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CmUC03G059150 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATTTGCTTTCTCTGTTCACATTCCGATTTCAATTCCTATTCTGATTGTTGCAGAGATTTCCAGTCCTTCAGCGTCAAGAATATCGACAAACTTCCCCCATGGATATGCCGAAGGAATGCTTTACGTCTCTGGTCATTCAATTCTCATCTTGTCCTCTTCGTAAACCTTCAAAAAACTTATGCTCAGTCTTTAACCACTCTTCCCACAATTCCAATCGCAACTATCATGTTTTCCTTCCCATTATTTATCCTCAATCCTTAGTCCATACCCATTTTCCATTTCTTCCTTATCTTCTCCCTCAATTTTTCCTCTTTTTCTTCTCTTTTCTTTCACCTCCCTCCCTATTTTTCATTTTATTTCCATCATTATTAGCTTTGATGGTCACAATTAAAGCTCACCCACTATGCTTTCTGCCAATCCTCTAAACTTGTCTTTCAATTTAACTATTTCTTTTCATTAGACAGACAAGGGGGTTTTGCAGTTTTTTTGGAGATGAAGCGAGTTATTCCAGATGGGGATGGAGATCGGAAGATGGGGAAGAAACCTAGAGTGGGAACCCAAGTTTGTGTCGGAGGAGGAGACCCCTCCGACAAGACTGGATCTGCGAATTTGGATGACAATTTGTTGTTTGAGGTTTTTAACCATGTGGATGCCAGGACTCTGGCCATGACAGAGTGTTTGAGCAAGCAAGGATATTGA ATGAAGAAATTTGCTTTCTCTGTTCACATTCCGATTTCAATTCCTATTCTGATTGTTGCAGAGATTTCCAGTCCTTCAGCGTCAAGAATATCGACAAACTTCCCCCATGGATATGCCGAAGGAATGCTTTACGTCTCTGGTCATTCAATTCTCATCTTGTCCTCTTCACAAGGGGGTTTTGCAGTTTTTTTGGAGATGAAGCGAGTTATTCCAGATGGGGATGGAGATCGGAAGATGGGGAAGAAACCTAGAGTGGGAACCCAAGTTTGTGTCGGAGGAGGAGACCCCTCCGACAAGACTGGATCTGCGAATTTGGATGACAATTTGTTGTTTGAGGTTTTTAACCATGTGGATGCCAGGACTCTGGCCATGACAGAGTGTTTGAGCAAGCAAGGATATTGA ATGAAGAAATTTGCTTTCTCTGTTCACATTCCGATTTCAATTCCTATTCTGATTGTTGCAGAGATTTCCAGTCCTTCAGCGTCAAGAATATCGACAAACTTCCCCCATGGATATGCCGAAGGAATGCTTTACGTCTCTGGTCATTCAATTCTCATCTTGTCCTCTTCACAAGGGGGTTTTGCAGTTTTTTTGGAGATGAAGCGAGTTATTCCAGATGGGGATGGAGATCGGAAGATGGGGAAGAAACCTAGAGTGGGAACCCAAGTTTGTGTCGGAGGAGGAGACCCCTCCGACAAGACTGGATCTGCGAATTTGGATGACAATTTGTTGTTTGAGGTTTTTAACCATGTGGATGCCAGGACTCTGGCCATGACAGAGTGTTTGAGCAAGCAAGGATATTGA MKKFAFSVHIPISIPILIVAEISSPSASRISTNFPHGYAEGMLYVSGHSILILSSSQGGFAVFLEMKRVIPDGDGDRKMGKKPRVGTQVCVGGGDPSDKTGSANLDDNLLFEVFNHVDARTLAMTECLSKQGY Homology
BLAST of CmUC03G059150 vs. NCBI nr
Match: XP_038900230.1 (F-box protein GID2 [Benincasa hispida]) HSP 1 Score: 114.8 bits (286), Expect = 5.8e-22 Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of CmUC03G059150 vs. NCBI nr
Match: XP_011654137.1 (F-box protein GID2 [Cucumis sativus] >KGN55239.1 hypothetical protein Csa_012230 [Cucumis sativus]) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-16 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CmUC03G059150 vs. NCBI nr
Match: KAG6608444.1 (F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.7 bits (234), Expect = 6.2e-16 Identity = 47/68 (69.12%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of CmUC03G059150 vs. NCBI nr
Match: KAG7037780.1 (F-box protein GID2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.4 bits (233), Expect = 8.1e-16 Identity = 47/69 (68.12%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CmUC03G059150 vs. NCBI nr
Match: XP_008452610.1 (PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0064421.1 F-box protein GID2-like [Cucumis melo var. makuwa] >TYK20166.1 F-box protein GID2-like [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 8.1e-16 Identity = 49/68 (72.06%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CmUC03G059150 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.5e-04 Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of CmUC03G059150 vs. ExPASy TrEMBL
Match: A0A0A0L2H5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641710 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 6.1e-17 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CmUC03G059150 vs. ExPASy TrEMBL
Match: A0A5A7VFE5 (F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002980 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.9e-16 Identity = 49/68 (72.06%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CmUC03G059150 vs. ExPASy TrEMBL
Match: A0A1S3BV18 (F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103493580 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.9e-16 Identity = 49/68 (72.06%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CmUC03G059150 vs. ExPASy TrEMBL
Match: A0A6J1FA22 (F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111443649 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.7e-16 Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of CmUC03G059150 vs. ExPASy TrEMBL
Match: A0A6J1ILD7 (F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111477283 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.7e-16 Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of CmUC03G059150 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein ) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-05 Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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