CmUC03G059900 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G059900
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	HEAT repeat-containing protein 5B isoform X2
Location	CmU531Chr03: 17753537 .. 17753821 (+)
RNA-Seq Expression	CmUC03G059900
Synteny	CmUC03G059900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAACAGATCCCTCCTATAATCCTGTTGCTTCCACTGTAGAGATTGAAGCTGAATTTTTACTTTTTACACCATTATTAGCTTATTTGCCTAAGGAGGAACTTGAAGATCAGGTTTTTGATATTCTTTCCTTGTGGATCCCGTTTTTTGCTTGTGAGGAGAGCAGTGGAATGATGTCCCTTCTTGGAGTTGTGGAGCAGTGTTTGAAAACTGGAAAGAAACAGCCACGGAATGATGCTGTCACTAGGGGGATGATTGTTGGTTTAAGGCACTTTAAATCATGA

mRNA sequence

ATGCTAACAGATCCCTCCTATAATCCTGTTGCTTCCACTGTAGAGATTGAAGCTGAATTTTTACTTTTTACACCATTATTAGCTTATTTGCCTAAGGAGGAACTTGAAGATCAGGTTTTTGATATTCTTTCCTTGTGGATCCCGTTTTTTGCTTGTGAGGAGAGCAGTGGAATGATGTCCCTTCTTGGAGTTGTGGAGCAGTGTTTGAAAACTGGAAAGAAACAGCCACGGAATGATGCTGTCACTAGGGGGATGATTGTTGGTTTAAGGCACTTTAAATCATGA

Coding sequence (CDS)

ATGCTAACAGATCCCTCCTATAATCCTGTTGCTTCCACTGTAGAGATTGAAGCTGAATTTTTACTTTTTACACCATTATTAGCTTATTTGCCTAAGGAGGAACTTGAAGATCAGGTTTTTGATATTCTTTCCTTGTGGATCCCGTTTTTTGCTTGTGAGGAGAGCAGTGGAATGATGTCCCTTCTTGGAGTTGTGGAGCAGTGTTTGAAAACTGGAAAGAAACAGCCACGGAATGATGCTGTCACTAGGGGGATGATTGTTGGTTTAAGGCACTTTAAATCATGA

Protein sequence

MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGLRHFKS

Homology

[Close]

BLAST of CmUC03G059900 vs. NCBI nr
Match: XP_022134267.1 (protein SWEETIE [Momordica charantia])

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-10
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFF 51
           MLTDPS NPVASTVE EA +LL + LLA LPKEELEDQVFDILSLW  FF
Sbjct: 524 MLTDPSRNPVASTVENEAGWLLLSSLLACLPKEELEDQVFDILSLWAAFF 573

[Close]

BLAST of CmUC03G059900 vs. NCBI nr
Match: XP_008459470.1 (PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo])

HSP 1 Score: 75.5 bits (184), Expect = 2.8e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. NCBI nr
Match: XP_008459470.1 (PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo])

HSP 1 Score: 60.5 bits (145), Expect = 9.2e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGL 90
           FAC++SSGM+SLLGV+EQCLKTGKKQP + A    + VGL
Sbjct: 765 FACQDSSGMLSLLGVIEQCLKTGKKQPWHAASVTNICVGL 804

HSP 2 Score: 75.5 bits (184), Expect = 2.8e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVASTVE EA +LL + LLA +PKEELED+VFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVASTVENEAGWLLLSSLLACMPKEELEDEVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. NCBI nr
Match: XP_011656034.1 (protein SWEETIE [Cucumis sativus] >KAE8648964.1 hypothetical protein Csa_007912 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 9.2e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGL 90
           FAC++SSGM+SLLGV+EQCLKTGKKQP + A    + VGL
Sbjct: 765 FACQDSSGMLSLLGVIEQCLKTGKKQPWHAASVTNICVGL 804

HSP 2 Score: 75.5 bits (184), Expect = 2.8e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. NCBI nr
Match: KAA0039373.1 (HEAT repeat-containing protein 5B isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 9.2e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGL 90
           FAC++SSGM+SLLGV+EQCLKTGKKQP + A    + VGL
Sbjct: 766 FACQDSSGMLSLLGVIEQCLKTGKKQPWHAASVTNICVGL 805

HSP 2 Score: 75.5 bits (184), Expect = 2.8e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. ExPASy Swiss-Prot
Match: F4HRS2 (Protein SWEETIE OS=Arabidopsis thaliana OX=3702 GN=SWEETIE PE=1 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 4.0e-04
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLT+   N   ++ E EA +LL + LL  +PKEE  DQ FDIL LW   FA
Sbjct: 524 MLTESRRNVTVASSEKEAGWLLLSSLLNSMPKEEFGDQDFDILILWTDVFA 574

HSP 2 Score: 45.1 bits (105), Expect = 5.2e-04
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDA----VTRGMIVGLR 91
           FA ++S GM+SLL V++QCLK GKKQ    A    +  G++ GL+
Sbjct: 762 FASQDSQGMLSLLSVIQQCLKAGKKQQWRTASLTNICAGLLAGLK 806

[Close]

BLAST of CmUC03G059900 vs. ExPASy TrEMBL
Match: A0A6J1BZ65 (protein SWEETIE OS=Momordica charantia OX=3673 GN=LOC111006570 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.0e-11
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFF 51
           MLTDPS NPVASTVE EA +LL + LLA LPKEELEDQVFDILSLW  FF
Sbjct: 524 MLTDPSRNPVASTVENEAGWLLLSSLLACLPKEELEDQVFDILSLWAAFF 573

[Close]

BLAST of CmUC03G059900 vs. ExPASy TrEMBL
Match: A0A5A7T8T6 (HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001750 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. ExPASy TrEMBL
Match: A0A5A7T8T6 (HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001750 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGL 90
           FAC++SSGM+SLLGV+EQCLKTGKKQP + A    + VGL
Sbjct: 766 FACQDSSGMLSLLGVIEQCLKTGKKQPWHAASVTNICVGL 805

HSP 2 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 505 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 555

[Close]

BLAST of CmUC03G059900 vs. ExPASy TrEMBL
Match: A0A5D3BL71 (HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001760 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGL 90
           FAC++SSGM+SLLGV+EQCLKTGKKQP + A    + VGL
Sbjct: 746 FACQDSSGMLSLLGVIEQCLKTGKKQPWHAASVTNICVGL 785

HSP 2 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. ExPASy TrEMBL
Match: A0A1S3CAC7 (HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498597 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDAVTRGMIVGL 90
           FAC++SSGM+SLLGV+EQCLKTGKKQP + A    + VGL
Sbjct: 765 FACQDSSGMLSLLGVIEQCLKTGKKQPWHAASVTNICVGL 804

HSP 2 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLTDPS NPVA+TVE EA +LL + LLA +PKEELEDQVFDILSLW  FF+
Sbjct: 524 MLTDPSRNPVATTVENEAGWLLLSSLLACMPKEELEDQVFDILSLWAAFFS 574

[Close]

BLAST of CmUC03G059900 vs. TAIR 10
Match: AT1G67140.1 (HEAT repeat-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.9e-05
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLT+   N   ++ E EA +LL + LL  +PKEE  DQ FDIL LW   FA
Sbjct: 524 MLTESRRNVTVASSEKEAGWLLLSSLLNSMPKEEFGDQDFDILILWTDVFA 574

HSP 2 Score: 45.1 bits (105), Expect = 3.7e-05
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDA----VTRGMIVGLR 91
           FA ++S GM+SLL V++QCLK GKKQ    A    +  G++ GL+
Sbjct: 762 FASQDSQGMLSLLSVIQQCLKAGKKQQWRTASLTNICAGLLAGLK 806

[Close]

BLAST of CmUC03G059900 vs. TAIR 10
Match: AT1G67140.3 (HEAT repeat-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.9e-05
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLT+   N   ++ E EA +LL + LL  +PKEE  DQ FDIL LW   FA
Sbjct: 524 MLTESRRNVTVASSEKEAGWLLLSSLLNSMPKEEFGDQDFDILILWTDVFA 574

HSP 2 Score: 45.1 bits (105), Expect = 3.7e-05
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDA----VTRGMIVGLR 91
           FA ++S GM+SLL V++QCLK GKKQ    A    +  G++ GL+
Sbjct: 762 FASQDSQGMLSLLSVIQQCLKAGKKQQWRTASLTNICAGLLAGLK 806

[Close]

BLAST of CmUC03G059900 vs. TAIR 10
Match: AT1G67140.2 (HEAT repeat-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.9e-05
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 1   MLTDPSYNPVASTVEIEAEFLLFTPLLAYLPKEELEDQVFDILSLWIPFFA 52
           MLT+   N   ++ E EA +LL + LL  +PKEE  DQ FDIL LW   FA
Sbjct: 524 MLTESRRNVTVASSEKEAGWLLLSSLLNSMPKEEFGDQDFDILILWTDVFA 574

HSP 2 Score: 45.1 bits (105), Expect = 3.7e-05
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 50  FACEESSGMMSLLGVVEQCLKTGKKQPRNDA----VTRGMIVGLR 91
           FA ++S GM+SLL V++QCLK GKKQ    A    +  G++ GL+
Sbjct: 762 FASQDSQGMLSLLSVIQQCLKAGKKQQWRTASLTNICAGLLAGLK 806

The following BLAST results are available for this feature:

BLAST of CmUC03G059900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134267.1	1.2e-10	80.00	protein SWEETIE [Momordica charantia]	[more]
XP_008459470.1	2.8e-10	74.51	PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo]	[more]
XP_008459470.1	9.2e-06	67.50	PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo]	[more]
XP_011656034.1	9.2e-06	67.50	protein SWEETIE [Cucumis sativus] >KAE8648964.1 hypothetical protein Csa_007912 ...	[more]
KAA0039373.1	9.2e-06	67.50	HEAT repeat-containing protein 5B isoform X2 [Cucumis melo var. makuwa]	[more]

Pages

BLAST of CmUC03G059900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HRS2	4.0e-04	49.02	Protein SWEETIE OS=Arabidopsis thaliana OX=3702 GN=SWEETIE PE=1 SV=2	[more]

BLAST of CmUC03G059900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ65	6.0e-11	80.00	protein SWEETIE OS=Momordica charantia OX=3673 GN=LOC111006570 PE=4 SV=1	[more]
A0A5A7T8T6	1.3e-10	74.51	HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7T8T6	4.5e-06	67.50	HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5D3BL71	4.5e-06	67.50	HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CAC7	4.5e-06	67.50	HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

Pages

BLAST of CmUC03G059900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67140.1	2.9e-05	49.02	HEAT repeat-containing protein	[more]
AT1G67140.3	2.9e-05	49.02	HEAT repeat-containing protein	[more]
AT1G67140.2	2.9e-05	49.02	HEAT repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044218	Protein SWEETIE	PANTHER	PTHR46975	PROTEIN SWEETIE	coord: 1..50 coord: 49..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G059900.1	CmUC03G059900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process