CmUC03G057580 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G057580
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	plant-specific TFIIB-related protein PTF2
Location	CmU531Chr03: 8445918 .. 8447842 (-)
RNA-Seq Expression	CmUC03G057580
Synteny	CmUC03G057580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGTTTCGGCTTCCATTCTACAATCCCGATAATGCCATTAGAAGGCCCCATTTATATAATTTGGGCCTATAAACGTGCAGTTCAGTTTAGACAAACGGCCCATTTTCGAAATTCAGCTCTTCCCGCGCCCGATTCCGATTTTCCTCTCAGTTCACATCGCGCGACACTTGCAACCCCTCAGGAAGAGGAATGTTTAATTAGGGTTTGCTGCACTTTGCACAACACGCCGAAATTTTCTTCACCGGCGTATCATTCATCGGTGAAATCTCATAATCTGCTTATAATTTTCTCTTCTCTACTGAACTCTCAAACTAATGCATTGAATTTCTCGTCTTCAATCTCGTCTCTCCGATGTCCGGCTCTTGTAAGAATTGCAACAGCAGATCCCTCTTCCGAGACGATGTTTCCGGCAACCTGATTTGCTCCTCCTGCGGTATTGTTCAGGAATTTGACAATTACGAGGCTCAGCTTGGCGGTATCAATGGTCCACAGGGCACATTCGTCCGCGTTGGAACATCAGGTTCGGGCAGCGTTTTGAATTATAAGGACAAGAAAATCTTTGAGGCTCAAAAAATTATTGAAGATATTACCTTTAGGTTAGGATTTTCTGCTTCCAAATCTAATGATGTTAGGATTTTAGTATCGACGATTACAGAGGGCGAGTATGGATTAGGTGATTGGTTCCCAATTCTCGTTGGTGCTTGTGCGTACGTTTCTATGCGTAAGGATAATCGGCCATTACCAATGTCGGAAATTGCATCCGCCGTCGAATGTGATCTCCATGAACTTGGTAGAATGGTTATCAGAGTTGTTGACTTTTTGGATTTGAAAGGGCCCGAGTTTCCGGTGTTTGATATTGTGGGGTCATTAGAGCGGGCGGCTAGGAATTCACCGTCTTTCTCAAGGGTAGATGCAGATACTCTTGAGAGAATTGTTAAGCAAGGAATCTTTTTGTTACAGTGTGCTGTGAAATGGTTTCTGACAACTGGGCGGCAACCGCTACCAATGGTGGCTGCCGTGTTGGTTCTGGTTTCGGAATTGAATGAGGTTAAGGTCAGTATTGACAATGTAGCAATGGAGGTTCATGCCAAGGTTTCAACATGTAAGAAGAGATACAGGGAACTTCTGGAAGCACTTGTGGAAGTTGGAAAAAAGTTACCTTGGGGAAAAGATATCACAACAAAGAATATTGTGAAGAATGCTCCTTTTGTGATCCAATATATGGAATTGAAATCAATGTCTAATGCCAGTGGTAAGGGGAAGGATTTGGAGAATGTGGGGATTGATTTGCAGTCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTGGAGTATGAGAGTGAGGTTAATAATTTAGAAGATGATTCTCAGTATTTTGAGTTACAAGGCAGTAGTTGGCGTGACGAATCAAGTTGTGATAATGGGAACAAGCTCAATATTTCACATGAATGTTTATCTTTGATTTACCATAAGTTTTTAGATGAAATGGCTCATCTCAAATCATCGGGTGGGATCAATGAGATCTATGGAAGAAAGCAGGGAAGAAAAGCTGGTTTTTGCTCAAGTGCAGAGTGGTGGGAGGGGAAATCAGAATTAAGCAAAAAGCTTCTATTGCAGCAATTATTGGAGACTGATGTAGGGTCGCAGGGTATCCCACCATCATTTGTTTCTAGTTGCAATGCATACAAAAGGAGGAAGGAGAAAGTAAATGCTGCTAAGAAGCGAATTCAGAGGATTATGCATCCTTCTAGTGCTCCAACTGGTGATGTAAATACTGAGAAGAAAAGAAAGCGCAAGGGAGCTAACGGTATAGAATGGGAAGACATAATAATCGAAACCCTTCTTCTTCATGGCGTGGAGGAGGAGGAAATTGAGAAAGGCCATTACAATGTCTTGTTGGACTTGCATGTCTTCAATTCGTGA

mRNA sequence

ATGCAAAGTTTCGGCTTCCATTCTACAATCCCGATAATGCCATTAGAAGGCCCCATTTATATAATTTGGGCCTATAAACGTGCAGTTCAGTTTAGACAAACGGCCCATTTTCGAAATTCAGCTCTTCCCGCGCCCGATTCCGATTTTCCTCTCAGTTCACATCGCGCGACACTTGCAACCCCTCAGGAAGAGGAATGTTTAATTAGGGTTTGCTGCACTTTGCACAACACGCCGAAATTTTCTTCACCGGCGTATCATTCATCGGTGAAATCTCATAATCTGCTTATAATTTTCTCTTCTCTACTGAACTCTCAAACTAATGCATTGAATTTCTCGTCTTCAATCTCGTCTCTCCGATGTCCGGCTCTTGAATTTGACAATTACGAGGCTCAGCTTGGCGGTATCAATGGTCCACAGGGCACATTCGTCCGCGTTGGAACATCAGGTTCGGGCAGCGTTTTGAATTATAAGGACAAGAAAATCTTTGAGGCTCAAAAAATTATTGAAGATATTACCTTTAGGTTAGGATTTTCTGCTTCCAAATCTAATGATGTTAGGATTTTAGTATCGACGATTACAGAGGGCGAGTATGGATTAGGTGATTGGTTCCCAATTCTCGTTGGTGCTTGTGCGTACGTTTCTATGCGTAAGGATAATCGGCCATTACCAATGTCGGAAATTGCATCCGCCGTCGAATGTGATCTCCATGAACTTGGTAGAATGGTTATCAGAGTTGTTGACTTTTTGGATTTGAAAGGGCCCGAGTTTCCGGTGTTTGATATTGTGGGGTCATTAGAGCGGGCGGCTAGGAATTCACCGTCTTTCTCAAGGGTAGATGCAGATACTCTTGAGAGAATTGTTAAGCAAGGAATCTTTTTGTTACAGTGTGCTGTGAAATGGTTTCTGACAACTGGGCGGCAACCGCTACCAATGGTGGCTGCCGTGTTGGTTCTGGTTTCGGAATTGAATGAGGTTAAGGTCAGTATTGACAATGTAGCAATGGAGGTTCATGCCAAGGTTTCAACATGTAAGAAGAGATACAGGGAACTTCTGGAAGCACTTGTGGAAGTTGGAAAAAAGTTACCTTGGGGAAAAGATATCACAACAAAGAATATTGTGAAGAATGCTCCTTTTGTGATCCAATATATGGAATTGAAATCAATGTCTAATGCCAGTGGTAAGGGGAAGGATTTGGAGAATGTGGGGATTGATTTGCAGTCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTGGAGTATGAGAGTGAGGTTAATAATTTAGAAGATGATTCTCAGTATTTTGAGTTACAAGGCAGTAGTTGGCGTGACGAATCAAGTTGTGATAATGGGAACAAGCTCAATATTTCACATGAATGTTTATCTTTGATTTACCATAAGTTTTTAGATGAAATGGCTCATCTCAAATCATCGGGTGGGATCAATGAGATCTATGGAAGAAAGCAGGGAAGAAAAGCTGGTTTTTGCTCAAGTGCAGAGTGGTGGGAGGGGAAATCAGAATTAAGCAAAAAGCTTCTATTGCAGCAATTATTGGAGACTGATGTAGGGTCGCAGGGTATCCCACCATCATTTGTTTCTAGTTGCAATGCATACAAAAGGAGGAAGGAGAAAGTAAATGCTGCTAAGAAGCGAATTCAGAGGATTATGCATCCTTCTAGTGCTCCAACTGGTGATGTAAATACTGAGAAGAAAAGAAAGCGCAAGGGAGCTAACGGTATAGAATGGGAAGACATAATAATCGAAACCCTTCTTCTTCATGGCGTGGAGGAGGAGGAAATTGAGAAAGGCCATTACAATGTCTTGTTGGACTTGCATGTCTTCAATTCGTGA

Coding sequence (CDS)

ATGCAAAGTTTCGGCTTCCATTCTACAATCCCGATAATGCCATTAGAAGGCCCCATTTATATAATTTGGGCCTATAAACGTGCAGTTCAGTTTAGACAAACGGCCCATTTTCGAAATTCAGCTCTTCCCGCGCCCGATTCCGATTTTCCTCTCAGTTCACATCGCGCGACACTTGCAACCCCTCAGGAAGAGGAATGTTTAATTAGGGTTTGCTGCACTTTGCACAACACGCCGAAATTTTCTTCACCGGCGTATCATTCATCGGTGAAATCTCATAATCTGCTTATAATTTTCTCTTCTCTACTGAACTCTCAAACTAATGCATTGAATTTCTCGTCTTCAATCTCGTCTCTCCGATGTCCGGCTCTTGAATTTGACAATTACGAGGCTCAGCTTGGCGGTATCAATGGTCCACAGGGCACATTCGTCCGCGTTGGAACATCAGGTTCGGGCAGCGTTTTGAATTATAAGGACAAGAAAATCTTTGAGGCTCAAAAAATTATTGAAGATATTACCTTTAGGTTAGGATTTTCTGCTTCCAAATCTAATGATGTTAGGATTTTAGTATCGACGATTACAGAGGGCGAGTATGGATTAGGTGATTGGTTCCCAATTCTCGTTGGTGCTTGTGCGTACGTTTCTATGCGTAAGGATAATCGGCCATTACCAATGTCGGAAATTGCATCCGCCGTCGAATGTGATCTCCATGAACTTGGTAGAATGGTTATCAGAGTTGTTGACTTTTTGGATTTGAAAGGGCCCGAGTTTCCGGTGTTTGATATTGTGGGGTCATTAGAGCGGGCGGCTAGGAATTCACCGTCTTTCTCAAGGGTAGATGCAGATACTCTTGAGAGAATTGTTAAGCAAGGAATCTTTTTGTTACAGTGTGCTGTGAAATGGTTTCTGACAACTGGGCGGCAACCGCTACCAATGGTGGCTGCCGTGTTGGTTCTGGTTTCGGAATTGAATGAGGTTAAGGTCAGTATTGACAATGTAGCAATGGAGGTTCATGCCAAGGTTTCAACATGTAAGAAGAGATACAGGGAACTTCTGGAAGCACTTGTGGAAGTTGGAAAAAAGTTACCTTGGGGAAAAGATATCACAACAAAGAATATTGTGAAGAATGCTCCTTTTGTGATCCAATATATGGAATTGAAATCAATGTCTAATGCCAGTGGTAAGGGGAAGGATTTGGAGAATGTGGGGATTGATTTGCAGTCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTGGAGTATGAGAGTGAGGTTAATAATTTAGAAGATGATTCTCAGTATTTTGAGTTACAAGGCAGTAGTTGGCGTGACGAATCAAGTTGTGATAATGGGAACAAGCTCAATATTTCACATGAATGTTTATCTTTGATTTACCATAAGTTTTTAGATGAAATGGCTCATCTCAAATCATCGGGTGGGATCAATGAGATCTATGGAAGAAAGCAGGGAAGAAAAGCTGGTTTTTGCTCAAGTGCAGAGTGGTGGGAGGGGAAATCAGAATTAAGCAAAAAGCTTCTATTGCAGCAATTATTGGAGACTGATGTAGGGTCGCAGGGTATCCCACCATCATTTGTTTCTAGTTGCAATGCATACAAAAGGAGGAAGGAGAAAGTAAATGCTGCTAAGAAGCGAATTCAGAGGATTATGCATCCTTCTAGTGCTCCAACTGGTGATGTAAATACTGAGAAGAAAAGAAAGCGCAAGGGAGCTAACGGTATAGAATGGGAAGACATAATAATCGAAACCCTTCTTCTTCATGGCGTGGAGGAGGAGGAAATTGAGAAAGGCCATTACAATGTCTTGTTGGACTTGCATGTCTTCAATTCGTGA

Protein sequence

MQSFGFHSTIPIMPLEGPIYIIWAYKRAVQFRQTAHFRNSALPAPDSDFPLSSHRATLATPQEEECLIRVCCTLHNTPKFSSPAYHSSVKSHNLLIIFSSLLNSQTNALNFSSSISSLRCPALEFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIYGRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHYNVLLDLHVFNS

Homology

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BLAST of CmUC03G057580 vs. NCBI nr
Match: XP_038893651.1 (plant-specific TFIIB-related protein PTF2 [Benincasa hispida])

HSP 1 Score: 931.0 bits (2405), Expect = 5.2e-267
Identity = 465/490 (94.90%), Postives = 476/490 (97.14%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNYEAQL GINGP GTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN
Sbjct: 32  EFDNYEAQLSGINGPLGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSE+ASAVECDLHELGRMVI
Sbjct: 92  DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEVASAVECDLHELGRMVI 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDLKGPEFPVFDIVGSLERA RNSPSFSRVDAD LERIVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLKGPEFPVFDIVGSLERATRNSPSFSRVDADILERIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS+LNEV VSIDNVAMEVHAKVSTCKKRYRELLEALV+VGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSKLNEVDVSIDNVAMEVHAKVSTCKKRYRELLEALVKVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVG+DLQSAVSECLRKELEYESEV
Sbjct: 272 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGVDLQSAVSECLRKELEYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFELQGSSWRDESSCDNGN+LNISHECLSLIYHKFLDEMAHLKSSGGINE+Y
Sbjct: 332 NNLEDDSQYFELQGSSWRDESSCDNGNRLNISHECLSLIYHKFLDEMAHLKSSGGINEVY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRKQGRKAGF SS EWWEGKSELSKKLLLQQLLE D+GSQGIPPSFVSSCNAYKRRKEK+
Sbjct: 392 GRKQGRKAGFYSSTEWWEGKSELSKKLLLQQLLEIDIGSQGIPPSFVSSCNAYKRRKEKI 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
            AAKKRIQRIM PS+AP GDVN EKKRKRKG NGIEWEDIIIETLLLHGV+EEEIEKGHY
Sbjct: 452 IAAKKRIQRIMLPSNAPIGDVNIEKKRKRKGTNGIEWEDIIIETLLLHGVKEEEIEKGHY 511

Query: 604 NVLLDLHVFN 614
           N LLDLHVFN
Sbjct: 512 NALLDLHVFN 521

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BLAST of CmUC03G057580 vs. NCBI nr
Match: XP_008443157.1 (PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo] >KAA0057033.1 transcription factor IIIB 50 kDa subunit [Cucumis melo var. makuwa])

HSP 1 Score: 909.8 bits (2350), Expect = 1.2e-260
Identity = 452/491 (92.06%), Postives = 476/491 (96.95%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EF+NYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKK++EAQK+IEDITFRLGFSASKSN
Sbjct: 32  EFENYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKVYEAQKVIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPL MSE+ASAVECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLSMSEVASAVECDLHELGRMVM 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDL+G EFPVFDIVGSLERAARNSPSFSR++AD LERIVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLRGSEFPVFDIVGSLERAARNSPSFSRLEADILERIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS+LNEV VS++NVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSKLNEVDVSMENVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV
Sbjct: 272 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFELQGS W DES+CDNGN+LNISHECLSLIY+KFLDEMA L+SSGGIN++Y
Sbjct: 332 NNLEDDSQYFELQGSRWCDESNCDNGNRLNISHECLSLIYNKFLDEMAELRSSGGINDVY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRKQGRKAGF SS EWWEGKS LSKKLLLQQLLETD+GSQGIPPSFVSSCNAYKRRKEKV
Sbjct: 392 GRKQGRKAGFYSSTEWWEGKSVLSKKLLLQQLLETDIGSQGIPPSFVSSCNAYKRRKEKV 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAKKRIQRIMHPS+AP GDVN +KKRKRKGA+ IEWEDIIIETLLLHGV+EEEIEKGHY
Sbjct: 452 NAAKKRIQRIMHPSNAPAGDVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
            VLLDLHVF S
Sbjct: 512 KVLLDLHVFTS 522

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BLAST of CmUC03G057580 vs. NCBI nr
Match: XP_004149065.1 (plant-specific TFIIB-related protein PTF2 [Cucumis sativus] >KGN65641.1 hypothetical protein Csa_019679 [Cucumis sativus])

HSP 1 Score: 883.6 bits (2282), Expect = 9.5e-253
Identity = 442/491 (90.02%), Postives = 468/491 (95.32%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNY+AQLGGINGPQGTFVRVGTSGSGSVLNYKDKKI+EAQK+IEDITFRLGFSASKSN
Sbjct: 32  EFDNYDAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKVIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKD+RPL MSE+ASAVECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVM 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVV+FLDL+G EFPVFDIVGSLERAARNSPSFSR++AD LERIVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVEFLDLRGSEFPVFDIVGSLERAARNSPSFSRLEADILERIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS+LNEV VSI+NV MEVHA VSTCKKRYRELLEALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSKLNEVDVSIENVGMEVHANVSTCKKRYRELLEALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDITTKNIVKNAPFVIQYMELKSMS ASGKGKDLENV IDLQSAVSECLRKELEYESEV
Sbjct: 272 GKDITTKNIVKNAPFVIQYMELKSMSKASGKGKDLENVEIDLQSAVSECLRKELEYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
            NLEDDSQYFELQ S W+DES+ DNGN+LNISHECLSLIY+KFLDEMA L+SSGGINE+Y
Sbjct: 332 YNLEDDSQYFELQRSRWQDESNRDNGNRLNISHECLSLIYNKFLDEMAELRSSGGINEVY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           G KQGRK GF SS EWWEGKSELSKKLLLQQLLETD+GSQGIPPSFVSSCNAY+RRKEKV
Sbjct: 392 GTKQGRKTGFYSSTEWWEGKSELSKKLLLQQLLETDIGSQGIPPSFVSSCNAYERRKEKV 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAKKRIQRIMHPS+AP  DVN +KKRKRKGA+ IEWEDIIIETLLLHGV+EEEIEKGHY
Sbjct: 452 NAAKKRIQRIMHPSTAPADDVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
            VLLDL+VF S
Sbjct: 512 KVLLDLYVFTS 522

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BLAST of CmUC03G057580 vs. NCBI nr
Match: XP_023542889.1 (plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 862.8 bits (2228), Expect = 1.7e-246
Identity = 431/491 (87.78%), Postives = 459/491 (93.48%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNY+AQLGG+NGPQGTFVRVGTSGSGSVLNYKDKKI+EAQKIIEDITFRLGFSASKSN
Sbjct: 32  EFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKIIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYG GDWF ILVGAC+YVSMRKDNRPLPMSE+AS +ECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGQGDWFSILVGACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVL 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDLKGP FP FDIVGSLERAARNSPSFS+V+ADTL+ IVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLKGPAFPGFDIVGSLERAARNSPSFSKVEADTLDIIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS LNEV VSID+VAMEVHAKVSTCKKRYRELL ALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSGLNEVNVSIDDVAMEVHAKVSTCKKRYRELLGALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDIT +NIVKNAPFVIQYMELKSMSN  G+GK+ E+VGIDLQ+AVSECLRKEL+YESEV
Sbjct: 272 GKDITKRNIVKNAPFVIQYMELKSMSNTCGRGKNFEDVGIDLQAAVSECLRKELQYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFEL G+SWRDESSCD+ NKLNISHECLSLIY KFLDEMAHL+SSGGINEIY
Sbjct: 332 NNLEDDSQYFELIGNSWRDESSCDDRNKLNISHECLSLIYTKFLDEMAHLRSSGGINEIY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRK GRKAGF SS EWWEGKS+LSKKLLL QLLETDVG  G+PPSFV+SCNAYKRRKEK+
Sbjct: 392 GRKLGRKAGFQSSTEWWEGKSQLSKKLLLHQLLETDVGLNGMPPSFVTSCNAYKRRKEKI 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAK RIQRIM PS+A  GDVN EK+RKRK A GIEWEDIIIETLLLH V+EEEIEKGHY
Sbjct: 452 NAAKNRIQRIMLPSNAAIGDVNAEKERKRKRAIGIEWEDIIIETLLLHDVKEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
           N LLDLHVF S
Sbjct: 512 NALLDLHVFGS 522

[Close]

BLAST of CmUC03G057580 vs. NCBI nr
Match: KAG6573303.1 (Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 861.7 bits (2225), Expect = 3.9e-246
Identity = 430/491 (87.58%), Postives = 459/491 (93.48%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNY+AQLGG+NGPQGTFVRVGTSGSGSVLNYKDKKI+EAQKIIEDITFRLGFSASKSN
Sbjct: 32  EFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKIIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYG GDWF ILVGAC+YVSMRKDNRPLPMSE+AS +ECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGQGDWFSILVGACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVL 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDLKGP FP FDIVGSLERAARNSPSFS+V+ADTL+ IVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLKGPAFPGFDIVGSLERAARNSPSFSKVEADTLDVIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS LNEV VSID+VAMEVHAKVSTCKKRYRELL ALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSGLNEVNVSIDDVAMEVHAKVSTCKKRYRELLGALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDIT +NIVKNAPFVIQYMELKSMSN  G+GK+ E+VGIDLQ+AVSECLRKEL+YESEV
Sbjct: 272 GKDITKRNIVKNAPFVIQYMELKSMSNTCGQGKNFEDVGIDLQAAVSECLRKELQYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFEL G+SWRDESSCD+ NKLNISHECLSLIY KFLDEMAHL+SSGGINEIY
Sbjct: 332 NNLEDDSQYFELIGNSWRDESSCDDRNKLNISHECLSLIYTKFLDEMAHLRSSGGINEIY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRK GRKAGF SS EWWEGKS+LSKKLLL QLLETD+G  G+PPSFV+SCNAYKRRKEK+
Sbjct: 392 GRKLGRKAGFQSSTEWWEGKSQLSKKLLLHQLLETDIGLNGMPPSFVTSCNAYKRRKEKI 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAK RIQRIM PS A  GDVN EK+RKRK A GIEWEDIIIETLLLH V+EEEIEKGHY
Sbjct: 452 NAAKNRIQRIMLPSHAAIGDVNAEKERKRKRAIGIEWEDIIIETLLLHDVKEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
           N LLDLHVF+S
Sbjct: 512 NALLDLHVFSS 522

[Close]

BLAST of CmUC03G057580 vs. ExPASy Swiss-Prot
Match: O81787 (Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF2 PE=1 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.5e-123
Identity = 242/505 (47.92%), Postives = 336/505 (66.53%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           E+DNYEAQLGGI GPQGT++RVGT G GSVL+YKDKKI+EA  +IE+ T RL    +K+ 
Sbjct: 30  EYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDYKDKKIYEANNLIEETTERLNL-GNKTE 89

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNR-PLPMSEIASAVECDLHELGRMV 243
            ++ ++S +T+GE+G G+WFPIL+GAC Y  +R++ +  L M E+A  V CDLH+LG M+
Sbjct: 90  VIKSMISKLTDGEFGQGEWFPILIGACCYAVVREEGKGVLSMEEVAYEVGCDLHQLGPMI 149

Query: 244 IRVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFL 303
            RVVD LDL   E   FD+VG   +   NSP  + VD D  E+I+KQG FL+ CA+KWFL
Sbjct: 150 KRVVDHLDL---ELREFDLVGLFTKTVTNSPRLTDVDRDKKEKIIKQGTFLMNCALKWFL 209

Query: 304 TTGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKK-- 363
           +TGR+P+P+V AVL  V ++N VKV ID++A +    ++TCK RY+EL E LV+V ++  
Sbjct: 210 STGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKDASVSLTTCKTRYKELSEKLVKVAEEVG 269

Query: 364 LPWGKDITTKNIVKNAPFVIQYMELKSM-SNASGKGKDLENV-GIDLQSAVSECLRKELE 423
           LPW KD+T KN++K++  +   ME KSM     G GK+L    G  ++  V +CL KE  
Sbjct: 270 LPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQGTGKELVRTDGFCVEDLVMDCLSKESM 329

Query: 424 YESEVNNLEDD-SQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMA----HL 483
           Y  + +  +D  S+YF+++G   R  S C+  +  NIS   LS  Y++F D +       
Sbjct: 330 YCYDDDARQDTMSRYFDVEGE--RQLSLCNYDD--NISENQLSTKYNEFEDRVCGGTLAK 389

Query: 484 KSSGGINEIYGRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSC 543
           +S G    ++ R+     G  S+  WW+GKSELSK+LLL+ LLE DVG + +PPS++  C
Sbjct: 390 RSQGSSQSMWQRRS--VFGMVSTENWWKGKSELSKRLLLKDLLEKDVGLEALPPSYIKGC 449

Query: 544 NAYKRRKEKVNAAKKRIQRIMHPS-SAPTGDVNTE---KKRKRKGANGIEWEDIIIETLL 603
            A +RR+EK+ AAK RI  I HPS +   G ++ E    K+KRK  + I+WED++I+TL+
Sbjct: 450 VAVERRREKIKAAKLRINAIQHPSDNVSEGALSLELEHSKKKRKKGSEIDWEDLVIQTLV 509

Query: 604 LHGVEEEEIEKGHYNVLLDLHVFNS 615
           LH V EEEIEKGHY  LLDLHVFNS
Sbjct: 510 LHNVNEEEIEKGHYKTLLDLHVFNS 524

[Close]

BLAST of CmUC03G057580 vs. ExPASy Swiss-Prot
Match: Q4R318 (Transcription factor IIIB 50 kDa subunit OS=Macaca fascicularis OX=9541 GN=BRF2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.0e-08
Identity = 44/188 (23.40%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 205 ILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVG- 264
           +LVG C  ++ R+ N PL M  I + +  DL     + +++V  L L  P   + ++V  
Sbjct: 116 VLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSIYMQIVKLLGLDMPSLCLAELVKT 175

Query: 265 --SLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL--- 324
             S  +  + SPS      +  E+++ + + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSVPAKYVEDKEKMLSRTLQLVELANETWLVTGRHPLPVITAATFLAWQ 235

Query: 325 -VSELNEVKVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIVK 383
            +   + +  S+       +  +      R +ELL  L+ + ++L W +   +  +++VK
Sbjct: 236 SLQPADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVK 295

[Close]

BLAST of CmUC03G057580 vs. ExPASy Swiss-Prot
Match: Q9HAW0 (Transcription factor IIIB 50 kDa subunit OS=Homo sapiens OX=9606 GN=BRF2 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-07
Identity = 44/190 (23.16%), Postives = 91/190 (47.89%), Query Frame = 0


Query: 205 ILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVG- 264
           +LVG C  ++ R+ N PL M  I + +  DL       +++V  L L  P   + ++V  
Sbjct: 116 VLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKT 175

Query: 265 --SLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL--- 324
             S  +  + SPS      +  E+++ + + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQ 235

Query: 325 -VSELNEVKVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIVK 384
            +   + +  S+       +  +      R +ELL  L+ + ++L W +   +  +++VK
Sbjct: 236 SLQPADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVK 295

[Close]

BLAST of CmUC03G057580 vs. ExPASy Swiss-Prot
Match: Q4V8D6 (Transcription factor IIIB 50 kDa subunit OS=Rattus norvegicus OX=10116 GN=Brf2 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-07
Identity = 43/191 (22.51%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 205 ILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGS 264
           ++VG C  ++ R+ N PL M  I + +  DL       +++V  L L  P   + D+V S
Sbjct: 116 VVVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLADLVKS 175

Query: 265 L---ERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL--- 324
                +  + SPS      +  ++++ + + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSMPAKYVEDKDKMLSRTLLLVELANETWLVTGRHPLPIITAATFLAWQ 235

Query: 325 -VSELNEVKVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIVK 384
            +   + +  S+       +  +      R +ELL  L+++  +L W +   +  +++VK
Sbjct: 236 SLRPSDRLTCSLARFCKLANVDLPYPAASRLQELLAVLLQMASQLAWLQVLRLDKRSVVK 295

Query: 385 NAPFVIQYMEL 386
           +   ++Q+  +
Sbjct: 296 HIGDLLQHRHM 306

[Close]

BLAST of CmUC03G057580 vs. ExPASy Swiss-Prot
Match: Q3UAW9 (Transcription factor IIIB 50 kDa subunit OS=Mus musculus OX=10090 GN=Brf2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-07
Identity = 44/191 (23.04%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 205 ILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGS 264
           +LVG C  ++ R+ N PL M  I + +  DL       +++V  L L  P   + D+V S
Sbjct: 116 VLVGCCVLITCRQHNWPLTMGTICTLLYADLDLFSGTYMQMVKLLGLDVPSLCLADLVKS 175

Query: 265 L---ERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL--- 324
                +  + SPS      +  ++++ + + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSVPAKYVEDKDKMLSRTLLLVELADETWLVTGRHPLPIITAATFLAWQ 235

Query: 325 -VSELNEVKVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIVK 384
            +   + +  S+       +  +      R +ELL  L+++  +L W +   +  +++VK
Sbjct: 236 SLRPSDRLTCSLAQFCKLANVDLPYPAASRLQELLAVLLQMAGQLAWLQVLKLNKRSVVK 295

Query: 385 NAPFVIQYMEL 386
           +   ++Q+  +
Sbjct: 296 HIGDLLQHRHM 306

[Close]

BLAST of CmUC03G057580 vs. ExPASy TrEMBL
Match: A0A5A7UMA0 (Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002190 PE=4 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 6.0e-261
Identity = 452/491 (92.06%), Postives = 476/491 (96.95%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EF+NYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKK++EAQK+IEDITFRLGFSASKSN
Sbjct: 32  EFENYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKVYEAQKVIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPL MSE+ASAVECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLSMSEVASAVECDLHELGRMVM 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDL+G EFPVFDIVGSLERAARNSPSFSR++AD LERIVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLRGSEFPVFDIVGSLERAARNSPSFSRLEADILERIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS+LNEV VS++NVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSKLNEVDVSMENVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV
Sbjct: 272 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFELQGS W DES+CDNGN+LNISHECLSLIY+KFLDEMA L+SSGGIN++Y
Sbjct: 332 NNLEDDSQYFELQGSRWCDESNCDNGNRLNISHECLSLIYNKFLDEMAELRSSGGINDVY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRKQGRKAGF SS EWWEGKS LSKKLLLQQLLETD+GSQGIPPSFVSSCNAYKRRKEKV
Sbjct: 392 GRKQGRKAGFYSSTEWWEGKSVLSKKLLLQQLLETDIGSQGIPPSFVSSCNAYKRRKEKV 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAKKRIQRIMHPS+AP GDVN +KKRKRKGA+ IEWEDIIIETLLLHGV+EEEIEKGHY
Sbjct: 452 NAAKKRIQRIMHPSNAPAGDVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
            VLLDLHVF S
Sbjct: 512 KVLLDLHVFTS 522

[Close]

BLAST of CmUC03G057580 vs. ExPASy TrEMBL
Match: A0A1S3B6X4 (transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826 PE=4 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 6.0e-261
Identity = 452/491 (92.06%), Postives = 476/491 (96.95%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EF+NYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKK++EAQK+IEDITFRLGFSASKSN
Sbjct: 32  EFENYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKVYEAQKVIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPL MSE+ASAVECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLSMSEVASAVECDLHELGRMVM 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDL+G EFPVFDIVGSLERAARNSPSFSR++AD LERIVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLRGSEFPVFDIVGSLERAARNSPSFSRLEADILERIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS+LNEV VS++NVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSKLNEVDVSMENVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV
Sbjct: 272 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFELQGS W DES+CDNGN+LNISHECLSLIY+KFLDEMA L+SSGGIN++Y
Sbjct: 332 NNLEDDSQYFELQGSRWCDESNCDNGNRLNISHECLSLIYNKFLDEMAELRSSGGINDVY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRKQGRKAGF SS EWWEGKS LSKKLLLQQLLETD+GSQGIPPSFVSSCNAYKRRKEKV
Sbjct: 392 GRKQGRKAGFYSSTEWWEGKSVLSKKLLLQQLLETDIGSQGIPPSFVSSCNAYKRRKEKV 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAKKRIQRIMHPS+AP GDVN +KKRKRKGA+ IEWEDIIIETLLLHGV+EEEIEKGHY
Sbjct: 452 NAAKKRIQRIMHPSNAPAGDVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
            VLLDLHVF S
Sbjct: 512 KVLLDLHVFTS 522

[Close]

BLAST of CmUC03G057580 vs. ExPASy TrEMBL
Match: A0A0A0M0A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1)

HSP 1 Score: 883.6 bits (2282), Expect = 4.6e-253
Identity = 442/491 (90.02%), Postives = 468/491 (95.32%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNY+AQLGGINGPQGTFVRVGTSGSGSVLNYKDKKI+EAQK+IEDITFRLGFSASKSN
Sbjct: 32  EFDNYDAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKVIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKD+RPL MSE+ASAVECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVM 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVV+FLDL+G EFPVFDIVGSLERAARNSPSFSR++AD LERIVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVEFLDLRGSEFPVFDIVGSLERAARNSPSFSRLEADILERIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS+LNEV VSI+NV MEVHA VSTCKKRYRELLEALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSKLNEVDVSIENVGMEVHANVSTCKKRYRELLEALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDITTKNIVKNAPFVIQYMELKSMS ASGKGKDLENV IDLQSAVSECLRKELEYESEV
Sbjct: 272 GKDITTKNIVKNAPFVIQYMELKSMSKASGKGKDLENVEIDLQSAVSECLRKELEYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
            NLEDDSQYFELQ S W+DES+ DNGN+LNISHECLSLIY+KFLDEMA L+SSGGINE+Y
Sbjct: 332 YNLEDDSQYFELQRSRWQDESNRDNGNRLNISHECLSLIYNKFLDEMAELRSSGGINEVY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           G KQGRK GF SS EWWEGKSELSKKLLLQQLLETD+GSQGIPPSFVSSCNAY+RRKEKV
Sbjct: 392 GTKQGRKTGFYSSTEWWEGKSELSKKLLLQQLLETDIGSQGIPPSFVSSCNAYERRKEKV 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAKKRIQRIMHPS+AP  DVN +KKRKRKGA+ IEWEDIIIETLLLHGV+EEEIEKGHY
Sbjct: 452 NAAKKRIQRIMHPSTAPADDVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
            VLLDL+VF S
Sbjct: 512 KVLLDLYVFTS 522

[Close]

BLAST of CmUC03G057580 vs. ExPASy TrEMBL
Match: A0A6J1GSR8 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC111457096 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 2.7e-245
Identity = 428/491 (87.17%), Postives = 458/491 (93.28%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNY+AQLGG+NGPQGTFVRVGTSGSGSVLNYKDKKI+EAQ IIEDITFRLGFSASKSN
Sbjct: 32  EFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNYKDKKIYEAQNIIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYG GDWF ILVGAC+YVSMRKDNRPLPMSE+AS +ECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGQGDWFSILVGACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVL 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDLKGP FP FDIVGSLERAARNSPSFS+V+ADTL+ IVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLKGPAFPGFDIVGSLERAARNSPSFSKVEADTLDVIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS LNEV VSID+VAMEVHAKVSTCKKRYRELL ALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSGLNEVNVSIDDVAMEVHAKVSTCKKRYRELLGALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDIT +NIVKNAPFVIQYMELKSMSN  G+GK+ E+VGIDLQ+AVSECLRKEL+YESEV
Sbjct: 272 GKDITKRNIVKNAPFVIQYMELKSMSNTCGRGKNFEDVGIDLQAAVSECLRKELQYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFEL G+SWRDESSCD+ NKLNISHECLSLIY KFLDEMAHL+SSGGINEIY
Sbjct: 332 NNLEDDSQYFELIGNSWRDESSCDDRNKLNISHECLSLIYTKFLDEMAHLRSSGGINEIY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRK GRKAGF SS EWWEGKS+LSKKLLL QLLETDVG  G+PPSFV+SCNAYKRRKEK+
Sbjct: 392 GRKLGRKAGFQSSTEWWEGKSQLSKKLLLHQLLETDVGLNGMPPSFVTSCNAYKRRKEKI 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAK RIQRIM PS+   G+VN EK+RKRK A GIEWEDIIIETLLLH V+EEEIEKGHY
Sbjct: 452 NAAKNRIQRIMLPSNTAIGNVNAEKERKRKRAIGIEWEDIIIETLLLHDVKEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
           N LLDLHVF+S
Sbjct: 512 NALLDLHVFSS 522

[Close]

BLAST of CmUC03G057580 vs. ExPASy TrEMBL
Match: A0A6J1JZD6 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC111490217 PE=4 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 4.6e-245
Identity = 429/491 (87.37%), Postives = 457/491 (93.08%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           EFDNY+AQLGG+NGPQGTFVRVGTSGSGSVLNYKDKKI+EAQKIIEDITFRLGFSASKSN
Sbjct: 32  EFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKIIEDITFRLGFSASKSN 91

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNRPLPMSEIASAVECDLHELGRMVI 243
           DVRILVSTITEGEYG GDWF ILVGAC+YVSMRKDNRPLPMSE+AS +ECDLHELGRMV+
Sbjct: 92  DVRILVSTITEGEYGQGDWFSILVGACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVL 151

Query: 244 RVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFLT 303
           RVVDFLDLKGP FP FDIVGSLERAARNSPSFS+V+ADTL+ IVKQGIFLLQCA+KWFLT
Sbjct: 152 RVVDFLDLKGPAFPGFDIVGSLERAARNSPSFSKVEADTLDIIVKQGIFLLQCAMKWFLT 211

Query: 304 TGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKKLPW 363
           TGRQPLPMVAAVLVLVS LNEV VSID+VAMEVHAKVSTCKKRYRELL ALVEVGKKLPW
Sbjct: 212 TGRQPLPMVAAVLVLVSGLNEVNVSIDDVAMEVHAKVSTCKKRYRELLGALVEVGKKLPW 271

Query: 364 GKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEV 423
           GKDIT +NIVKNAPFVIQYMELKSMSN  G+GK+ E+VGIDLQ+AVSECLRKEL+YESEV
Sbjct: 272 GKDITKRNIVKNAPFVIQYMELKSMSNTCGQGKNFEDVGIDLQAAVSECLRKELQYESEV 331

Query: 424 NNLEDDSQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMAHLKSSGGINEIY 483
           NNLEDDSQYFEL G+SW DESSCD+ NKLNISHECLSLIY KFLDEMAHL+SSG INEIY
Sbjct: 332 NNLEDDSQYFELIGNSWHDESSCDDRNKLNISHECLSLIYTKFLDEMAHLRSSGEINEIY 391

Query: 484 GRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSCNAYKRRKEKV 543
           GRK GRKAGF SS EWWEGKS+LSKKLLL QLLETDVG  G+PPSFV+SCNAYKRRKEK+
Sbjct: 392 GRKLGRKAGFQSSTEWWEGKSQLSKKLLLHQLLETDVGLNGMPPSFVTSCNAYKRRKEKI 451

Query: 544 NAAKKRIQRIMHPSSAPTGDVNTEKKRKRKGANGIEWEDIIIETLLLHGVEEEEIEKGHY 603
           NAAK RIQRIM PS A  GDVN EK+RKRK A GIEWEDIIIETLLLH V+EEEIEKGHY
Sbjct: 452 NAAKNRIQRIMLPSHAAIGDVNAEKERKRKRAVGIEWEDIIIETLLLHDVKEEEIEKGHY 511

Query: 604 NVLLDLHVFNS 615
           N LLDLHVF+S
Sbjct: 512 NALLDLHVFSS 522

[Close]

BLAST of CmUC03G057580 vs. TAIR 10
Match: AT4G35540.1 (zinc ion binding;transcription regulators )

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-124
Identity = 242/505 (47.92%), Postives = 336/505 (66.53%), Query Frame = 0


Query: 124 EFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIFEAQKIIEDITFRLGFSASKSN 183
           E+DNYEAQLGGI GPQGT++RVGT G GSVL+YKDKKI+EA  +IE+ T RL    +K+ 
Sbjct: 30  EYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDYKDKKIYEANNLIEETTERLNL-GNKTE 89

Query: 184 DVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDNR-PLPMSEIASAVECDLHELGRMV 243
            ++ ++S +T+GE+G G+WFPIL+GAC Y  +R++ +  L M E+A  V CDLH+LG M+
Sbjct: 90  VIKSMISKLTDGEFGQGEWFPILIGACCYAVVREEGKGVLSMEEVAYEVGCDLHQLGPMI 149

Query: 244 IRVVDFLDLKGPEFPVFDIVGSLERAARNSPSFSRVDADTLERIVKQGIFLLQCAVKWFL 303
            RVVD LDL   E   FD+VG   +   NSP  + VD D  E+I+KQG FL+ CA+KWFL
Sbjct: 150 KRVVDHLDL---ELREFDLVGLFTKTVTNSPRLTDVDRDKKEKIIKQGTFLMNCALKWFL 209

Query: 304 TTGRQPLPMVAAVLVLVSELNEVKVSIDNVAMEVHAKVSTCKKRYRELLEALVEVGKK-- 363
           +TGR+P+P+V AVL  V ++N VKV ID++A +    ++TCK RY+EL E LV+V ++  
Sbjct: 210 STGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKDASVSLTTCKTRYKELSEKLVKVAEEVG 269

Query: 364 LPWGKDITTKNIVKNAPFVIQYMELKSM-SNASGKGKDLENV-GIDLQSAVSECLRKELE 423
           LPW KD+T KN++K++  +   ME KSM     G GK+L    G  ++  V +CL KE  
Sbjct: 270 LPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQGTGKELVRTDGFCVEDLVMDCLSKESM 329

Query: 424 YESEVNNLEDD-SQYFELQGSSWRDESSCDNGNKLNISHECLSLIYHKFLDEMA----HL 483
           Y  + +  +D  S+YF+++G   R  S C+  +  NIS   LS  Y++F D +       
Sbjct: 330 YCYDDDARQDTMSRYFDVEGE--RQLSLCNYDD--NISENQLSTKYNEFEDRVCGGTLAK 389

Query: 484 KSSGGINEIYGRKQGRKAGFCSSAEWWEGKSELSKKLLLQQLLETDVGSQGIPPSFVSSC 543
           +S G    ++ R+     G  S+  WW+GKSELSK+LLL+ LLE DVG + +PPS++  C
Sbjct: 390 RSQGSSQSMWQRRS--VFGMVSTENWWKGKSELSKRLLLKDLLEKDVGLEALPPSYIKGC 449

Query: 544 NAYKRRKEKVNAAKKRIQRIMHPS-SAPTGDVNTE---KKRKRKGANGIEWEDIIIETLL 603
            A +RR+EK+ AAK RI  I HPS +   G ++ E    K+KRK  + I+WED++I+TL+
Sbjct: 450 VAVERRREKIKAAKLRINAIQHPSDNVSEGALSLELEHSKKKRKKGSEIDWEDLVIQTLV 509

Query: 604 LHGVEEEEIEKGHYNVLLDLHVFNS 615
           LH V EEEIEKGHY  LLDLHVFNS
Sbjct: 510 LHNVNEEEIEKGHYKTLLDLHVFNS 524

The following BLAST results are available for this feature:

BLAST of CmUC03G057580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893651.1	5.2e-267	94.90	plant-specific TFIIB-related protein PTF2 [Benincasa hispida]	[more]
XP_008443157.1	1.2e-260	92.06	PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo] >KAA0057033.1...	[more]
XP_004149065.1	9.5e-253	90.02	plant-specific TFIIB-related protein PTF2 [Cucumis sativus] >KGN65641.1 hypothet...	[more]
XP_023542889.1	1.7e-246	87.78	plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo]	[more]
KAG6573303.1	3.9e-246	87.58	Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CmUC03G057580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81787	2.5e-123	47.92	Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF...	[more]
Q4R318	6.0e-08	23.40	Transcription factor IIIB 50 kDa subunit OS=Macaca fascicularis OX=9541 GN=BRF2 ...	[more]
Q9HAW0	1.0e-07	23.16	Transcription factor IIIB 50 kDa subunit OS=Homo sapiens OX=9606 GN=BRF2 PE=1 SV...	[more]
Q4V8D6	1.0e-07	22.51	Transcription factor IIIB 50 kDa subunit OS=Rattus norvegicus OX=10116 GN=Brf2 P...	[more]
Q3UAW9	1.8e-07	23.04	Transcription factor IIIB 50 kDa subunit OS=Mus musculus OX=10090 GN=Brf2 PE=1 S...	[more]

BLAST of CmUC03G057580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMA0	6.0e-261	92.06	Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B6X4	6.0e-261	92.06	transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826...	[more]
A0A0A0M0A0	4.6e-253	90.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1	[more]
A0A6J1GSR8	2.7e-245	87.17	plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JZD6	4.6e-245	87.37	plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CmUC03G057580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35540.1	1.8e-124	47.92	zinc ion binding;transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 409..429
None	No IPR available	GENE3D	1.10.472.170		coord: 103..246 e-value: 2.2E-7 score: 33.0
None	No IPR available	GENE3D	1.10.472.10		coord: 276..357 e-value: 6.3E-8 score: 34.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 554..573
None	No IPR available	PANTHER	PTHR11618:SF13	TRANSCRIPTION INITIATION FACTOR IIB	coord: 155..389
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 155..389
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 164..254
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 286..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G057580.1	CmUC03G057580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070897	transcription preinitiation complex assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0097550	transcription preinitiation complex
molecular_function	GO:0017025	TBP-class protein binding