CmUC03G059910 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G059910
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein P200-like isoform X4
Location	CmU531Chr03: 17754883 .. 17755179 (+)
RNA-Seq Expression	CmUC03G059910
Synteny	CmUC03G059910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCATACCTTGTCAAGGAGAGAGTTCCAAGCACTCTGTAAGAGGAATAAGATTCTGGCCAATATCACTAATGTCGCCATGGCCTCCGCTCTTGCCGCTCTCCCATCTGTTGAAGTAATCAAAGAGTTTTTGAATGGTGAAAGATTTGCAGTACCAGAATCGTCGATGAAAGAAGAGTTTGTTTCCTCCGAAATTCCACAAATTGCATTGAGAACCTCAACAAGAGAAAAGGCCGTCAAAGGTGACACAATGACTACTTATGCACAACTACTTATGCACATCATGCTGTAG

mRNA sequence

ATGGGTTTCCATACCTTGTCAAGGAGAGAGTTCCAAGCACTCTGTAAGAGGAATAAGATTCTGGCCAATATCACTAATGTCGCCATGGCCTCCGCTCTTGCCGCTCTCCCATCTGTTGAAGTAATCAAAGAGTTTTTGAATGGTGAAAGATTTGCAGTACCAGAATCGTCGATGAAAGAAGAGTTTGTTTCCTCCGAAATTCCACAAATTGCATTGAGAACCTCAACAAGAGAAAAGGCCGTCAAAGGTGACACAATGACTACTTATGCACAACTACTTATGCACATCATGCTGTAG

Coding sequence (CDS)

ATGGGTTTCCATACCTTGTCAAGGAGAGAGTTCCAAGCACTCTGTAAGAGGAATAAGATTCTGGCCAATATCACTAATGTCGCCATGGCCTCCGCTCTTGCCGCTCTCCCATCTGTTGAAGTAATCAAAGAGTTTTTGAATGGTGAAAGATTTGCAGTACCAGAATCGTCGATGAAAGAAGAGTTTGTTTCCTCCGAAATTCCACAAATTGCATTGAGAACCTCAACAAGAGAAAAGGCCGTCAAAGGTGACACAATGACTACTTATGCACAACTACTTATGCACATCATGCTGTAG

Protein sequence

MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKEEFVSSEIPQIALRTSTREKAVKGDTMTTYAQLLMHIML

Homology

[Close]

BLAST of CmUC03G059910 vs. NCBI nr
Match: XP_031740824.1 (midasin-like [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKA 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
            +SSEIP+IALRTSTR KAVK +T+TT
Sbjct: 61 GVISSEIPRIALRTSTRRKAVKDETITT 88

[Close]

BLAST of CmUC03G059910 vs. NCBI nr
Match: KAE8648245.1 (hypothetical protein Csa_018446, partial [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKA 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
            +SSEIP+IALRTSTR KAVK +T+TT
Sbjct: 61 GVISSEIPRIALRTSTRRKAVKDETITT 88

[Close]

BLAST of CmUC03G059910 vs. NCBI nr
Match: XP_031742149.1 (probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 7.1e-25
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M F+TLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFYTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKG 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
          E +SSEIP+ ALRTSTR KAVK +T+TT
Sbjct: 61 EVISSEIPRTALRTSTRRKAVKDETITT 88

[Close]

BLAST of CmUC03G059910 vs. NCBI nr
Match: XP_011654865.2 (probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8647937.1 hypothetical protein Csa_000497 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 7.1e-25
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M F+TLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFYTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKG 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
          E +SSEIP+ ALRTSTR KAVK +T+TT
Sbjct: 61 EVISSEIPRTALRTSTRRKAVKDETITT 88

[Close]

BLAST of CmUC03G059910 vs. NCBI nr
Match: KAA0055115.1 (putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 2.7e-24
Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKV 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMT 88
          E +S EIP+ ALRTSTR KAVK +T+T
Sbjct: 61 EVISLEIPRTALRTSTRRKAVKDETIT 87

[Close]

BLAST of CmUC03G059910 vs. ExPASy TrEMBL
Match: A0A0A0KJF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077220 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 9.0e-26
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKA 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
            +SSEIP+IALRTSTR KAVK +T+TT
Sbjct: 61 GVISSEIPRIALRTSTRRKAVKDETITT 88

[Close]

BLAST of CmUC03G059910 vs. ExPASy TrEMBL
Match: A0A5A7UN97 (Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00410 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-24
Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPES MK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKV 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMT 88
          E +S EIP+ ALRTSTR KAVK +T+T
Sbjct: 61 EVISLEIPRTALRTSTRRKAVKDETIT 87

[Close]

BLAST of CmUC03G059910 vs. ExPASy TrEMBL
Match: A0A1S3CT90 (probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-24
Identity = 66/88 (75.00%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  V ES MK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVSESPMKV 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
          E +S EIP+ ALRTSTR KAVK +T+TT
Sbjct: 61 EVISLEIPRTALRTSTRRKAVKDETITT 88

[Close]

BLAST of CmUC03G059910 vs. ExPASy TrEMBL
Match: A0A0A0KKZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169010 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.2e-23
Identity = 67/89 (75.28%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMK- 60
          M F+TLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFL+G+R  VPES MK 
Sbjct: 1  MDFYTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLDGDRSGVPESPMKG 60

Query: 61 EEFVSSEIPQIALRTSTREKAVKGDTMTT 89
          EE VSSEI + ALRTSTR KAVK +T+TT
Sbjct: 61 EEVVSSEIARTALRTSTRRKAVKDETITT 89

[Close]

BLAST of CmUC03G059910 vs. ExPASy TrEMBL
Match: A0A6J1I214 (uncharacterized protein LOC111469129 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469129 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-22
Identity = 63/88 (71.59%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FH+LSRRE Q LCKRNKI ANITNVAMA ALAALP VE I+EFL+ ER  VPES MK 
Sbjct: 1  MDFHSLSRRELQTLCKRNKIPANITNVAMADALAALPLVEGIEEFLSSERSGVPESPMKG 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTT 89
          E VS EIP+  LRTSTR K VK D +TT
Sbjct: 61 EVVSFEIPRTELRTSTRRKTVKDDPITT 88

[Close]

BLAST of CmUC03G059910 vs. TAIR 10
Match: AT5G17160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast hits to 10381 proteins in 896 species: Archae - 94; Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants - 515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.7e-11
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FH+L RR+ Q LCKRNKI AN+TN+AMA AL +L  V+ + E++N    + P S    
Sbjct: 1  MDFHSLLRRDLQFLCKRNKIPANMTNIAMADALKSLEIVDGLDEYMNQSESSAPHSPTS- 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGD 85
            V+   P  A RT+ R+   K +
Sbjct: 61 --VAKLPPSTATRTTRRKTTTKAE 81

[Close]

BLAST of CmUC03G059910 vs. TAIR 10
Match: AT3G03130.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17160.1); Has 7130 Blast hits to 3690 proteins in 504 species: Archae - 22; Bacteria - 2666; Metazoa - 1654; Fungi - 721; Plants - 246; Viruses - 56; Other Eukaryotes - 1765 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 6.8e-10
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESSMKE 60
          M FH+L RR+ Q  CKRNKI AN+TN+AMA AL  L  VE + EF++  R   P S    
Sbjct: 1  MDFHSLPRRDLQFFCKRNKIPANMTNIAMADALRDLEIVEGMDEFMDPSRDQSPTS---- 60

Query: 61 EFVSSEIPQIA--LRTSTREKAVKGDTMTT 89
            V+  +P  A     +TR K+ K +T ++
Sbjct: 61 --VARNLPSAARTAARTTRRKSTKDETQSS 84

[Close]

BLAST of CmUC03G059910 vs. TAIR 10
Match: AT1G76740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits to 2942 proteins in 407 species: Archae - 9; Bacteria - 440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses - 8; Other Eukaryotes - 1293 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.5e-04
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAAL 37
          M FH + R++ QALCK+N I AN+ N+ MA+ LA++
Sbjct: 1  MNFHGMKRKDLQALCKKNGIPANLKNIEMATRLASV 36

The following BLAST results are available for this feature:

BLAST of CmUC03G059910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740824.1	1.9e-25	77.27	midasin-like [Cucumis sativus]	[more]
KAE8648245.1	1.9e-25	77.27	hypothetical protein Csa_018446, partial [Cucumis sativus]	[more]
XP_031742149.1	7.1e-25	76.14	probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus]	[more]
XP_011654865.2	7.1e-25	76.14	probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8...	[more]
KAA0055115.1	2.7e-24	75.86	putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa]	[more]

BLAST of CmUC03G059910 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC03G059910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJF8	9.0e-26	77.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077220 PE=4 SV=1	[more]
A0A5A7UN97	1.3e-24	75.86	Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CT90	2.9e-24	75.00	probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE...	[more]
A0A0A0KKZ3	3.2e-23	75.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169010 PE=4 SV=1	[more]
A0A6J1I214	2.1e-22	71.59	uncharacterized protein LOC111469129 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmUC03G059910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17160.1	4.7e-11	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G03130.1	6.8e-10	42.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G76740.1	2.5e-04	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33621	ASPARTIC/GLUTAMIC ACID-RICH PROTEIN	coord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G059910.1	CmUC03G059910.1	mRNA