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CmUC03G059200 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAGGTGAAGAGATCGAGCGGGACTGTAAGGTGGTTTAGTGCGCAGAAGGGGTTTGGGTTCATAGCTCCAGATGATGCTAGCGACGATCTTTTTGTCCACCAGACCTCTATTCGGTCAGAAGGATTTCGTACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGACGAAGATCAACGCGCCAAAGCCGTCGACGTCGCTGTAATTGGTAGATCTACAGAATATGGAGGAGGCCGTGGAGGCGGGAGAGGTAGAGGTGGTGCTTATGGAAGGTTCGGTGGTGGTGGTCGTGGTTTTGGCAGAGGAGGACGATACGAAGGTCCAAGCGGTGGCTTCGGCGGCGGGGGTGGTGGTCGTGGCGGTGGCGGTGGCGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTATCGAGGAAACGGCGGTGCGCCTCCTGGCCGTGGAGGGGGCCGTGGATACGGCGGTGGTCGGGGTTATGGCGGCGGCGGCGGCGGCGGTTGTTATAATTGTGGAGATACAGGACATTTTGCTAGGGATTGTCAAAACGAAAGCAAATGAAGAATGCGGGTCTTCCTTTAAGCGGTATTTACACTTTTTCTGAAGATTATTTTTGTTGGGCTGTTAATTTTTTGGTGCGAATTCTGGGATTTTTAAGTGTGTCGATGACTGCAAGTCTGCAATTGAGGGCACGAGGATCCAAGGCAATAAACCATAAGGCTTCAATTCATCACTGTTTCTCCTTTTGGGTGTTCATAATTTGTTGTTCATAATTAGATGATGAAACCAATTGTTTGTATATGCTATACCTTTCTGTCATTTCTAATTCATTCTTCCTTTGCTGCTTGTCAATTCTTAACATGTTTCAATATATGATATATGTAATCCGTCAAGGGTGCACGTTCATACCATTTTGTATTTCTTATATACGTTTCATCTTTGTCTATTACTGTAATGGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCCCTATTATTAATTTCTTGGTGCTTTCCTGGGTTTCTTTGCCTCGAAACTTCCATTATTGGTGTTGGGTTGCAAATGATAATAATTGTCCTGCACCATGTACTCTATTATTGCCTGTGTTTTCCCCGGAAAATGAATGATATCAGGGCTCTTAATAATATTCTAGATAATTTTTAAAATTTTCATAGGAGAAGCTAAAACCCATTTCGGGGTTTCAATTATCTGCTAATAGTTATGGCTGGATTTGAATTTTCTCCTTTTGGTTTGTTTCACACATGAAAACTCTAAGCATGGAAATCTCAGCTGCTGGAGCTGCTTTTGATGTTTAGTAAGATCTTCTTGTAGGTAGATTAGGATTACTAATCATTATTCTTATTTTTCATGTTCTGTGGTTTGATATATGATTTTTGGCTTTCTATTCAATATATGTAGCAACTCTGTCATTATATTTGAAGCTTGAGAAAGTTGGAGGTTGTATTAGATTCAAATCTGATCTGCTTTCTGAGAATTTGTGAAATTCTATGGCCTTTGTTTGACTGTTTCTGCTCTAATTTGTGAAGACTGATATGTAATGCTGCTAGATGAGATGCATGCACAGTTTGCTTGTTTGTTTTATTTGCATTGTGTTTTTCAGATCTCCATCTTCCTTTACAGCAGGTTTATGGAACTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAGGTTGATGAGTGAAAGAACTTTACACAAACGCAGTCCATTGGAAAGTAATGGAAACACCTTGTAA ATGGCTGAGGTGAAGAGATCGAGCGGGACTGTAAGGTGGTTTAGTGCGCAGAAGGGGTTTGGGTTCATAGCTCCAGATGATGCTAGCGACGATCTTTTTGTCCACCAGACCTCTATTCGGTCAGAAGGATTTCGTACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGACGAAGATCAACGCGCCAAAGCCGTCGACGTCGCTGTAATTGGTAGATCTACAGAATATGGAGGAGGCCGTGGAGGCGGGAGAGAGGAGGACGATACGAAGGTCCAAGCGGTGGCTTCGGCGGCGGGGGTGGTGGTCGTGGCGGTGGCGGTGGCGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTATCGAGGAAACGGCGGTGCGCCTCCTGGCCGTGGAGGGGGCCGTGGATACGGCGGTGGTCGGGGTTATGGCGGCGGCGGCGGCGGCGGTTGTTATAATTGTGGAGATACAGGACATTTTGCTAGGGATTGTCAAAACGAAAGCAAATGAAGAATGCGGGTCTTCCTTTAAGCGGTTGATGAGTGAAAGAACTTTACACAAACGCAGTCCATTGGAAAGTAATGGAAACACCTTGTAA ATGGCTGAGGTGAAGAGATCGAGCGGGACTGTAAGGTGGTTTAGTGCGCAGAAGGGGTTTGGGTTCATAGCTCCAGATGATGCTAGCGACGATCTTTTTGTCCACCAGACCTCTATTCGGTCAGAAGGATTTCGTACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGACGAAGATCAACGCGCCAAAGCCGTCGACGTCGCTGTAATTGGTAGATCTACAGAATATGGAGGAGGCCGTGGAGGCGGGAGAGAGGAGGACGATACGAAGGTCCAAGCGGTGGCTTCGGCGGCGGGGGTGGTGGTCGTGGCGGTGGCGGTGGCGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTATCGAGGAAACGGCGGTGCGCCTCCTGGCCGTGGAGGGGGCCGTGGATACGGCGGTGGTCGGGGTTATGGCGGCGGCGGCGGCGGCGGTTGTTATAATTGTGGAGATACAGGACATTTTGCTAGGGATTGTCAAAACGAAAGCAAATGAAGAATGCGGGTCTTCCTTTAAGCGGTTGATGAGTGAAAGAACTTTACACAAACGCAGTCCATTGGAAAGTAATGGAAACACCTTGTAA MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVAVIGRSTEYGGGRGGGREEDDTKVQAVASAAGVVVVAVAVASATIVAGWVIWRGIVIEETAVRLLAVEGAVDTAVVGVMAAAAAAVVIIVEIQDILLGIVKTKANEECGSSFKRLMSERTLHKRSPLESNGNTL Homology
BLAST of CmUC03G059200 vs. NCBI nr
Match: XP_008465791.1 (PREDICTED: cold shock protein 2-like [Cucumis melo] >XP_008465792.1 PREDICTED: cold shock protein 2-like [Cucumis melo] >KAA0047448.1 cold shock protein 2-like [Cucumis melo var. makuwa] >TYJ98642.1 cold shock protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 170.6 bits (431), Expect = 1.4e-38 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. NCBI nr
Match: XP_038906549.1 (glycine-rich protein 2-like [Benincasa hispida]) HSP 1 Score: 169.1 bits (427), Expect = 4.0e-38 Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. NCBI nr
Match: XP_004140332.1 (cold shock protein 2 [Cucumis sativus] >XP_011655173.1 cold shock protein 2 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-37 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. NCBI nr
Match: XP_022141389.1 (glycine-rich protein 2-like [Momordica charantia]) HSP 1 Score: 166.8 bits (421), Expect = 2.0e-37 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. NCBI nr
Match: XP_023549669.1 (glycine-rich protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.8 bits (408), Expect = 6.4e-36 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20 Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy Swiss-Prot
Match: Q41188 (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-19 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy Swiss-Prot
Match: Q38896 (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17 Identity = 48/88 (54.55%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.9e-15 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.6e-13 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy TrEMBL
Match: A0A1S3CPN9 (cold shock protein 2-like OS=Cucumis melo OX=3656 GN=LOC103503390 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 6.6e-39 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy TrEMBL
Match: A0A5A7TX13 (Cold shock protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold507G00260 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 6.6e-39 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy TrEMBL
Match: A0A0A0KRF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G374720 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 7.3e-38 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy TrEMBL
Match: A0A6J1CIH7 (glycine-rich protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011802 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 9.6e-38 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of CmUC03G059200 vs. ExPASy TrEMBL
Match: A0A6J1K351 (cold shock protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489638 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 4.0e-36 Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of CmUC03G059200 vs. TAIR 10
Match: AT4G38680.1 (glycine rich protein 2 ) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CmUC03G059200 vs. TAIR 10
Match: AT2G21060.1 (glycine-rich protein 2B ) HSP 1 Score: 91.7 bits (226), Expect = 7.5e-19 Identity = 48/88 (54.55%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of CmUC03G059200 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 ) HSP 1 Score: 82.8 bits (203), Expect = 3.5e-16 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of CmUC03G059200 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 ) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-14 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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