CmUC03G060040 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G060040
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	CCHC-type domain-containing protein
Location	CmU531Chr03: 18125317 .. 18125937 (-)
RNA-Seq Expression	CmUC03G060040
Synteny	CmUC03G060040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAGAATGCTATTGCAAACATTCATCTAGCATTGGCACATAATGTATTATCAAGTATAGAAGAGAAGAAAATTGCAAAGGAGATTTGGGATCAGCTCACCAAATTGTATGAGGCCAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTATACTCTTCAGATGTCAAGAGTCCATATCAATGACGGAGCACATAAACACAATGAGTACTCTATTTTTTCTCAACTCACATCGTTGGGTCATAAAATACAGCCAAATGTATGTGTTGAACTTCTTCTTCAAAGTCTTCCTCATTCGTATGATCAACTTCTCATCAATCTGACAAATAATGTTCTCACTGACTATCTAAACATTGATGATATTGTACCTGCTGTCTTAAAAGACAAAAATTGGCGCAAGAACAAAAAAGATAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGACATTGACAGTGCCAAGAGGCAGGTTAGCGGAGCGTAGCTCAAGTGGGAGTCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAGTGCTACAACTGTAGAAAGAAGATGTCTCTACCCTTTTGTGAGCATTTTGTTACTTTTAAGCAGCGCAAATTAA

mRNA sequence

ATGGACGAGAATGCTATTGCAAACATTCATCTAGCATTGGCACATAATGTATTATCAAGTATAGAAGAGAAGAAAATTGCAAAGGAGATTTGGGATCAGCTCACCAAATTGTATGAGGCCAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTATACTCTTCAGATGTCAAGAGTCCATATCAATGACGGAGCACATAAACACAATGAGTACTCTATTTTTTCTCAACTCACATCGTTGGGTCATAAAATACAGCCAAATGTATGTGTTGAACTTCTTCTTCAAAGTCTTCCTCATTCGTATGATCAACTTCTCATCAATCTGACAAATAATGTTCTCACTGACTATCTAAACATTGATGATATTGTACCTGCTGTCTTAAAAGACAAAAATTGGCGCAAGAACAAAAAAGATAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGACATTGACAGTGCCAAGAGGCAGGTTAGCGGAGCGTAGCTCAAGTGGGAGTCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAGTGCTACAACTGTAGAAAGAAGATGTCTCTACCCTTTTGTGAGCATTTTGTTACTTTTAAGCAGCGCAAATTAA

Coding sequence (CDS)

ATGGACGAGAATGCTATTGCAAACATTCATCTAGCATTGGCACATAATGTATTATCAAGTATAGAAGAGAAGAAAATTGCAAAGGAGATTTGGGATCAGCTCACCAAATTGTATGAGGCCAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTATACTCTTCAGATGTCAAGAGTCCATATCAATGACGGAGCACATAAACACAATGAGTACTCTATTTTTTCTCAACTCACATCGTTGGGTCATAAAATACAGCCAAATGTATGTGTTGAACTTCTTCTTCAAAGTCTTCCTCATTCGTATGATCAACTTCTCATCAATCTGACAAATAATGTTCTCACTGACTATCTAAACATTGATGATATTGTACCTGCTGTCTTAAAAGACAAAAATTGGCGCAAGAACAAAAAAGATAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGACATTGACAGTGCCAAGAGGCAGGTTAGCGGAGCGTAGCTCAAGTGGGAGTCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAGTGCTACAACTGTAGAAAGAAGATGTCTCTACCCTTTTGTGAGCATTTTGTTACTTTTAAGCAGCGCAAATTAA

Protein sequence

MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSRVHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLNIDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKKNMSATTVERRCLYPFVSILLLLSSAN

Homology

[Close]

BLAST of CmUC03G060040 vs. NCBI nr
Match: TYK16527.1 (hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa])

HSP 1 Score: 229.2 bits (583), Expect = 3.3e-56
Identity = 130/182 (71.43%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD NA+ANIHLALA NVLSSIEEKKIAKEIWD L KLYEAKSLHNKIFLKRKLYTL+MS 
Sbjct: 51  MDGNAMANIHLALADNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSG 110

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
             +    H +   ++FSQLT LG+KI+PN C ELLLQSLP SYDQL+INLTNN+LTDYL+
Sbjct: 111 STLMT-EHMNTLNTLFSQLTLLGYKIEPNKCAELLLQSLPDSYDQLVINLTNNILTDYLS 170

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
            DD+V  VL+++N  KNK+DKLVSSQQA+ LT+T  R R  E +SSGS+NQGRSKS+SKK
Sbjct: 171 FDDVVATVLEEENRCKNKEDKLVSSQQAEVLTVT--RVRPLECNSSGSKNQGRSKSQSKK 229

Query: 181 NM 183
           NM
Sbjct: 231 NM 229

[Close]

BLAST of CmUC03G060040 vs. NCBI nr
Match: KAA0061179.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa])

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-53
Identity = 128/188 (68.09%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD NA ANIHLALA NVLSSIEEKK AKEIWD LTKLY+AKSLHNKIFLKRKLYTL+MS 
Sbjct: 51  MDGNATANIHLALADNVLSSIEEKKTAKEIWDHLTKLYKAKSLHNKIFLKRKLYTLRMSE 110

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
              +   H +   ++FSQLT L +KI+PN   ELLLQSLP SYDQL+INLTNN+LTDYL+
Sbjct: 111 -STSMTEHMNILNTLFSQLTLLAYKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLS 170

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
            DD+  AVL+++N RKNK+DKLVSSQQA+AL +T  RGR +E +SSGS+NQGRSKSR  +
Sbjct: 171 FDDVTSAVLEEENRRKNKEDKLVSSQQAEALVVT--RGRSSECNSSGSKNQGRSKSR--R 230

Query: 181 NMSATTVE 189
           N+++T  E
Sbjct: 231 NVASTINE 233

[Close]

BLAST of CmUC03G060040 vs. NCBI nr
Match: KAA0044949.1 (hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa])

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-53
Identity = 127/182 (69.78%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD NA+ANIHLAL  NVLSSIEEKKIAKEIWD L KLYEAKSLHNKIFLKRKLYTL+MS 
Sbjct: 51  MDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSG 110

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
             +    H +   ++FSQLT LG+KI+PN   ELLLQSLP SYDQL+INLTNN+LTDYL+
Sbjct: 111 STLMT-EHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLS 170

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
            DD+   VL+++N  KNK+DKLVSSQQA+ALT+T  R R  E +SSGS+NQGRSKS+SKK
Sbjct: 171 FDDVAATVLEEENRCKNKEDKLVSSQQAEALTVT--RVRPLECNSSGSKNQGRSKSQSKK 229

Query: 181 NM 183
            M
Sbjct: 231 KM 229

[Close]

BLAST of CmUC03G060040 vs. NCBI nr
Match: KAF2314531.1 (hypothetical protein GH714_027382 [Hevea brasiliensis])

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-48
Identity = 117/182 (64.29%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD+NAIAN+HLA+A  VLSS+ EKK AKEIWD LT LYEAKSLHNKIFLKR+LYTL+MS 
Sbjct: 109 MDDNAIANLHLAMADTVLSSVAEKKTAKEIWDTLTGLYEAKSLHNKIFLKRRLYTLRMSE 168

Query: 61  -VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYL 120
              + D  H +N  ++FSQLT+L + I  N   ELLLQSLP SYDQL+INLTNN+LTDYL
Sbjct: 169 STSVTD--HINNLNTLFSQLTALEYHIAENERAELLLQSLPDSYDQLIINLTNNILTDYL 228

Query: 121 NIDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSK 180
             +D+  AVL++++ RKNK+DKL +SQQ +AL +   RGR  E  SSGSQN  RSKSRSK
Sbjct: 229 VFNDVAAAVLEEESRRKNKEDKLFTSQQTEALLMM--RGRSMEHGSSGSQNHSRSKSRSK 286

Query: 181 KN 182
           KN
Sbjct: 289 KN 286

[Close]

BLAST of CmUC03G060040 vs. NCBI nr
Match: KAF2291279.1 (hypothetical protein GH714_022155 [Hevea brasiliensis] >KAF2291288.1 hypothetical protein GH714_022225 [Hevea brasiliensis])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-47
Identity = 115/182 (63.19%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD+NAIA++HLA+A  VLSS+ EKK AKEIWD LT LYEAKSLHNKIFLKR+LYT +MS 
Sbjct: 87  MDDNAIAHLHLAMADTVLSSVAEKKTAKEIWDTLTGLYEAKSLHNKIFLKRRLYTFRMSE 146

Query: 61  -VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYL 120
              + D  H +N  ++FSQLT+L + I  N   ELLLQSLP SYDQL+INLTNN+LTDYL
Sbjct: 147 STSVTD--HINNLNTLFSQLTALEYHIAENERTELLLQSLPDSYDQLIINLTNNILTDYL 206

Query: 121 NIDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSK 180
             +D+  AVL++++ RKNK+DKL +SQQ +AL +   RGR   R SSGSQN  RSKSRSK
Sbjct: 207 VFNDVAAAVLEEESRRKNKEDKLFTSQQTEALLMM--RGRSMARGSSGSQNHSRSKSRSK 264

Query: 181 KN 182
           KN
Sbjct: 267 KN 264

[Close]

BLAST of CmUC03G060040 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-15
Identity = 67/191 (35.08%), Postives = 107/191 (56.02%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           +DE A + I L L+ +V+++I ++  A+ IW +L  LY +K+L NK++LK++LY L MS 
Sbjct: 55  LDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSE 114

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
              N  +H +    + +QL +LG KI+      LLL SLP SYD L   + +   T  + 
Sbjct: 115 -GTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT--IE 174

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
           + D+  A+L ++  RK  ++      Q +AL +T  RGR  +RSS+   N GRS +R K 
Sbjct: 175 LKDVTSALLLNEKMRKKPEN------QGQAL-ITEGRGRSYQRSSN---NYGRSGARGKS 232

Query: 181 NMSATTVERRC 192
              + +  R C
Sbjct: 235 KNRSKSRVRNC 232

[Close]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL
Match: A0A5D3CXA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003420 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.6e-56
Identity = 130/182 (71.43%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD NA+ANIHLALA NVLSSIEEKKIAKEIWD L KLYEAKSLHNKIFLKRKLYTL+MS 
Sbjct: 51  MDGNAMANIHLALADNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSG 110

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
             +    H +   ++FSQLT LG+KI+PN C ELLLQSLP SYDQL+INLTNN+LTDYL+
Sbjct: 111 STLMT-EHMNTLNTLFSQLTLLGYKIEPNKCAELLLQSLPDSYDQLVINLTNNILTDYLS 170

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
            DD+V  VL+++N  KNK+DKLVSSQQA+ LT+T  R R  E +SSGS+NQGRSKS+SKK
Sbjct: 171 FDDVVATVLEEENRCKNKEDKLVSSQQAEVLTVT--RVRPLECNSSGSKNQGRSKSQSKK 229

Query: 181 NM 183
           NM
Sbjct: 231 NM 229

[Close]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL
Match: A0A5A7V644 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.6e-54
Identity = 128/188 (68.09%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD NA ANIHLALA NVLSSIEEKK AKEIWD LTKLY+AKSLHNKIFLKRKLYTL+MS 
Sbjct: 51  MDGNATANIHLALADNVLSSIEEKKTAKEIWDHLTKLYKAKSLHNKIFLKRKLYTLRMSE 110

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
              +   H +   ++FSQLT L +KI+PN   ELLLQSLP SYDQL+INLTNN+LTDYL+
Sbjct: 111 -STSMTEHMNILNTLFSQLTLLAYKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLS 170

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
            DD+  AVL+++N RKNK+DKLVSSQQA+AL +T  RGR +E +SSGS+NQGRSKSR  +
Sbjct: 171 FDDVTSAVLEEENRRKNKEDKLVSSQQAEALVVT--RGRSSECNSSGSKNQGRSKSR--R 230

Query: 181 NMSATTVE 189
           N+++T  E
Sbjct: 231 NVASTINE 233

[Close]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL
Match: A0A5A7TUN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002510 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.6e-54
Identity = 127/182 (69.78%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD NA+ANIHLAL  NVLSSIEEKKIAKEIWD L KLYEAKSLHNKIFLKRKLYTL+MS 
Sbjct: 51  MDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSG 110

Query: 61  VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYLN 120
             +    H +   ++FSQLT LG+KI+PN   ELLLQSLP SYDQL+INLTNN+LTDYL+
Sbjct: 111 STLMT-EHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLS 170

Query: 121 IDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSKK 180
            DD+   VL+++N  KNK+DKLVSSQQA+ALT+T  R R  E +SSGS+NQGRSKS+SKK
Sbjct: 171 FDDVAATVLEEENRCKNKEDKLVSSQQAEALTVT--RVRPLECNSSGSKNQGRSKSQSKK 229

Query: 181 NM 183
            M
Sbjct: 231 KM 229

[Close]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL
Match: A0A6A6MLA0 (CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_027382 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 9.3e-49
Identity = 117/182 (64.29%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD+NAIAN+HLA+A  VLSS+ EKK AKEIWD LT LYEAKSLHNKIFLKR+LYTL+MS 
Sbjct: 109 MDDNAIANLHLAMADTVLSSVAEKKTAKEIWDTLTGLYEAKSLHNKIFLKRRLYTLRMSE 168

Query: 61  -VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYL 120
              + D  H +N  ++FSQLT+L + I  N   ELLLQSLP SYDQL+INLTNN+LTDYL
Sbjct: 169 STSVTD--HINNLNTLFSQLTALEYHIAENERAELLLQSLPDSYDQLIINLTNNILTDYL 228

Query: 121 NIDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSK 180
             +D+  AVL++++ RKNK+DKL +SQQ +AL +   RGR  E  SSGSQN  RSKSRSK
Sbjct: 229 VFNDVAAAVLEEESRRKNKEDKLFTSQQTEALLMM--RGRSMEHGSSGSQNHSRSKSRSK 286

Query: 181 KN 182
           KN
Sbjct: 289 KN 286

[Close]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL
Match: A0A6A6KV10 (CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_022155 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 115/182 (63.19%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 1   MDENAIANIHLALAHNVLSSIEEKKIAKEIWDQLTKLYEAKSLHNKIFLKRKLYTLQMSR 60
           MD+NAIA++HLA+A  VLSS+ EKK AKEIWD LT LYEAKSLHNKIFLKR+LYT +MS 
Sbjct: 87  MDDNAIAHLHLAMADTVLSSVAEKKTAKEIWDTLTGLYEAKSLHNKIFLKRRLYTFRMSE 146

Query: 61  -VHINDGAHKHNEYSIFSQLTSLGHKIQPNVCVELLLQSLPHSYDQLLINLTNNVLTDYL 120
              + D  H +N  ++FSQLT+L + I  N   ELLLQSLP SYDQL+INLTNN+LTDYL
Sbjct: 147 STSVTD--HINNLNTLFSQLTALEYHIAENERTELLLQSLPDSYDQLIINLTNNILTDYL 206

Query: 121 NIDDIVPAVLKDKNWRKNKKDKLVSSQQAKALTLTVPRGRLAERSSSGSQNQGRSKSRSK 180
             +D+  AVL++++ RKNK+DKL +SQQ +AL +   RGR   R SSGSQN  RSKSRSK
Sbjct: 207 VFNDVAAAVLEEESRRKNKEDKLFTSQQTEALLMM--RGRSMARGSSGSQNHSRSKSRSK 264

Query: 181 KN 182
           KN
Sbjct: 267 KN 264

The following BLAST results are available for this feature:

BLAST of CmUC03G060040 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16527.1	3.3e-56	71.43	hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]	[more]
KAA0061179.1	1.2e-53	68.09	Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa...	[more]
KAA0044949.1	1.2e-53	69.78	hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]	[more]
KAF2314531.1	1.9e-48	64.29	hypothetical protein GH714_027382 [Hevea brasiliensis]	[more]
KAF2291279.1	2.8e-47	63.19	hypothetical protein GH714_022155 [Hevea brasiliensis] >KAF2291288.1 hypothetica...	[more]

BLAST of CmUC03G060040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.0e-15	35.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXA6	1.6e-56	71.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V644	5.6e-54	68.09	Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 S...	[more]
A0A5A7TUN0	5.6e-54	69.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6A6MLA0	9.3e-49	64.29	CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_02738...	[more]
A0A6A6KV10	1.3e-47	63.19	CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_02215...	[more]

BLAST of CmUC03G060040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 2..137 e-value: 4.0E-21 score: 75.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..183
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 1..182
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G060040.1	CmUC03G060040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0019538	protein metabolic process
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding