CmUC03G059260 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G059260
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Translocase subunit seca
Location	CmU531Chr03: 12767196 .. 12768902 (-)
RNA-Seq Expression	CmUC03G059260
Synteny	CmUC03G059260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATATTGAATAGAGAGGAAATCTCTCCATCTCTCTCTCTCTATATCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCCCTTCTCTCTCCCTTCCCTCTTCATTTTATTTTCCCATTAACAAATCCGATTCCCCTGTCTCTTTGTCCCTTCTCTTATGTTCTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGTATAATCTCTCTGCTATCACTTTTCTTTTCTTTGTTTTTTCTTCCTCTTTCATTCTAACTTCCAGCCTCTTTCACTTCCAACTTTCAATTTTCAGATCTAAGTATTTACAGGATTGTGTTTTTAGCTTAGATGTTAAGCAAAAACCAAATTTTTTAGAGAGATTTAAGTTGTTTTTCAACTACCATATGCTTCTGCTATATCTATTGTGAATTGGGTTTCCTTTTCCTGTTTGTTTACAAGATTTGTTTGTCTTGTCTGTACAGCCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCATGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCAACGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTCGATCTCCTCTTCTTTAAGGTACATAATTTTTGCTTTTAATTATTGAAATTTAATCGATTTCATCTAATAAAAGAAGAAGATGTTTTTTTTCAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTACACAATTAGCCTCGTCGCCTCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAGAAACCCGATCCAAGCCGAGCTGAGCCGAGCTGATTGAGCAATGATGATGAAGAAGAAAACAAACACATGGATTTTTATTTTTTTTCCCTACAATTTTAAATTAAATATTTAAAGTAAAATTTTGAAAAAAAAAAAAGAACTTTTTTGACCAAACACCATTATTGTAAATAATGTGAAAAAGAAATCCAAGTAAATATTATGTTAAAAGAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCCTTGTTAGGTTTCTTTTCTCTATTTAGTTGAGTTGAGGGTTGAGAGTCCTTGTTTGACCAATTGAAGAATAAAAGGCAGAAGGAGAGAGAGATTATTCATAGGTTTTTGTGAATTGAGAGAATTAATTTGCCCTCTCTCTTTCTCTTCTCTATTTTGTGTAATATATGTAAGTGTTTTTCTTTTATCTTTTATCTTTTTTCTTTAGGAGAGTCCAAGAGACCAAGGTTGTTTCTTTGTGTAATTCAAGGGCAAACTTTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATTGAAGCTGCATAAATTTAATATCAATCAAGTAGATCTTTATTTTGTCTTATAGACTTTTCCTTCTCTCT

mRNA sequence

GAATATTGAATAGAGAGGAAATCTCTCCATCTCTCTCTCTCTATATCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCCCTTCTCTCTCCCTTCCCTCTTCATTTTATTTTCCCATTAACAAATCCGATTCCCCTGTCTCTTTGTCCCTTCTCTTATGTTCTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGCCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCATGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCAACGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTCGATCTCCTCTTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTACACAATTAGCCTCGTCGCCTCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAGAAACCCGATCCAAGCCGAGCTGAGCCGAGCTGATTGAGCAATGATGATGAAGAAGAAAACAAACACATGGATTTTTATTTTTTTTCCCTACAATTTTAAATTAAATATTTAAAGTAAAATTTTGAAAAAAAAAAAAGAACTTTTTTGACCAAACACCATTATTGTAAATAATGTGAAAAAGAAATCCAAGTAAATATTATGTTAAAAGAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCCTTGTTAGGTTTCTTTTCTCTATTTAGTTGAGTTGAGGGTTGAGAGTCCTTGTTTGACCAATTGAAGAATAAAAGGCAGAAGGAGAGAGAGATTATTCATAGGTTTTTGTGAATTGAGAGAATTAATTTGCCCTCTCTCTTTCTCTTCTCTATTTTGTGTAATATATGTAAGTGTTTTTCTTTTATCTTTTATCTTTTTTCTTTAGGAGAGTCCAAGAGACCAAGGTTGTTTCTTTGTGTAATTCAAGGGCAAACTTTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATTGAAGCTGCATAAATTTAATATCAATCAAGTAGATCTTTATTTTGTCTTATAGACTTTTCCTTCTCTCT

Coding sequence (CDS)

ATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCATGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCAACGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTCGATCTCCTCTTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTACACAATTAGCCTCGTCGCCTCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAG

Protein sequence

MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA

Homology

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BLAST of CmUC03G059260 vs. NCBI nr
Match: XP_038906747.1 (uncharacterized protein LOC120092671 [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 146/159 (91.82%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEMM+  AADR ER+VCPKPRRLGLMN+ GNDNPFRH FDSDALDLLFFKGGCGL
Sbjct: 1   MNWVCEEMMT--AADRRERLVCPKPRRLGLMNDAGNDNPFRHRFDSDALDLLFFKGGCGL 60

Query: 61  ENFN-RSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN  STQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA
Sbjct: 61  ENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVR+NFGNNPAVRIEGFDCRLDRERRNRS+PALA
Sbjct: 121 GRKGGCVRINFGNNPAVRIEGFDCRLDRERRNRSVPALA 157

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BLAST of CmUC03G059260 vs. NCBI nr
Match: XP_004140334.1 (uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_007795 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 4.9e-76
Identity = 142/159 (89.31%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM + AA DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDALDLLF KGGCGL
Sbjct: 1   MNWVCEEMQT-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL 60

Query: 61  ENFNRS-TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN S  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP SPPPSA
Sbjct: 61  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CmUC03G059260 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 9.2e-75
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM S AA DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDA+DLLF KGGCGL
Sbjct: 1   MNWVCEEMRS-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL 60

Query: 61  ENFNRS-TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           E FN S TQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSA
Sbjct: 61  EKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmUC03G059260 vs. NCBI nr
Match: KAA0047427.1 (uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK04136.1 uncharacterized protein E5676_scaffold2119G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 8.0e-71
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 9   MSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGLENFNRS-T 68
           M +AA DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDA+DLLF KGGCGLE FN S T
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 69  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVR 128
           QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 129 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

[Close]

BLAST of CmUC03G059260 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 8.1e-63
Identity = 127/159 (79.87%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 6   EEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDS----DALDLLFFKGGCGLE 65
           EEMM AA  DR ER+VCPKPRRLGL+N T NDNPFRH FDS    DALDLLFFKGGC LE
Sbjct: 15  EEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLE 74

Query: 66  NF-NRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPSSPPPSA 125
           NF + STQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS 
Sbjct: 75  NFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 126 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmUC03G059260 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.4e-76
Identity = 142/159 (89.31%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM + AA DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDALDLLF KGGCGL
Sbjct: 1   MNWVCEEMQT-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL 60

Query: 61  ENFNRS-TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN S  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP SPPPSA
Sbjct: 61  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmUC03G059260 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM S AA DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDA+DLLF KGGCGL
Sbjct: 1   MNWVCEEMRS-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL 60

Query: 61  ENFNRS-TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           E FN S TQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSA
Sbjct: 61  EKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmUC03G059260 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 9   MSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGLENFNRS-T 68
           M +AA DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDA+DLLF KGGCGLE FN S T
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 69  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVR 128
           QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 129 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

[Close]

BLAST of CmUC03G059260 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.9e-63
Identity = 127/159 (79.87%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 6   EEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDS----DALDLLFFKGGCGLE 65
           EEMM AA  DR ER+VCPKPRRLGL+N T NDNPFRH FDS    DALDLLFFKGGC LE
Sbjct: 15  EEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLE 74

Query: 66  NF-NRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPSSPPPSA 125
           NF + STQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS 
Sbjct: 75  NFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 126 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of CmUC03G059260 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.7e-63
Identity = 127/159 (79.87%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 6   EEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDS----DALDLLFFKGGCGLE 65
           EEM  AA  DR ER+VCPKPRRLGL+N T NDNPFRH FDS    DALDLLFFKGGC LE
Sbjct: 15  EEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLE 74

Query: 66  NFN-RSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPSSPPPSA 125
           NFN  STQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS 
Sbjct: 75  NFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 126 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of CmUC03G059260 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 82/155 (52.90%), Postives = 98/155 (63.23%), Query Frame = 0


Query: 20  VVCPKPRRLGLMNNTGNDNP-----FRHSF-------DSDALDLLFFKGGCGLENFNRST 79
           VVCPKPRR+GL NN  + +      F H         ++D LD++  K G G E  N+  
Sbjct: 32  VVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDIILTKDGYGAEQVNK-- 91

Query: 80  QLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP--AASPPSSPPPSAGRKGG 139
           Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +  P     P SSP  S+GRKGG
Sbjct: 92  QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGG 151

Query: 140 C-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           C VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 152 CVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

[Close]

BLAST of CmUC03G059260 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 6.2e-29
Identity = 83/170 (48.82%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 6   EEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL----- 65
           EEMM     DR + VVCPKPRR+GL+ N     P R      A DL   K G  L     
Sbjct: 81  EEMM---GFDRKDLVVCPKPRRVGLLAN-NVIRPLRLHMSQAAADLCDSKAGAELLEIIR 140

Query: 66  ---ENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------PKLLPLFSPAA 125
              +N      L+SSPPYF GSPPSR ANPL QDARF DEK        P L P +S   
Sbjct: 141 RKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQP-YSATG 200

Query: 126 SPPSSPPPSAGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 159
            P  S   S+    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 201 FPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

[Close]

BLAST of CmUC03G059260 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 6.4e-26
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 6   EEM-MSAAAADRHERVVCPKPRRLGLMNNTGNDN---PFRHSFD-------SDALDLLFF 65
           EEM  +AA +DR + V+CPKPRR+G +N+  + +      H  +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSS 125
           KGG G    +++  + + P +F GSPPSRV+NPL +D+ F +E   LL + SP+ S P +
Sbjct: 73  KGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPRA 132

Query: 126 ---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
               PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 TKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of CmUC03G059260 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 6.4e-26
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 6   EEM-MSAAAADRHERVVCPKPRRLGLMNNTGNDN---PFRHSFD-------SDALDLLFF 65
           EEM  +AA +DR + V+CPKPRR+G +N+  + +      H  +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSS 125
           KGG G    +++  + + P +F GSPPSRV+NPL +D+ F +E   LL + SP+ S P +
Sbjct: 73  KGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPRA 132

Query: 126 ---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
               PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 TKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of CmUC03G059260 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-25
Identity = 79/146 (54.11%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 18  ERVVCPKPRRLGLMNNTGNDNPFRHSFD-SDALDLLFFKGGCG-LENFNRSTQLAS-SPP 77
           + VVCPKPRR    NN     PFR  F  S A D+   K G   L+ F R   ++S SPP
Sbjct: 29  DSVVCPKPRR---ANNV--IRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 78  YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGR-KGGCVRVNFGNN 137
           +F GSPPSR ANPL QDARFGDEK   L   SP+ SP     PSA R K GC R+ FG  
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK---LNTVSPSLSPLL---PSASRVKSGCGRMKFGVK 148

Query: 138 PA-VRIEGFDCRLDRERRNRSIPALA 159
           PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 PATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of CmUC03G059260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906747.1	1.2e-79	91.82	uncharacterized protein LOC120092671 [Benincasa hispida]	[more]
XP_004140334.1	4.9e-76	89.31	uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical ...	[more]
XP_008465783.1	9.2e-75	88.68	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 P...	[more]
KAA0047427.1	8.0e-71	88.74	uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_022971782.1	8.1e-63	79.87	uncharacterized protein LOC111470460 [Cucurbita maxima]	[more]

BLAST of CmUC03G059260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC03G059260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF1	2.4e-76	89.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
A0A1S3CR46	4.4e-75	88.68	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
A0A5D3C147	3.9e-71	88.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1I2X1	3.9e-63	79.87	uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460...	[more]
A0A6J1E6Z2	6.7e-63	79.87	uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]

BLAST of CmUC03G059260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	1.2e-32	52.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	6.2e-29	48.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	6.4e-26	42.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	6.4e-26	42.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02555.1	9.3e-25	54.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..125
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 8..158
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 8..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G059260.1	CmUC03G059260.1	mRNA