Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTGAAGAAAATGCTGCAAACTTTAAACTCGGATTTGGTCCTAATTCAAGAGACAAAAAGGGAATCCTTTGATCCTAACTTCATAAAATTGCTATGGAGTTCGAAGGACATAGGCTGGATTTTTATTGAAGCCTATGGAAAATCTGGAGGTATACTTACGATGTGGGATGAGAGCAAATTATCAGTTGAAGAAACATTAAAAGGTGGCTTCACCCTGACAGTCAAGTGCATATCAATTTGTAGAAAGAGCTGTTGGGTAACAAACATTTATGGCCCTACCGATTACAAGGAGAGGAACAAACTTTGGCTTGAATTAGCTTCCCTCTCTGGCTATTGCTCAGGACCATGGTGCATTAGAGGAGACTTTAATATGACTAGAAGAATACAGGAAAGATATCCAATCGGAAGACTTACAAAAGGAATGAAGAAGTTCAATAAGTTCATTGCCGACTCAAAATTACTAGAAATTCACCTCACAAACGGCAAGTTTACTTGGTCAAGAGAAGGAAGAGCGATCTCTAGATCACTAATAGACTGTTTTTTAGTCTCCAATGATTGGGAGGATTCCTTCGAAAACTCTAGAGTCTCAAGACAAACAAGAGTTTTTTCTGATCATTTTCCAATCCTCTTGGAAGCAGGCTCATTTGAATGGGGTCCTTCTCCCTTTCGTTTTTGCAATAGTTGGCAGTCTGACAAAAGTCGTCGATTAATTGGAAGATCACTCAGTGAATTCAGTGGTCAAGGATGGGTGGGTTTCATGCTAATTACCAGACTGAGAAATCTAAAGCTGATTCTATAG
mRNA sequence
ATGACTTTGAAGAAAATGCTGCAAACTTTAAACTCGGATTTGGTCCTAATTCAAGAGACAAAAAGGGAATCCTTTGATCCTAACTTCATAAAATTGCTATGGAGTTCGAAGGACATAGGCTGGATTTTTATTGAAGCCTATGGAAAATCTGGAGGTATACTTACGATGTGGGATGAGAGCAAATTATCAGTTGAAGAAACATTAAAAGGTGGCTTCACCCTGACAGTCAAGTGCATATCAATTTGTAGAAAGAGCTGTTGGGTAACAAACATTTATGGCCCTACCGATTACAAGGAGAGGAACAAACTTTGGCTTGAATTAGCTTCCCTCTCTGGCTATTGCTCAGGACCATGGTGCATTAGAGGAGACTTTAATATGACTAGAAGAATACAGGAAAGATATCCAATCGGAAGACTTACAAAAGGAATGAAGAAGTTCAATAAGTTCATTGCCGACTCAAAATTACTAGAAATTCACCTCACAAACGGCAAGTTTACTTGGTCAAGAGAAGGAAGAGCGATCTCTAGATCACTAATAGACTGTTTTTTAGTCTCCAATGATTGGGAGGATTCCTTCGAAAACTCTAGAGTCTCAAGACAAACAAGAGTTTTTTCTGATCATTTTCCAATCCTCTTGGAAGCAGGCTCATTTGAATGGGGTCCTTCTCCCTTTCGTTTTTGCAATAGTTGGCAGTCTGACAAAAGTCGTCGATTAATTGGAAGATCACTCAGTGAATTCAGTGGTCAAGGATGGGTGGGTTTCATGCTAATTACCAGACTGAGAAATCTAAAGCTGATTCTATAG
Coding sequence (CDS)
ATGACTTTGAAGAAAATGCTGCAAACTTTAAACTCGGATTTGGTCCTAATTCAAGAGACAAAAAGGGAATCCTTTGATCCTAACTTCATAAAATTGCTATGGAGTTCGAAGGACATAGGCTGGATTTTTATTGAAGCCTATGGAAAATCTGGAGGTATACTTACGATGTGGGATGAGAGCAAATTATCAGTTGAAGAAACATTAAAAGGTGGCTTCACCCTGACAGTCAAGTGCATATCAATTTGTAGAAAGAGCTGTTGGGTAACAAACATTTATGGCCCTACCGATTACAAGGAGAGGAACAAACTTTGGCTTGAATTAGCTTCCCTCTCTGGCTATTGCTCAGGACCATGGTGCATTAGAGGAGACTTTAATATGACTAGAAGAATACAGGAAAGATATCCAATCGGAAGACTTACAAAAGGAATGAAGAAGTTCAATAAGTTCATTGCCGACTCAAAATTACTAGAAATTCACCTCACAAACGGCAAGTTTACTTGGTCAAGAGAAGGAAGAGCGATCTCTAGATCACTAATAGACTGTTTTTTAGTCTCCAATGATTGGGAGGATTCCTTCGAAAACTCTAGAGTCTCAAGACAAACAAGAGTTTTTTCTGATCATTTTCCAATCCTCTTGGAAGCAGGCTCATTTGAATGGGGTCCTTCTCCCTTTCGTTTTTGCAATAGTTGGCAGTCTGACAAAAGTCGTCGATTAATTGGAAGATCACTCAGTGAATTCAGTGGTCAAGGATGGGTGGGTTTCATGCTAATTACCAGACTGAGAAATCTAAAGCTGATTCTATAG
Protein sequence
MTLKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKLSVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRGDFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCFLVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSWQSDKSRRLIGRSLSEFSGQGWVGFMLITRLRNLKLIL
Homology
BLAST of CmUC03G062690 vs. NCBI nr
Match:
TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])
HSP 1 Score: 285.4 bits (729), Expect = 5.0e-73
Identity = 128/245 (52.24%), Postives = 170/245 (69.39%), Query Frame = 0
Query: 14 LVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKLSVEETLKGGFT 73
LV+ + + D IK LWSSKDIGW +E++G+ GGILTMWD SK+ V ETLKGG++
Sbjct: 71 LVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLKGGYS 130
Query: 74 LTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRGDFNMTRRIQER 133
L++ I+ C+KSCW+TN+YGP DY+ER +WL L SLSGYC+G WCI G N+TR E
Sbjct: 131 LSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHEC 190
Query: 134 YPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCFLVSNDWEDSFE 193
+P+ + T+GM++FN I + E+ L NG+ TWSREG +ISRSL+D F + +W++ E
Sbjct: 191 FPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWDEISE 250
Query: 194 NSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGRSLSEFSGQGWV 253
NSRV R+ SDHFP+LLEAGS +WGPSPFRF NSW + R+I + S W
Sbjct: 251 NSRVGRKAHTISDHFPLLLEAGSIKWGPSPFRFSNSWLPFSECNRIIKEVWNITSITDWA 310
Query: 254 GFMLI 258
GF+LI
Sbjct: 311 GFVLI 315
BLAST of CmUC03G062690 vs. NCBI nr
Match:
XP_038876676.1 (uncharacterized protein LOC120069076 [Benincasa hispida])
HSP 1 Score: 227.6 bits (579), Expect = 1.2e-55
Identity = 103/196 (52.55%), Postives = 141/196 (71.94%), Query Frame = 0
Query: 1 MTLKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDES 60
+ LK+ L+ +N D+VLIQETK++ + +FIK LWSSK++G F+EA GKSGG+LT+WD+S
Sbjct: 18 LLLKRFLKKVNPDIVLIQETKKDRIEGSFIKSLWSSKEVGCAFVEAKGKSGGLLTVWDDS 77
Query: 61 KLSVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCI 120
K+ V K F+L++KC +I +K CW+TN+YGP DY+ER +LW EL+SL+ PWCI
Sbjct: 78 KILVSSISKDEFSLSIKCQTINKKICWITNVYGPCDYQERRRLWAELSSLAEKLDDPWCI 137
Query: 121 RGDFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLID 180
GDFN RR ERYP+G+ T+ M FNKFI + LLEI L+NG+FTWS+EG +S+SL
Sbjct: 138 GGDFNSIRRRHERYPVGKATRDMNNFNKFIRLNNLLEIPLSNGQFTWSKEGDVVSKSL-K 197
Query: 181 CFLVSNDWEDSFENSR 197
FL+ +D E R
Sbjct: 198 MFLIIQGLQDKLEPCR 212
BLAST of CmUC03G062690 vs. NCBI nr
Match:
RVX13544.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 3 LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
+K L++ D+V+ QETK+E D F+ +W++++ W + A G SGGIL +WD KL
Sbjct: 346 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWATLPACGASGGILIIWDTKKL 405
Query: 63 SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
S EE + G F++++K +S W++ +YGP + R LW+EL+ ++G S WC+ G
Sbjct: 406 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 465
Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
DFN+ RR E+ RLT MK F+ FI+D +L+++ L + FTWS +D F
Sbjct: 466 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 525
Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
L SN+WE +F S R SDH+PI+LE F+WGP+PFRF N W Q + GR
Sbjct: 526 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 585
Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
EF G GW G + +L+ +K
Sbjct: 586 WWREFQGNGWEGHKFMRKLQFVK 608
BLAST of CmUC03G062690 vs. NCBI nr
Match:
RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 3 LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
+K L++ D+V+ QETK+E D F+ +W++++ W + A G SGGIL +WD KL
Sbjct: 831 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 890
Query: 63 SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
S EE + G F++++K +S W++ +YGP + R LW+EL+ ++G S WC+ G
Sbjct: 891 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 950
Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
DFN+ RR E+ RLT MK F+ FI+D +L+++ L + FTWS +D F
Sbjct: 951 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1010
Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
L SN+WE +F S R SDH+PI+LE F+WGP+PFRF N W Q + GR
Sbjct: 1011 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1070
Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
EF G GW G + +L+ +K
Sbjct: 1071 WWREFQGNGWEGHKFMRKLQFVK 1093
BLAST of CmUC03G062690 vs. NCBI nr
Match:
CAN68838.1 (hypothetical protein VITISV_030956 [Vitis vinifera])
HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 3 LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
+K L++ D+V+ QETK+E D F+ +W++++ W + A G SGGIL +WD KL
Sbjct: 849 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 908
Query: 63 SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
S EE + G F++++K +S W++ +YGP + R LW+EL+ ++G S WC+ G
Sbjct: 909 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 968
Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
DFN+ RR E+ RLT MK F+ FI+D +L+++ L + FTWS +D F
Sbjct: 969 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1028
Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
L SN+WE +F S R SDH+PI+LE F+WGP+PFRF N W Q + GR
Sbjct: 1029 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1088
Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
EF G GW G + +L+ +K
Sbjct: 1089 WWREFQGNGWEGHKFMRKLQFVK 1111
BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match:
A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)
HSP 1 Score: 285.4 bits (729), Expect = 2.4e-73
Identity = 128/245 (52.24%), Postives = 170/245 (69.39%), Query Frame = 0
Query: 14 LVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKLSVEETLKGGFT 73
LV+ + + D IK LWSSKDIGW +E++G+ GGILTMWD SK+ V ETLKGG++
Sbjct: 71 LVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLKGGYS 130
Query: 74 LTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRGDFNMTRRIQER 133
L++ I+ C+KSCW+TN+YGP DY+ER +WL L SLSGYC+G WCI G N+TR E
Sbjct: 131 LSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHEC 190
Query: 134 YPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCFLVSNDWEDSFE 193
+P+ + T+GM++FN I + E+ L NG+ TWSREG +ISRSL+D F + +W++ E
Sbjct: 191 FPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWDEISE 250
Query: 194 NSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGRSLSEFSGQGWV 253
NSRV R+ SDHFP+LLEAGS +WGPSPFRF NSW + R+I + S W
Sbjct: 251 NSRVGRKAHTISDHFPLLLEAGSIKWGPSPFRFSNSWLPFSECNRIIKEVWNITSITDWA 310
Query: 254 GFMLI 258
GF+LI
Sbjct: 311 GFVLI 315
BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match:
A5CAA2 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030956 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 3 LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
+K L++ D+V+ QETK+E D F+ +W++++ W + A G SGGIL +WD KL
Sbjct: 849 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 908
Query: 63 SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
S EE + G F++++K +S W++ +YGP + R LW+EL+ ++G S WC+ G
Sbjct: 909 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 968
Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
DFN+ RR E+ RLT MK F+ FI+D +L+++ L + FTWS +D F
Sbjct: 969 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1028
Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
L SN+WE +F S R SDH+PI+LE F+WGP+PFRF N W Q + GR
Sbjct: 1029 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1088
Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
EF G GW G + +L+ +K
Sbjct: 1089 WWREFQGNGWEGHKFMRKLQFVK 1111
BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match:
A0A438JX47 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_26 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 3 LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
+K L++ D+V+ QETK+E D F+ +W++++ W + A G SGGIL +WD KL
Sbjct: 346 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWATLPACGASGGILIIWDTKKL 405
Query: 63 SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
S EE + G F++++K +S W++ +YGP + R LW+EL+ ++G S WC+ G
Sbjct: 406 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 465
Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
DFN+ RR E+ RLT MK F+ FI+D +L+++ L + FTWS +D F
Sbjct: 466 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 525
Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
L SN+WE +F S R SDH+PI+LE F+WGP+PFRF N W Q + GR
Sbjct: 526 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 585
Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
EF G GW G + +L+ +K
Sbjct: 586 WWREFQGNGWEGHKFMRKLQFVK 608
BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match:
A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 3 LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
+K L++ D+V+ QETK+E D F+ +W++++ W + A G SGGIL +WD KL
Sbjct: 831 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 890
Query: 63 SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
S EE + G F++++K +S W++ +YGP + R LW+EL+ ++G S WC+ G
Sbjct: 891 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 950
Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
DFN+ RR E+ RLT MK F+ FI+D +L+++ L + FTWS +D F
Sbjct: 951 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1010
Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
L SN+WE +F S R SDH+PI+LE F+WGP+PFRF N W Q + GR
Sbjct: 1011 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1070
Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
EF G GW G + +L+ +K
Sbjct: 1071 WWREFQGNGWEGHKFMRKLQFVK 1093
BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match:
M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 104/267 (38.95%), Postives = 153/267 (57.30%), Query Frame = 0
Query: 1 MTLKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDES 60
+ +K+ L+ L D+V++ ETK+E+ D + +W S+ W+F + G+SGGI +W+
Sbjct: 4 LLVKEQLRRLKPDIVILLETKKETVDRQLVAGVWGSRFKEWVFSPSLGRSGGIAVLWNSQ 63
Query: 61 KLSVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCI 120
+SV +++ G F+++++ + W++ IYGP +ERN W ELA L G+C WC+
Sbjct: 64 SVSVIDSMVGEFSVSIRIVENIGTDWWLSGIYGPCRQRERNSFWEELADLYGFCGDKWCL 123
Query: 121 RGDFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWS--REGRAISRSL 180
GDFN+ R E+ GR+TK M+ FN FI ++ L + +L N FTWS RE R
Sbjct: 124 GGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRR-- 183
Query: 181 IDCFLVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSWQSDKS-RR 240
+D FLVS WED F + R R+ SDH PI L+ +WGPSPFRF N W + R
Sbjct: 184 LDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLNHPDFMR 243
Query: 241 LIGRSLSEFSGQGWVGFMLITRLRNLK 265
I E GW G+ +TRL+ LK
Sbjct: 244 KIKLWWGEDQIPGWEGYKFMTRLKMLK 268
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYJ98683.1 | 5.0e-73 | 52.24 | hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa] | [more] |
XP_038876676.1 | 1.2e-55 | 52.55 | uncharacterized protein LOC120069076 [Benincasa hispida] | [more] |
RVX13544.1 | 4.9e-52 | 39.54 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
RVW70235.1 | 4.9e-52 | 39.54 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
CAN68838.1 | 4.9e-52 | 39.54 | hypothetical protein VITISV_030956 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BHE3 | 2.4e-73 | 52.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A5CAA2 | 2.4e-52 | 39.54 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
A0A438JX47 | 2.4e-52 | 39.54 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... | [more] |
A0A438GDE7 | 2.4e-52 | 39.54 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... | [more] |
M5VS59 | 2.0e-51 | 38.95 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
Match Name | E-value | Identity | Description | |