CmUC03G061580 (gene) Watermelon (USVL531) v1

Overview
NameCmUC03G061580
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
LocationCmU531Chr03: 23156073 .. 23157649 (-)
RNA-Seq ExpressionCmUC03G061580
SyntenyCmUC03G061580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGTACTTCTACCGCATCAAAAAGGTACCTTCGAGCTCAGCTTTGTCATCTAGCTCGGGCTGTTCAAAAAGAAAAAGAGGTTCCAACTAAGAAGAACCGACCACCAGATCCGCTGGTCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCCAAAGTACTCCAAAGACCCAAATATAGTCAATCAAGAAGGTGGTCAGATTGAAGCGGAGTTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGATCCGAACCACTACTAGACTAGACTAGTCGTTGAGTGACGTAGTGGTTTTTTCTATTAGTTGCGATGCGAACAGGCGTTTACTTATGAGATTTGTTGAGTAGGCTTGCGTTAGTTGTCTGCTATAAAATAGCTAGTTTTGGGGCTTTCGACATAAAAAAGCCGATCGGCTTGGCTTCGCTATCGCTCATGACTTGTATTGTAGTCCTAGTCTTGTAGTCGGCCTGGAATGCCTTTGTAGTCTTTCTAATGCTAATGCCTTCTTCCTTCATTCATTTTCTTTTAGTTGCGGTAGCTCCCGCGCCAGCAAGATACAGACGGCGAAGCCAAAGCAATACTAAACGAGCAGCCGCCCTAACGAGACTCTTAGTCAAGCCTAAACGTCCTTATTGAAAACTAAAGCGCTAACAAGCAAGAAAAGGCCCCTTCCTATATCGAGAGATAGGCTAAGGCGCCTTTACTAATATTCTAATAGTTGGCCCCTCTTTCCTTTTTTGTTATTGAAAACGGGGCAACTTTCTCGCTTGTTGCTTTAGAAAGATGGCAGGGGCGCGTTAGCGCCCTTCCTTCAGCTGCCCCCGCCCTATCTCGGCCCGGAAGTTCGCTTTCGGCGACTAGCTTCTACCGCTAGCGCTTGGACTTGGAAGCAAGCTACAGCTACCTTGAATCAATCAATGAATGAAAAGAAAGAATTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGACCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGCGAGAGTGTCACGTACGGTTCCTTTGAGAAGGGTGTGATACCACCACCTATCAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTGTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTCTGGTGTTTCAGTCACCTTTCAATGGCTCCCTTAA

mRNA sequence

ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTGTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTCTGGTGTTTCAGTCACCTTTCAATGGCTCCCTTAA

Coding sequence (CDS)

ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTGTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTCTGGTGTTTCAGTCACCTTTCAATGGCTCCCTTAA

Protein sequence

MAVIQYEKASTHSSENIEMHVIIKVLIPESDWGDNSFKALTYIPRKTFPATEEKIARPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP
Homology
[Close]
BLAST of CmUC03G061580 vs. NCBI nr
Match: KAG5138866.1 (hypothetical protein JHK84_032634 [Glycine max])

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFK+IPGSIWFSIKVILFLFLYIWVRAA
Sbjct: 174 RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKRIPGSIWFSIKVILFLFLYIWVRAA 233

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTF WLP
Sbjct: 234 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFPWLP 272

[Close]
BLAST of CmUC03G061580 vs. NCBI nr
Match: KAF4349940.1 (hypothetical protein G4B88_002362 [Cannabis sativa])

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-48
Identity = 97/99 (97.98%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCTSLSPGGWPPILD PIFKKIPGSIWFSIKVILFLFLYIWVRAA
Sbjct: 50  RPDERSTELHPYSPGPCTSLSPGGWPPILDRPIFKKIPGSIWFSIKVILFLFLYIWVRAA 109

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVV VSGVSVTFQWLP
Sbjct: 110 FPRYRYDQLMGLGRKVFLPLSLARVVPVSGVSVTFQWLP 148

[Close]
BLAST of CmUC03G061580 vs. NCBI nr
Match: KAA0047140.1 (hypothetical protein E6C27_scaffold49037G00040 [Cucumis melo var. makuwa] >TYJ98795.1 hypothetical protein E5676_scaffold78538G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-48
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 58  PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF 117
           PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF
Sbjct: 35  PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF 94

Query: 118 PRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           PRYRYDQLMGLGRKVFLPLSLARVV VSG+SVTFQWLP
Sbjct: 95  PRYRYDQLMGLGRKVFLPLSLARVVLVSGLSVTFQWLP 132

[Close]
BLAST of CmUC03G061580 vs. NCBI nr
Match: KAF3971990.1 (hypothetical protein CMV_004456 [Castanea mollissima])

HSP 1 Score: 198.7 bits (504), Expect = 3.6e-47
Identity = 95/99 (95.96%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA
Sbjct: 15  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 74

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRY YDQLMGLGRKVFLPLSLARVV VSGV V FQWLP
Sbjct: 75  FPRYHYDQLMGLGRKVFLPLSLARVVPVSGVLVIFQWLP 113

[Close]
BLAST of CmUC03G061580 vs. NCBI nr
Match: KAF3452233.1 (hypothetical protein FNV43_RR08331 [Rhamnella rubrinervis])

HSP 1 Score: 198.0 bits (502), Expect = 6.1e-47
Identity = 96/98 (97.96%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 58  PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF 117
           PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSI FSIKVILFLFLYIWVRAAF
Sbjct: 453 PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIRFSIKVILFLFLYIWVRAAF 512

Query: 118 PRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           PRYRYDQLMGLGRKVFLPLSLARVV VSGVSVTFQWLP
Sbjct: 513 PRYRYDQLMGLGRKVFLPLSLARVVPVSGVSVTFQWLP 550

[Close]
BLAST of CmUC03G061580 vs. ExPASy Swiss-Prot
Match: Q01300 (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-40
Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CTSLSPGGWPPILDLPI KKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GLCTSLSPGGWPPILDLPISKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSGV VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGVLVTFQWLP 325

[Close]
BLAST of CmUC03G061580 vs. ExPASy Swiss-Prot
Match: Q01148 (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-35
Identity = 75/85 (88.24%), Postives = 77/85 (90.59%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CT L  GGW PILDLPI KKIP SIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GLCTLLFLGGWLPILDLPISKKIPCSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSGVSVTF+WLP
Sbjct: 301 KVFLPLSLARVVPVSGVSVTFRWLP 325

[Close]
BLAST of CmUC03G061580 vs. ExPASy Swiss-Prot
Match: P31839 (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-35
Identity = 75/85 (88.24%), Postives = 76/85 (89.41%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CT L  GGW PILDLPIFKKIPGSIWFSIKVI FLFLYIWVRAAFPRYRYDQLMGLG 
Sbjct: 247 GLCTLLFLGGWLPILDLPIFKKIPGSIWFSIKVIFFLFLYIWVRAAFPRYRYDQLMGLGW 306

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLA VV+VSGV VTFQWLP
Sbjct: 307 KVFLPLSLAWVVSVSGVLVTFQWLP 331

[Close]
BLAST of CmUC03G061580 vs. ExPASy Swiss-Prot
Match: P92558 (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE=1 SV=4)

HSP 1 Score: 146.4 bits (368), Expect = 2.8e-34
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CT    GGW PILDLPIFKKIPGSIWFSIKV+ FLFLYIWVRAAFPRYRYDQLMGLG 
Sbjct: 241 GLCTLFFLGGWLPILDLPIFKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGW 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLA VV+VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLAWVVSVSGLLVTFQWLP 325

[Close]
BLAST of CmUC03G061580 vs. ExPASy Swiss-Prot
Match: P26845 (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 8.3e-31
Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 73  CTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKV 132
           CT L  GGW PILD+PIF+ IPGSIWFSIKV+ FLF+YIWVRAAFPRYRYDQLM LG KV
Sbjct: 246 CTLLFLGGWLPILDIPIFQVIPGSIWFSIKVLFFLFVYIWVRAAFPRYRYDQLMRLGWKV 305

Query: 133 FLPLSLARVVAVSGVSVTFQWLP 156
           FLPLSLA VV VSGV V F+WLP
Sbjct: 306 FLPLSLAWVVFVSGVLVAFEWLP 328

[Close]
BLAST of CmUC03G061580 vs. ExPASy TrEMBL
Match: A0A7J6DW83 (NADH-ubiquinone oxidoreductase chain 1 OS=Cannabis sativa OX=3483 GN=G4B88_002362 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.2e-49
Identity = 97/99 (97.98%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCTSLSPGGWPPILD PIFKKIPGSIWFSIKVILFLFLYIWVRAA
Sbjct: 50  RPDERSTELHPYSPGPCTSLSPGGWPPILDRPIFKKIPGSIWFSIKVILFLFLYIWVRAA 109

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVV VSGVSVTFQWLP
Sbjct: 110 FPRYRYDQLMGLGRKVFLPLSLARVVPVSGVSVTFQWLP 148

[Close]
BLAST of CmUC03G061580 vs. ExPASy TrEMBL
Match: A0A5A7TVE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78538G00010 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 58  PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF 117
           PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF
Sbjct: 35  PDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAF 94

Query: 118 PRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           PRYRYDQLMGLGRKVFLPLSLARVV VSG+SVTFQWLP
Sbjct: 95  PRYRYDQLMGLGRKVFLPLSLARVVLVSGLSVTFQWLP 132

[Close]
BLAST of CmUC03G061580 vs. ExPASy TrEMBL
Match: A0A3P6E0Y8 (Uncharacterized protein (Fragment) OS=Brassica campestris OX=3711 GN=BRASC48T46282Z PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAA
Sbjct: 1   RPDERSTELHPYSPGPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAA 60

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 61  FPRYRYDQLMGLGRKVFLPLSLARVVPVSGLLVTFQWLP 99

[Close]
BLAST of CmUC03G061580 vs. ExPASy TrEMBL
Match: A0A3P6H4Y9 (Uncharacterized protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLSC28T60328H PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAA
Sbjct: 1   RPDERSTELHPYSPGPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAA 60

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 61  FPRYRYDQLMGLGRKVFLPLSLARVVPVSGLLVTFQWLP 99

[Close]
BLAST of CmUC03G061580 vs. ExPASy TrEMBL
Match: A0A1C9I9N2 (NADH-ubiquinone oxidoreductase chain 1 OS=Corchorus capsularis OX=210143 GN=nad1 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 0 

Query: 47  TFPATEEKIARPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF 106
           + P  +  I    +++TELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF
Sbjct: 179 SLPTEKYSILEKPKKATELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF 238

Query: 107 LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV VSGV VTFQWLP
Sbjct: 239 LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVPVSGVLVTFQWLP 287

[Close]
BLAST of CmUC03G061580 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 164.9 bits (416), Expect = 5.3e-41
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGLLVTFQWLP 325

[Close]
BLAST of CmUC03G061580 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 164.9 bits (416), Expect = 5.3e-41
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGLLVTFQWLP 325

[Close]
BLAST of CmUC03G061580 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 164.9 bits (416), Expect = 5.3e-41
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGLLVTFQWLP 325

The following BLAST results are available for this feature:
BLAST of CmUC03G061580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5138866.11.1e-4897.98hypothetical protein JHK84_032634 [Glycine max][more]
KAF4349940.11.9e-4897.98hypothetical protein G4B88_002362 [Cannabis sativa][more]
KAA0047140.13.2e-4897.96hypothetical protein E6C27_scaffold49037G00040 [Cucumis melo var. makuwa] >TYJ98... [more]
KAF3971990.13.6e-4795.96hypothetical protein CMV_004456 [Castanea mollissima][more]
KAF3452233.16.1e-4797.96hypothetical protein FNV43_RR08331 [Rhamnella rubrinervis][more]
BLAST of CmUC03G061580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q013003.4e-4095.29NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV... [more]
Q011481.9e-3588.24NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 ... [more]
P318392.5e-3588.24NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE... [more]
P925582.8e-3484.71NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE... [more]
P268458.3e-3179.52NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 P... [more]
BLAST of CmUC03G061580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J6DW839.2e-4997.98NADH-ubiquinone oxidoreductase chain 1 OS=Cannabis sativa OX=3483 GN=G4B88_00236... [more]
A0A5A7TVE91.6e-4897.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A3P6E0Y82.5e-4692.93Uncharacterized protein (Fragment) OS=Brassica campestris OX=3711 GN=BRASC48T462... [more]
A0A3P6H4Y92.5e-4692.93Uncharacterized protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLSC28T60328... [more]
A0A1C9I9N22.5e-4685.32NADH-ubiquinone oxidoreductase chain 1 OS=Corchorus capsularis OX=210143 GN=nad1... [more]
BLAST of CmUC03G061580 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG01120.15.3e-4191.76NADH dehydrogenase 1B [more]
ATMG00516.15.3e-4191.76NADH dehydrogenase 1C [more]
ATMG01275.15.3e-4191.76NADH dehydrogenase 1A [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPFAMPF00146NADHdhcoord: 78..144
e-value: 1.4E-16
score: 60.7
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPANTHERPTHR11432NADH DEHYDROGENASE SUBUNIT 1coord: 86..147
NoneNo IPR availablePANTHERPTHR11432:SF3NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1coord: 86..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC03G061580.1CmUC03G061580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0006397 mRNA processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity