CmUC03G062690 (gene) Watermelon (USVL531) v1

Overview
NameCmUC03G062690
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationCmU531Chr03: 25593157 .. 25593960 (-)
RNA-Seq ExpressionCmUC03G062690
SyntenyCmUC03G062690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTGAAGAAAATGCTGCAAACTTTAAACTCGGATTTGGTCCTAATTCAAGAGACAAAAAGGGAATCCTTTGATCCTAACTTCATAAAATTGCTATGGAGTTCGAAGGACATAGGCTGGATTTTTATTGAAGCCTATGGAAAATCTGGAGGTATACTTACGATGTGGGATGAGAGCAAATTATCAGTTGAAGAAACATTAAAAGGTGGCTTCACCCTGACAGTCAAGTGCATATCAATTTGTAGAAAGAGCTGTTGGGTAACAAACATTTATGGCCCTACCGATTACAAGGAGAGGAACAAACTTTGGCTTGAATTAGCTTCCCTCTCTGGCTATTGCTCAGGACCATGGTGCATTAGAGGAGACTTTAATATGACTAGAAGAATACAGGAAAGATATCCAATCGGAAGACTTACAAAAGGAATGAAGAAGTTCAATAAGTTCATTGCCGACTCAAAATTACTAGAAATTCACCTCACAAACGGCAAGTTTACTTGGTCAAGAGAAGGAAGAGCGATCTCTAGATCACTAATAGACTGTTTTTTAGTCTCCAATGATTGGGAGGATTCCTTCGAAAACTCTAGAGTCTCAAGACAAACAAGAGTTTTTTCTGATCATTTTCCAATCCTCTTGGAAGCAGGCTCATTTGAATGGGGTCCTTCTCCCTTTCGTTTTTGCAATAGTTGGCAGTCTGACAAAAGTCGTCGATTAATTGGAAGATCACTCAGTGAATTCAGTGGTCAAGGATGGGTGGGTTTCATGCTAATTACCAGACTGAGAAATCTAAAGCTGATTCTATAG

mRNA sequence

ATGACTTTGAAGAAAATGCTGCAAACTTTAAACTCGGATTTGGTCCTAATTCAAGAGACAAAAAGGGAATCCTTTGATCCTAACTTCATAAAATTGCTATGGAGTTCGAAGGACATAGGCTGGATTTTTATTGAAGCCTATGGAAAATCTGGAGGTATACTTACGATGTGGGATGAGAGCAAATTATCAGTTGAAGAAACATTAAAAGGTGGCTTCACCCTGACAGTCAAGTGCATATCAATTTGTAGAAAGAGCTGTTGGGTAACAAACATTTATGGCCCTACCGATTACAAGGAGAGGAACAAACTTTGGCTTGAATTAGCTTCCCTCTCTGGCTATTGCTCAGGACCATGGTGCATTAGAGGAGACTTTAATATGACTAGAAGAATACAGGAAAGATATCCAATCGGAAGACTTACAAAAGGAATGAAGAAGTTCAATAAGTTCATTGCCGACTCAAAATTACTAGAAATTCACCTCACAAACGGCAAGTTTACTTGGTCAAGAGAAGGAAGAGCGATCTCTAGATCACTAATAGACTGTTTTTTAGTCTCCAATGATTGGGAGGATTCCTTCGAAAACTCTAGAGTCTCAAGACAAACAAGAGTTTTTTCTGATCATTTTCCAATCCTCTTGGAAGCAGGCTCATTTGAATGGGGTCCTTCTCCCTTTCGTTTTTGCAATAGTTGGCAGTCTGACAAAAGTCGTCGATTAATTGGAAGATCACTCAGTGAATTCAGTGGTCAAGGATGGGTGGGTTTCATGCTAATTACCAGACTGAGAAATCTAAAGCTGATTCTATAG

Coding sequence (CDS)

ATGACTTTGAAGAAAATGCTGCAAACTTTAAACTCGGATTTGGTCCTAATTCAAGAGACAAAAAGGGAATCCTTTGATCCTAACTTCATAAAATTGCTATGGAGTTCGAAGGACATAGGCTGGATTTTTATTGAAGCCTATGGAAAATCTGGAGGTATACTTACGATGTGGGATGAGAGCAAATTATCAGTTGAAGAAACATTAAAAGGTGGCTTCACCCTGACAGTCAAGTGCATATCAATTTGTAGAAAGAGCTGTTGGGTAACAAACATTTATGGCCCTACCGATTACAAGGAGAGGAACAAACTTTGGCTTGAATTAGCTTCCCTCTCTGGCTATTGCTCAGGACCATGGTGCATTAGAGGAGACTTTAATATGACTAGAAGAATACAGGAAAGATATCCAATCGGAAGACTTACAAAAGGAATGAAGAAGTTCAATAAGTTCATTGCCGACTCAAAATTACTAGAAATTCACCTCACAAACGGCAAGTTTACTTGGTCAAGAGAAGGAAGAGCGATCTCTAGATCACTAATAGACTGTTTTTTAGTCTCCAATGATTGGGAGGATTCCTTCGAAAACTCTAGAGTCTCAAGACAAACAAGAGTTTTTTCTGATCATTTTCCAATCCTCTTGGAAGCAGGCTCATTTGAATGGGGTCCTTCTCCCTTTCGTTTTTGCAATAGTTGGCAGTCTGACAAAAGTCGTCGATTAATTGGAAGATCACTCAGTGAATTCAGTGGTCAAGGATGGGTGGGTTTCATGCTAATTACCAGACTGAGAAATCTAAAGCTGATTCTATAG

Protein sequence

MTLKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKLSVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRGDFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCFLVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSWQSDKSRRLIGRSLSEFSGQGWVGFMLITRLRNLKLIL
Homology
BLAST of CmUC03G062690 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 285.4 bits (729), Expect = 5.0e-73
Identity = 128/245 (52.24%), Postives = 170/245 (69.39%), Query Frame = 0

Query: 14  LVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKLSVEETLKGGFT 73
           LV+    + +  D   IK LWSSKDIGW  +E++G+ GGILTMWD SK+ V ETLKGG++
Sbjct: 71  LVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLKGGYS 130

Query: 74  LTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRGDFNMTRRIQER 133
           L++  I+ C+KSCW+TN+YGP DY+ER  +WL L SLSGYC+G WCI G  N+TR   E 
Sbjct: 131 LSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHEC 190

Query: 134 YPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCFLVSNDWEDSFE 193
           +P+ + T+GM++FN  I    + E+ L NG+ TWSREG +ISRSL+D F +  +W++  E
Sbjct: 191 FPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWDEISE 250

Query: 194 NSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGRSLSEFSGQGWV 253
           NSRV R+    SDHFP+LLEAGS +WGPSPFRF NSW    +  R+I    +  S   W 
Sbjct: 251 NSRVGRKAHTISDHFPLLLEAGSIKWGPSPFRFSNSWLPFSECNRIIKEVWNITSITDWA 310

Query: 254 GFMLI 258
           GF+LI
Sbjct: 311 GFVLI 315

BLAST of CmUC03G062690 vs. NCBI nr
Match: XP_038876676.1 (uncharacterized protein LOC120069076 [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-55
Identity = 103/196 (52.55%), Postives = 141/196 (71.94%), Query Frame = 0

Query: 1   MTLKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDES 60
           + LK+ L+ +N D+VLIQETK++  + +FIK LWSSK++G  F+EA GKSGG+LT+WD+S
Sbjct: 18  LLLKRFLKKVNPDIVLIQETKKDRIEGSFIKSLWSSKEVGCAFVEAKGKSGGLLTVWDDS 77

Query: 61  KLSVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCI 120
           K+ V    K  F+L++KC +I +K CW+TN+YGP DY+ER +LW EL+SL+     PWCI
Sbjct: 78  KILVSSISKDEFSLSIKCQTINKKICWITNVYGPCDYQERRRLWAELSSLAEKLDDPWCI 137

Query: 121 RGDFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLID 180
            GDFN  RR  ERYP+G+ T+ M  FNKFI  + LLEI L+NG+FTWS+EG  +S+SL  
Sbjct: 138 GGDFNSIRRRHERYPVGKATRDMNNFNKFIRLNNLLEIPLSNGQFTWSKEGDVVSKSL-K 197

Query: 181 CFLVSNDWEDSFENSR 197
            FL+    +D  E  R
Sbjct: 198 MFLIIQGLQDKLEPCR 212

BLAST of CmUC03G062690 vs. NCBI nr
Match: RVX13544.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0

Query: 3   LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
           +K  L++   D+V+ QETK+E  D  F+  +W++++  W  + A G SGGIL +WD  KL
Sbjct: 346 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWATLPACGASGGILIIWDTKKL 405

Query: 63  SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
           S EE + G F++++K      +S W++ +YGP +   R  LW+EL+ ++G  S  WC+ G
Sbjct: 406 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 465

Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
           DFN+ RR  E+    RLT  MK F+ FI+D +L+++ L +  FTWS          +D F
Sbjct: 466 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 525

Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
           L SN+WE +F  S      R  SDH+PI+LE   F+WGP+PFRF N W Q    +   GR
Sbjct: 526 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 585

Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
              EF G GW G   + +L+ +K
Sbjct: 586 WWREFQGNGWEGHKFMRKLQFVK 608

BLAST of CmUC03G062690 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0

Query: 3    LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
            +K  L++   D+V+ QETK+E  D  F+  +W++++  W  + A G SGGIL +WD  KL
Sbjct: 831  VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 890

Query: 63   SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
            S EE + G F++++K      +S W++ +YGP +   R  LW+EL+ ++G  S  WC+ G
Sbjct: 891  SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 950

Query: 123  DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
            DFN+ RR  E+    RLT  MK F+ FI+D +L+++ L +  FTWS          +D F
Sbjct: 951  DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1010

Query: 183  LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
            L SN+WE +F  S      R  SDH+PI+LE   F+WGP+PFRF N W Q    +   GR
Sbjct: 1011 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1070

Query: 243  SLSEFSGQGWVGFMLITRLRNLK 265
               EF G GW G   + +L+ +K
Sbjct: 1071 WWREFQGNGWEGHKFMRKLQFVK 1093

BLAST of CmUC03G062690 vs. NCBI nr
Match: CAN68838.1 (hypothetical protein VITISV_030956 [Vitis vinifera])

HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0

Query: 3    LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
            +K  L++   D+V+ QETK+E  D  F+  +W++++  W  + A G SGGIL +WD  KL
Sbjct: 849  VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 908

Query: 63   SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
            S EE + G F++++K      +S W++ +YGP +   R  LW+EL+ ++G  S  WC+ G
Sbjct: 909  SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 968

Query: 123  DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
            DFN+ RR  E+    RLT  MK F+ FI+D +L+++ L +  FTWS          +D F
Sbjct: 969  DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1028

Query: 183  LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
            L SN+WE +F  S      R  SDH+PI+LE   F+WGP+PFRF N W Q    +   GR
Sbjct: 1029 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1088

Query: 243  SLSEFSGQGWVGFMLITRLRNLK 265
               EF G GW G   + +L+ +K
Sbjct: 1089 WWREFQGNGWEGHKFMRKLQFVK 1111

BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 2.4e-73
Identity = 128/245 (52.24%), Postives = 170/245 (69.39%), Query Frame = 0

Query: 14  LVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKLSVEETLKGGFT 73
           LV+    + +  D   IK LWSSKDIGW  +E++G+ GGILTMWD SK+ V ETLKGG++
Sbjct: 71  LVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLKGGYS 130

Query: 74  LTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRGDFNMTRRIQER 133
           L++  I+ C+KSCW+TN+YGP DY+ER  +WL L SLSGYC+G WCI G  N+TR   E 
Sbjct: 131 LSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHEC 190

Query: 134 YPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCFLVSNDWEDSFE 193
           +P+ + T+GM++FN  I    + E+ L NG+ TWSREG +ISRSL+D F +  +W++  E
Sbjct: 191 FPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWDEISE 250

Query: 194 NSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGRSLSEFSGQGWV 253
           NSRV R+    SDHFP+LLEAGS +WGPSPFRF NSW    +  R+I    +  S   W 
Sbjct: 251 NSRVGRKAHTISDHFPLLLEAGSIKWGPSPFRFSNSWLPFSECNRIIKEVWNITSITDWA 310

Query: 254 GFMLI 258
           GF+LI
Sbjct: 311 GFVLI 315

BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match: A5CAA2 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030956 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0

Query: 3    LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
            +K  L++   D+V+ QETK+E  D  F+  +W++++  W  + A G SGGIL +WD  KL
Sbjct: 849  VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 908

Query: 63   SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
            S EE + G F++++K      +S W++ +YGP +   R  LW+EL+ ++G  S  WC+ G
Sbjct: 909  SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 968

Query: 123  DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
            DFN+ RR  E+    RLT  MK F+ FI+D +L+++ L +  FTWS          +D F
Sbjct: 969  DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1028

Query: 183  LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
            L SN+WE +F  S      R  SDH+PI+LE   F+WGP+PFRF N W Q    +   GR
Sbjct: 1029 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1088

Query: 243  SLSEFSGQGWVGFMLITRLRNLK 265
               EF G GW G   + +L+ +K
Sbjct: 1089 WWREFQGNGWEGHKFMRKLQFVK 1111

BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match: A0A438JX47 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_26 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0

Query: 3   LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
           +K  L++   D+V+ QETK+E  D  F+  +W++++  W  + A G SGGIL +WD  KL
Sbjct: 346 VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWATLPACGASGGILIIWDTKKL 405

Query: 63  SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
           S EE + G F++++K      +S W++ +YGP +   R  LW+EL+ ++G  S  WC+ G
Sbjct: 406 SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 465

Query: 123 DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
           DFN+ RR  E+    RLT  MK F+ FI+D +L+++ L +  FTWS          +D F
Sbjct: 466 DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 525

Query: 183 LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
           L SN+WE +F  S      R  SDH+PI+LE   F+WGP+PFRF N W Q    +   GR
Sbjct: 526 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 585

Query: 243 SLSEFSGQGWVGFMLITRLRNLK 265
              EF G GW G   + +L+ +K
Sbjct: 586 WWREFQGNGWEGHKFMRKLQFVK 608

BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 0

Query: 3    LKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDESKL 62
            +K  L++   D+V+ QETK+E  D  F+  +W++++  W  + A G SGGIL +WD  KL
Sbjct: 831  VKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKL 890

Query: 63   SVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCIRG 122
            S EE + G F++++K      +S W++ +YGP +   R  LW+EL+ ++G  S  WC+ G
Sbjct: 891  SREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGG 950

Query: 123  DFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWSREGRAISRSLIDCF 182
            DFN+ RR  E+    RLT  MK F+ FI+D +L+++ L +  FTWS          +D F
Sbjct: 951  DFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRF 1010

Query: 183  LVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSW-QSDKSRRLIGR 242
            L SN+WE +F  S      R  SDH+PI+LE   F+WGP+PFRF N W Q    +   GR
Sbjct: 1011 LYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGR 1070

Query: 243  SLSEFSGQGWVGFMLITRLRNLK 265
               EF G GW G   + +L+ +K
Sbjct: 1071 WWREFQGNGWEGHKFMRKLQFVK 1093

BLAST of CmUC03G062690 vs. ExPASy TrEMBL
Match: M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 104/267 (38.95%), Postives = 153/267 (57.30%), Query Frame = 0

Query: 1   MTLKKMLQTLNSDLVLIQETKRESFDPNFIKLLWSSKDIGWIFIEAYGKSGGILTMWDES 60
           + +K+ L+ L  D+V++ ETK+E+ D   +  +W S+   W+F  + G+SGGI  +W+  
Sbjct: 4   LLVKEQLRRLKPDIVILLETKKETVDRQLVAGVWGSRFKEWVFSPSLGRSGGIAVLWNSQ 63

Query: 61  KLSVEETLKGGFTLTVKCISICRKSCWVTNIYGPTDYKERNKLWLELASLSGYCSGPWCI 120
            +SV +++ G F+++++ +       W++ IYGP   +ERN  W ELA L G+C   WC+
Sbjct: 64  SVSVIDSMVGEFSVSIRIVENIGTDWWLSGIYGPCRQRERNSFWEELADLYGFCGDKWCL 123

Query: 121 RGDFNMTRRIQERYPIGRLTKGMKKFNKFIADSKLLEIHLTNGKFTWS--REGRAISRSL 180
            GDFN+ R   E+   GR+TK M+ FN FI ++ L + +L N  FTWS  RE     R  
Sbjct: 124 GGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRR-- 183

Query: 181 IDCFLVSNDWEDSFENSRVSRQTRVFSDHFPILLEAGSFEWGPSPFRFCNSWQSDKS-RR 240
           +D FLVS  WED F + R     R+ SDH PI L+    +WGPSPFRF N W +     R
Sbjct: 184 LDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLNHPDFMR 243

Query: 241 LIGRSLSEFSGQGWVGFMLITRLRNLK 265
            I     E    GW G+  +TRL+ LK
Sbjct: 244 KIKLWWGEDQIPGWEGYKFMTRLKMLK 268

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYJ98683.15.0e-7352.24hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa][more]
XP_038876676.11.2e-5552.55uncharacterized protein LOC120069076 [Benincasa hispida][more]
RVX13544.14.9e-5239.54LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
RVW70235.14.9e-5239.54LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
CAN68838.14.9e-5239.54hypothetical protein VITISV_030956 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BHE32.4e-7352.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A5CAA22.4e-5239.54Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... [more]
A0A438JX472.4e-5239.54LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... [more]
A0A438GDE72.4e-5239.54LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... [more]
M5VS592.0e-5138.95Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..213
e-value: 2.1E-29
score: 105.0
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 3..213
NoneNo IPR availablePANTHERPTHR33710:SF32SUBFAMILY NOT NAMEDcoord: 72..264
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 72..264

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC03G062690.1CmUC03G062690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050789 regulation of biological process