASGGKFDKKL GEKPPK QGK
Sbjct: 184 PSHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGK 243

Query: 242 YRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQGK 301
           + K+LPVV G G  + E+EQT  VL+++ +K+SH+ILN+ KA+NMYNVKKEKK+      
Sbjct: 244 HHKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------ 303

Query: 302 SSSMSSKLKPNKKLQKKPSKK 323
            S  S KLKP K + KKP+ K
Sbjct: 304 -SGRSDKLKPKKDITKKPANK 316

[Close]

BLAST of CmUC03G063640 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30
Identity = 115/329 (34.95%), Postives = 165/329 (50.15%), Query Frame = 0


Query: 3   IENQPPFQIDLGNLTAF--NPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 62
           +  +   Q DLGNL A   NP         + E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQL---LINQLWQLPTE 85

Query: 63  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 122
              +  + +LP PTTRLPREKPLP+P+P T+W+ FA+ KGI+ +KK   V+DE +G W+ 
Sbjct: 86  RVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 123 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 182
           R GY RA D+    +IE    +  P  D FA R   KK RV K E NRL+NL  A K+  
Sbjct: 146 RWGYQRARDDTKEWLIEVP-GNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-Q 205

Query: 183 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 242
           LPS     A  L  TG Q      +K+ELG    +A  STAS G+F ++L  EK P+  G
Sbjct: 206 LPS-----AAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSG 265

Query: 243 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILN-INKAVNMYNVKKEKKQRNQQ 302
           K RKF P+        + + +  +V+N    K   D+    NK +   + ++  K+R   
Sbjct: 266 KKRKFQPLFGDFAAEKKNQLELLRVMNS--KKPQLDVTRATNKQMREEDQEEAAKRRKMS 325

Query: 303 GKSSSMSSKLKPNKKLQKKPSKKGSSKHG 329
            K      +  P  K +  P  +G  + G
Sbjct: 326 QKGKRKGGRQGPGGKRKGGPPSQGGKRKG 336

[Close]

BLAST of CmUC03G063640 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 112/329 (34.04%), Postives = 164/329 (49.85%), Query Frame = 0


Query: 3   IENQPPFQIDLGNLTAF--NPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 62
           +  +   + DLGNL A   NP         S E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LINQLWRLPTE 85

Query: 63  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 122
              +  + +LP P TRLPREKPLP+P+P T+W+ FA+ KGI+ +KK   V+DE +G W+ 
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRR 145

Query: 123 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 182
           R GY RA D+    +IE       P  D FA R   KK RV K E NRL+NL  A K+  
Sbjct: 146 RWGYKRARDDTKEWLIEVP-GSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-Q 205

Query: 183 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 242
           +PS     +  L  TG Q      +K+ELG    +A  STAS G+F ++L  EK P+  G
Sbjct: 206 MPS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSG 265

Query: 243 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILN-INKAVNMYNVKKEKKQRNQQ 302
           K RKF P+        + + +  +V+N    K   D+    NK +   + ++  K+R   
Sbjct: 266 KKRKFQPLFGDFAAEKKNQLELLRVMNS--KKPRLDVTRATNKQMREEDQEEAAKRRKMS 325

Query: 303 GKSSSMSSKLKPNKKLQKKPSKKGSSKHG 329
            K      +  P+ K +  P  +G  + G
Sbjct: 326 QKGKRKGGRQGPSGKRKGGPPGQGEKRKG 336

[Close]

BLAST of CmUC03G063640 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-29
Identity = 111/329 (33.74%), Postives = 164/329 (49.85%), Query Frame = 0


Query: 3   IENQPPFQIDLGNLTAF--NPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 62
           +  +   + DLGNL A   NP         S E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LVNQLWQLPTE 85

Query: 63  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 122
              +  + +LP P TRLPREKPLP+P+P T+W+ FA+ KGI+ +KK   V+DE +G W+ 
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 123 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 182
           R GY RA D+    +IE       P  D FA R   KK RV K E NRL+NL  A K+  
Sbjct: 146 RWGYKRARDDTKEWLIEVP-GSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-Q 205

Query: 183 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 242
           +PS     +  L  TG Q      +K+ELG    +A  STAS G+F ++L  EK P+  G
Sbjct: 206 MPS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSG 265

Query: 243 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILN-INKAVNMYNVKKEKKQRNQQ 302
           K RKF P+        + + +  +V+N    K   D+    NK +   + ++  K+R   
Sbjct: 266 KKRKFQPLFGDFAAEKKNQLELLRVMNS--KKPQLDVTRATNKQMREEDQEEAAKRRKMS 325

Query: 303 GKSSSMSSKLKPNKKLQKKPSKKGSSKHG 329
            K      +  P+ + +  P  +G  + G
Sbjct: 326 QKGKKKGGRQGPSGRRKGGPPSQGEKRKG 336

[Close]

BLAST of CmUC03G063640 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.7e-29
Identity = 115/325 (35.38%), Postives = 173/325 (53.23%), Query Frame = 0


Query: 10  QIDLGNLTAF--NPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPSTEDRDGPL 69
           + DLGNL A   NP         ++E  +    +  T+L   + N L+ LP+    +  +
Sbjct: 33  EFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQL---LINQLWQLPTERVEEALV 92

Query: 70  VKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKHRHGYDRA 129
            +LP P+TRLPREKP+P+P+P T+W+ FA+ KGI+ +KK   V+DE +G W+ R GY RA
Sbjct: 93  ARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWGYQRA 152

Query: 130 NDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGALPSHIQL 189
            D+    +IE    +  P  D FA R   KK RV K E NRL+NL  A K+  LPS    
Sbjct: 153 RDDTKEWLIEVP-GNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS---- 212

Query: 190 AATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQGKYRKFLP 249
            A  +  TG Q      +K+ELG    +A  STAS G+F ++L  EK P+  GK RKF P
Sbjct: 213 -AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQP 272

Query: 250 VVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQGKSSSMSS 309
           +    G  + ER+   ++L  + +K     ++I +A N   +++E ++   + +  S   
Sbjct: 273 LF---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATNK-QMREEDQEEAAKRRKMSQKG 332

Query: 310 KLKPNKKLQKKPSKKGS-SKHGKAK 332
           K K  ++      K G+ S+ GK K
Sbjct: 333 KRKGGRQGPGSKRKGGTPSQGGKRK 335

[Close]

BLAST of CmUC03G063640 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161
Identity = 303/332 (91.27%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLGNL AFNPHHQ+PSLSSSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QTG+WK 
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDEENIPIIEAKMTD +PGVDPFAARRANKK+RVEKQE+N+LQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEENIPIIEAKMTD-EPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKP KHQG
Sbjct: 181 LPSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQEREQTEKVLNRLI+KNSH+ILNINKAVNMYNVKKEKKQRNQ+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRG 300

Query: 301 KSSSMSS-KLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSS KLKPNKKLQKKP KKGSSK+GKAK
Sbjct: 301 KSSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of CmUC03G063640 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.2e-161
Identity = 303/332 (91.27%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLGNL AFNPHH+FPSLSSSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QTG+WK 
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDEENIPIIEAKMTD +PGVDPFAARRANKK+RVEKQE+N+LQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEENIPIIEAKMTD-EPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKP KHQG
Sbjct: 181 LPSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQEREQTEKVLNRLI+KNSH+ILNINKAVNMYNVKKEKKQRNQ+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRG 300

Query: 301 KSSSMSS-KLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSS KLKPNKKLQKKP KKGSSK+GKAK
Sbjct: 301 KSSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of CmUC03G063640 vs. ExPASy TrEMBL
Match: A0A0A0LZY0 (Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G605610 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 304/331 (91.84%), Postives = 316/331 (95.47%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQ PFQIDLG+L AFNPHHQFPSL SSREDLV+ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQT TWK 
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDE+NIPIIEAKMTD + G DPFAARRA+KK RVEKQEKNRLQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTD-ESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKP KHQG
Sbjct: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGS+EREQTEKVL+RLI+KNSH+ILN+NKAVNMYNVKKEKKQRN QG
Sbjct: 241 KYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN-QG 300

Query: 301 KSSSMSSKLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSSMSSKLKPNKKLQKKP KKGSSK GKAK
Sbjct: 301 KSSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of CmUC03G063640 vs. ExPASy TrEMBL
Match: A0A5A7TFQ4 (Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00350 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.7e-157
Identity = 297/331 (89.73%), Postives = 312/331 (94.26%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQ PFQIDLG+L AFNPHHQFPS+  SRE+L++ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLV+LPPPTTRLPREKPLPKPKPPTKWELFA KKGIK RKKDKRVYDEQT TWK 
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDE+NIPIIEAKMTD + G DPFAARRA+KK RVEKQEKNRLQNLK+AAKVGA
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTD-ESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKP KHQG
Sbjct: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGS+EREQTEKVL+RLI+KNSH+ILN+NKAVNMYNVKKEKKQRNQQG
Sbjct: 241 KYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQG 300

Query: 301 KSSSMSSKLKPNKKLQKKPSKKGSSKHGKAK 332
           KSSS SSKLK NKKLQKKP KKGSSK GKAK
Sbjct: 301 KSSSSSSKLKANKKLQKKPLKKGSSKQGKAK 330

[Close]

BLAST of CmUC03G063640 vs. ExPASy TrEMBL
Match: A0A6J1DJD9 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111021449 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 287/326 (88.04%), Postives = 307/326 (94.17%), Query Frame = 0


Query: 1   MEIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME ENQ PFQIDLGNLTAFNPHHQFPS  SSREDLVNECLQKG ELVQFIAN+LFN PST
Sbjct: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60

Query: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKH 120
           EDRDGPLVKLPPPTT+LPREK LPKPKPPTKWELFA+K+GIKNRK+DK  YDEQTGTW+ 
Sbjct: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120

Query: 121 RHGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGA 180
           RHGYDRANDE+NIPIIEAKMTD +PG DPFA RRANKK+RVEKQEKNRL+NLK+AAKVGA
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTD-EPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGA 180

Query: 181 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQG 240
           LPSH+QLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKLAGEKP KHQG
Sbjct: 181 LPSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQG 240

Query: 241 KYRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQG 300
           KYRKFLPVVEGTGIGSQE+EQTEKVLNRLI++NSH+ILNINKAVNMYNVK+EKKQ+ Q+G
Sbjct: 241 KYRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRG 300

Query: 301 KSSSMSSKLKPNKKLQKKPSKKGSSK 327
           KSSSMSSKLKPNKKLQKK  KKGSSK
Sbjct: 301 KSSSMSSKLKPNKKLQKKSLKKGSSK 325

[Close]

BLAST of CmUC03G063640 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 401.0 bits (1029), Expect = 9.4e-112
Identity = 212/321 (66.04%), Postives = 258/321 (80.37%), Query Frame = 0


Query: 2   EIENQPPFQIDLGNLTAFNPHHQFPSLSSSREDLVNECLQKGTELVQFIANDLFNLPSTE 61
           E+E +  +Q+D+GNL AFNP+H+FPS  SSR +LV E L +GT+LVQ IAN LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTGTWKHR 121
             DGP+V+LPPPTT+LPREK +P+PKPPTKWE FA KKGI+ RKK+K V+DEQT  +K R
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEENIPIIEAKMTDGKPGVDPFAARRANKKSRVEKQEKNRLQNLKEAAKVGAL 181
           HGYDR ND+ ++PIIEAK +D +PGVDPFA R  +KK RV KQEKNRLQNLK A K GAL
Sbjct: 124 HGYDRVNDDNDVPIIEAKESD-EPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGAL 183

Query: 182 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPPKHQGK 241
           PSH+QLAAT+LPI+GT+A PKKI KDELG+VAG+AATSTASGGKFDKKL GEKPPK QGK
Sbjct: 184 PSHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGK 243

Query: 242 YRKFLPVVEGTGIGSQEREQTEKVLNRLIAKNSHDILNINKAVNMYNVKKEKKQRNQQGK 301
           + K+LPVV G G  + E+EQT  VL+++ +K+SH+ILN+ KA+NMYNVKKEKK+      
Sbjct: 244 HHKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------ 303

Query: 302 SSSMSSKLKPNKKLQKKPSKK 323
            S  S KLKP K + KKP+ K
Sbjct: 304 -SGRSDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of CmUC03G063640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878495.1	5.8e-164	92.75	ribosome biogenesis regulatory protein homolog [Benincasa hispida]	[more]
XP_022933585.1	3.5e-161	91.27	ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_02293358...	[more]
XP_022967754.1	4.6e-161	91.27	ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967763....	[more]
XP_023531368.1	3.0e-160	91.27	ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_004149022.1	2.5e-159	91.84	ribosome biogenesis regulatory protein homolog [Cucumis sativus] >KGN66432.1 hyp...	[more]

BLAST of CmUC03G063640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	1.3e-110	66.04	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q15050	1.8e-30	34.95	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
Q9CYH6	1.1e-29	34.04	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	1.5e-29	33.74	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q2KIH4	9.7e-29	35.38	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]

BLAST of CmUC03G063640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F066	1.7e-161	91.27	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HW20	2.2e-161	91.27	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]
A0A0A0LZY0	1.2e-159	91.84	Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G60561...	[more]
A0A5A7TFQ4	5.7e-157	89.73	Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1DJD9	1.3e-153	88.04	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmUC03G063640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	9.4e-112	66.04	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..165
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..320
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 8..172 e-value: 1.5E-54 score: 184.3
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G063640.1	CmUC03G063640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus