CmUC03G056840 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G056840
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S ribosomal protein L18a
Location	CmU531Chr03: 7587647 .. 7590551 (-)
RNA-Seq Expression	CmUC03G056840
Synteny	CmUC03G056840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCGCCTCAGTAATCAGTTGGGAAGAGAGAGATCGTTTACAGAGACATCTACGGCTTCTCTTTTCCTCCAAGATGGTGACTTTCAGGGTAAGACGTGATGTTTGTTCTTAGATCTCTTGTTTTTTTTTCTGTCTAATGGATGATACGGAGGCCGTCAACAAAGTGTTTCCCTCTATACTAGGATGAATTTTTTCTACTTTCATTTGCCAGGATATTGGGCATTGAATATGTAATTTTATGATTCATGTATTTGATTTTCTTGTCTATCGTCAACGATTTGAAATGCGATTTTATTTTTACCACATTTTTATTGCTTATTTTCTTCAGCATCAAAATTGGGGGGATTGAAGGTTTGTTGAATTTGAATTAATGTCTTTTGGTTTTGTTTTGCAGTTCCACCAATACCAGGTTGTGGGAAGGGCTCTTCCATCTGAATCAGATGAACACCCTAAGATTTACAGAATGAAGCTCTGGGCCACGAATGAGGTCCGAGCTAAGTCCAAGTTCTGGTGAGTTTCCAGTTGGAAATGCTAATGCGTTTGACTTTAGTGTAGCTTTTGGGTCGAGTTGTTCAATTGTTTCAACTTGTCTTATTGTTCCCAATCAGGTACTTTTTGAGGAAGTTGAAGAAGGTCAAGAAGAGTAATGGACAAGTGCTTGCTATTAATGAGGTAATTCATGCGTGGGATAATGAAATTTACTCTTATTTTTTGTCTGAAGCTAATGATCTTTCGATTTTATTTCCATGAACTATTAGCTTCTTGAAAATGTAATCTCTTATTGTTAAGAGGGAAAAATCACAAATATTGTGTTTGTCCATTTAGTTAATTAGTGGTTGTCAATTGTGTTTTTATATTTTAAATGTAGAGATAGCGAAGGTTTTCTTGTGTTAGTTCTTGACCTGTTTAAATGAATGTGTAATTAGCCAAGTGCTCATGTTTTTCTGATGATAATTGAAATTTTCACTTAGGAAGCATACCAATTTTGCTGGTATCAATGTTTTTAGATGAGTACTATTTGTACTCTTATGTAAATTGCTTAAAATAAAGTGCATGTTGAAACATGCAGATGGGGGTGACATTGGGATTTAAATATCTTTGTTGGCCGCTACATTTTGGAGATGTTATTTGATTCTTCCTCAGTTAAGAGAATAAGAAGCTATTTGTATACCGAGGTCTTAATGAAGGTAAGAAAAGAAAATGGGCAAAGGTGAGGAAAAAGAAGGAAATAAGTTATAGTGAAGTTCTTTGTAGATTTGAGTCTACATGTTGGCAGGAGGAGGAGGGTCTTGACCATCTTTTGTGGGGCTATCAATTTGCTTCTTCGACTGGAGTTGGTATTTCAAGGTGGTTGGGGTGTGTTATAAAGACTGTTGCTATATGATGGAGGAGATTCTAATGAACTCTCTTTCATGGTAAATGACGAGTCTTGTGGAAGACTTGTAATTTAGCTATTTTGTGAGGTTGACTTGAGAGGTATAGTGAAATTTTTAAAGGGTTGGAGAGGTCTAGTGTGGGAGGTTGTGAGGTTTGATTCATCTTTATGGGCGTTTTTTAATTAATCTTTGTGCAATTATCAGCTTGGTGTAGTTCTTTTGGATTGAAATCTCATGGGCTGATATTGCAAAAAACATCCCCTTCTTTGATCGGTTTGTAAGATTCAAAGCTGGGGGTGGTGAGAATATTCATTTCTGCGAAGACATTTGGATAAAGCACCTCCCCTTGAAGGTTGTTTTCCCTAGCATTTACTCTATTTCCTACAAAGAAGAAGAAGAAGAAGAAGAAGAAGCCTACATGGCTGATGGCTGGGATAATAACCCGACCTGGATTTTGGGCTTGGATTGGCTGTTGGAAGAACTTGTTCCTTGGAATTTGAAGAAGCTAAGGTGGTGGCTAGCCGTGCCTTTAGAGCTATCTTGTGGCACATTTGGAAGGGGAAAGAAATGCTAGATCTTTTGAAAATAAGTCCTCCCCTTCCTCTAGTACTTTTACCTTTTGTAACCTTGTACATAACGGCATCTTGGTGGATAGCTTAACGCAAGAATTTCGTTTGTAATTACAGCTTTTTGATGATTATTAGTGATTGAAAGCTTTGGCCGGAGGGTCCACTATCTTTTCCTCTAGGAGTCTTGCCTCAAGGCATAAGCCTGAAAAACCTTTTAAAACATCAACTTGTGCATTTGATTGGTAAATTTGTGGGTTTTAATACTCAATCCCGCAGCATAATTTGCAGCATAATGCCTCATGTGCCTCAGTTAAATTCCTTTTAGTTCGTTCTGAAATATCTTCAATTTGATTTCCTTGCAGATCTTTGAGAAGAATCCTACCAAAATCAAGAACTATGGCATCTGGCTGCGGTACCAAAGCCGAACTGGGTACCATAACATGTACAAGGAATATCGTGACACCACTCTCAATGGCGCTGTGGAACAAATGTACAACGAGATGGCTTCTCGACACAGGGTGAGACATCCATGCATCCAAATCATTAAAACTGCCACTGTTCCTGCTAAGCTGTGCAAAAGGGAAAGCACCAAACAATTCCATGATTCCAAGATCAAATTCCCTTTGGTGTTCAAGAAGGTTAGACCCCCAACCAGGAAGCTGAAGACCACTTACAAGGCCTCAAGACCCAATCTATTCATGTAAACTCTTCCTTCTCTATCCCCTGAGCAAAGATGGATTAGAGTTTTTGGTTTAAAACTTGAAATTTTTGGTAGATTTTAATATTTCACTTCCTTTGTTAGCAATGAATGTTCTAATTTTTAATCGAGGAACTCAAATTTTGCTTTGGATTTTTCTTTTTCCTGCTCATTCCTGGAACTGCTTTGACTTTATATGAAGTGCAATTGTTATGTTTAATTGGGCATATTTTAAATATATGAACTAATTATGATTCATGAGG

mRNA sequence

CCGCGCCTCAGTAATCAGTTGGGAAGAGAGAGATCGTTTACAGAGACATCTACGGCTTCTCTTTTCCTCCAAGATGGTGACTTTCAGGTTCCACCAATACCAGGTTGTGGGAAGGGCTCTTCCATCTGAATCAGATGAACACCCTAAGATTTACAGAATGAAGCTCTGGGCCACGAATGAGGTCCGAGCTAAGTCCAAGTTCTGGTACTTTTTGAGGAAGTTGAAGAAGGTCAAGAAGAGTAATGGACAAGTGCTTGCTATTAATGAGGAGGAGGAGGGTCTTGACCATCTTTTGTGGGGCTATCAATTTGCTTCTTCGACTGGAGTTGGTATTTCAAGCTATTTTTTCTTTTGGATTGAAATCTCATGGGCTGATATTGCAAAAAACATCCCCTTCTTTGATCGGTTTGTAAGATTCAAAGCTGGGGGTGGTGAGAATATTCATTTCTGCGAAGACATTTGGATAAAGCACCTCCCCTTGAAGATCTTTGAGAAGAATCCTACCAAAATCAAGAACTATGGCATCTGGCTGCGGTACCAAAGCCGAACTGGGTACCATAACATGTACAAGGAATATCGTGACACCACTCTCAATGGCGCTGTGGAACAAATGTACAACGAGATGGCTTCTCGACACAGGGTGAGACATCCATGCATCCAAATCATTAAAACTGCCACTGTTCCTGCTAAGCTGTGCAAAAGGGAAAGCACCAAACAATTCCATGATTCCAAGATCAAATTCCCTTTGGTGTTCAAGAAGGTTAGACCCCCAACCAGGAAGCTGAAGACCACTTACAAGGCCTCAAGACCCAATCTATTCATGTAAACTCTTCCTTCTCTATCCCCTGAGCAAAGATGGATTAGAGTTTTTGGTTTAAAACTTGAAATTTTTGGTAGATTTTAATATTTCACTTCCTTTGTTAGCAATGAATGTTCTAATTTTTAATCGAGGAACTCAAATTTTGCTTTGGATTTTTCTTTTTCCTGCTCATTCCTGGAACTGCTTTGACTTTATATGAAGTGCAATTGTTATGTTTAATTGGGCATATTTTAAATATATGAACTAATTATGATTCATGAGG

Coding sequence (CDS)

ATGGTGACTTTCAGGTTCCACCAATACCAGGTTGTGGGAAGGGCTCTTCCATCTGAATCAGATGAACACCCTAAGATTTACAGAATGAAGCTCTGGGCCACGAATGAGGTCCGAGCTAAGTCCAAGTTCTGGTACTTTTTGAGGAAGTTGAAGAAGGTCAAGAAGAGTAATGGACAAGTGCTTGCTATTAATGAGGAGGAGGAGGGTCTTGACCATCTTTTGTGGGGCTATCAATTTGCTTCTTCGACTGGAGTTGGTATTTCAAGCTATTTTTTCTTTTGGATTGAAATCTCATGGGCTGATATTGCAAAAAACATCCCCTTCTTTGATCGGTTTGTAAGATTCAAAGCTGGGGGTGGTGAGAATATTCATTTCTGCGAAGACATTTGGATAAAGCACCTCCCCTTGAAGATCTTTGAGAAGAATCCTACCAAAATCAAGAACTATGGCATCTGGCTGCGGTACCAAAGCCGAACTGGGTACCATAACATGTACAAGGAATATCGTGACACCACTCTCAATGGCGCTGTGGAACAAATGTACAACGAGATGGCTTCTCGACACAGGGTGAGACATCCATGCATCCAAATCATTAAAACTGCCACTGTTCCTGCTAAGCTGTGCAAAAGGGAAAGCACCAAACAATTCCATGATTCCAAGATCAAATTCCCTTTGGTGTTCAAGAAGGTTAGACCCCCAACCAGGAAGCTGAAGACCACTTACAAGGCCTCAAGACCCAATCTATTCATGTAA

Protein sequence

MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGGENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM

Homology

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BLAST of CmUC03G056840 vs. NCBI nr
Match: XP_038895722.1 (60S ribosomal protein L18a [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 3.0e-88
Identity = 178/250 (71.20%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT
Sbjct: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           YKASRPNLFM
Sbjct: 241 YKASRPNLFM 178

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BLAST of CmUC03G056840 vs. NCBI nr
Match: XP_022927633.1 (60S ribosomal protein L18a-like [Cucurbita moschata] >XP_023001472.1 60S ribosomal protein L18a-like [Cucurbita maxima] >XP_023519007.1 60S ribosomal protein L18a-like [Cucurbita pepo subsp. pepo] >KAG7019530.1 60S ribosomal protein L18a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333.6 bits (854), Expect = 1.5e-87
Identity = 176/250 (70.40%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTT
Sbjct: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTT 178

Query: 241 YKASRPNLFM 251
           YKAS+PNLFM
Sbjct: 241 YKASKPNLFM 178

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BLAST of CmUC03G056840 vs. NCBI nr
Match: KAG6583916.1 (60S ribosomal protein L18a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.0 bits (850), Expect = 4.4e-87
Identity = 175/250 (70.00%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTT
Sbjct: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTT 178

Query: 241 YKASRPNLFM 251
           YKAS+PNLF+
Sbjct: 241 YKASKPNLFI 178

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BLAST of CmUC03G056840 vs. NCBI nr
Match: KAF9682836.1 (hypothetical protein SADUNF_Sadunf05G0149600 [Salix dunnii])

HSP 1 Score: 330.1 bits (845), Expect = 1.7e-86
Identity = 182/273 (66.67%), Postives = 199/273 (72.89%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MV FRFHQYQVVGRALP+E+D+HPKIYRMKLWATNEVR+KSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVAFRFHQYQVVGRALPTENDDHPKIYRMKLWATNEVRSKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINE----EEEGLDHLLWGYQFASST--------GVGISSYFFFWIEISWADIAKN--- 120
           LAINE        L  L W +  A +          V I  Y   WI  S  +   +   
Sbjct: 61  LAINEVCVIRHALLVVLSWHHFLALNVEGFLGKVITVLILCYLPTWISCSNLNCTFSLIE 120

Query: 121 ----IPFFDRFVRFKAGGGENIHFCEDIWIKHL--PLK--IFEKNPTKIKNYGIWLRYQS 180
               +  +   V+          F   I +  L   LK  IFEKNPTKIKN+GIWLRYQS
Sbjct: 121 GKSILAGYSTLVKVSVDNLFQYFFVIRILVLGLGGSLKGNIFEKNPTKIKNFGIWLRYQS 180

Query: 181 RTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFH 240
           RTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR PCIQIIKTAT+PAKLCKRESTKQFH
Sbjct: 181 RTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFH 240

Query: 241 DSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 251
           +SKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 241 NSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 273

[Close]

BLAST of CmUC03G056840 vs. NCBI nr
Match: XP_038880985.1 (60S ribosomal protein L18a [Benincasa hispida])

HSP 1 Score: 328.9 bits (842), Expect = 3.7e-86
Identity = 174/250 (69.60%), Postives = 176/250 (70.40%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE M
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVF+ VRPPTRKLKTT
Sbjct: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           YKASRPNLFM
Sbjct: 241 YKASRPNLFM 178

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BLAST of CmUC03G056840 vs. ExPASy Swiss-Prot
Match: Q9ATF5 (60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.7e-84
Identity = 165/250 (66.00%), Postives = 173/250 (69.20%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGR LPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR PCIQIIKTAT+PAKLCKRES+KQFH+SKIKFPLV +K+RPP+RKLKT 
Sbjct: 181 YIEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTH 178

Query: 241 YKASRPNLFM 251
           YKASRPNLFM
Sbjct: 241 YKASRPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy Swiss-Prot
Match: P51418 (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-81
Identity = 161/250 (64.40%), Postives = 170/250 (68.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            I+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTT
Sbjct: 181 YTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTT 178

Query: 241 YKASRPNLFM 251
           YKA++PNLFM
Sbjct: 241 YKANKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy Swiss-Prot
Match: Q9LUD4 (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.3e-81
Identity = 159/247 (64.37%), Postives = 167/247 (67.61%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63
           FRFHQYQVVGRALP+E+DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGGENI 123
           NE                                                          
Sbjct: 64  NE---------------------------------------------------------- 123

Query: 124 HFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNE 183
                         IFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMY E
Sbjct: 124 --------------IFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTE 178

Query: 184 MASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKA 243
           MASRHRVR PCIQIIKTATVPAKLCKRE TKQFH+SKIKFPLVF+KVRPP+RKLKTTYKA
Sbjct: 184 MASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKA 178

Query: 244 SRPNLFM 251
           S+PNLFM
Sbjct: 244 SKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy Swiss-Prot
Match: Q943F3 (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-80
Identity = 159/250 (63.60%), Postives = 167/250 (66.80%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGR LP+ +DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR PCIQIIKTATV  KLCKR++TKQFH S IKFPLV++KVRPPTRKLKTT
Sbjct: 181 YTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           +KASRPNLFM
Sbjct: 241 FKASRPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy Swiss-Prot
Match: Q8L7K0 (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-78
Identity = 156/250 (62.40%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT
Sbjct: 181 YTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           +KA++PNLFM
Sbjct: 241 FKANKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy TrEMBL
Match: A0A6J1KGM6 (60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111495598 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.3e-88
Identity = 176/250 (70.40%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTT
Sbjct: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTT 178

Query: 241 YKASRPNLFM 251
           YKAS+PNLFM
Sbjct: 241 YKASKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy TrEMBL
Match: A0A6J1ELJ5 (60S ribosomal protein L18a OS=Cucurbita moschata OX=3662 GN=LOC111434402 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.3e-88
Identity = 176/250 (70.40%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTT
Sbjct: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTT 178

Query: 241 YKASRPNLFM 251
           YKAS+PNLFM
Sbjct: 241 YKASKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy TrEMBL
Match: A0A6J1C128 (aspartyl protease family protein 2-like OS=Momordica charantia OX=3673 GN=LOC111007387 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.3e-86
Identity = 174/250 (69.60%), Postives = 177/250 (70.80%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 595 MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 654

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 655 LAINE------------------------------------------------------- 714

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 715 -----------------IFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 772

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR+PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT
Sbjct: 775 YIEMASRHRVRYPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 772

Query: 241 YKASRPNLFM 251
           YKASRPNLFM
Sbjct: 835 YKASRPNLFM 772

[Close]

BLAST of CmUC03G056840 vs. ExPASy TrEMBL
Match: A0A6J1KRT5 (60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111496677 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.0e-86
Identity = 174/250 (69.60%), Postives = 175/250 (70.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE M
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVF+ VRPPTRKLKTT
Sbjct: 181 YTEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           YKASRPNLFM
Sbjct: 241 YKASRPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. ExPASy TrEMBL
Match: A0A0A0KIJ4 (60S ribosomal protein L18a OS=Cucumis sativus OX=3659 GN=Csa_6G522810 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.0e-86
Identity = 174/250 (69.60%), Postives = 175/250 (70.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE M
Sbjct: 121 -----------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFK VRPPTRKLKTT
Sbjct: 181 YTEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKTVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           YKASRPNLFM
Sbjct: 241 YKASRPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. TAIR 10
Match: AT2G34480.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-82
Identity = 161/250 (64.40%), Postives = 170/250 (68.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            I+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTT
Sbjct: 181 YTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTT 178

Query: 241 YKASRPNLFM 251
           YKA++PNLFM
Sbjct: 241 YKANKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. TAIR 10
Match: AT3G14600.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 301.6 bits (771), Expect = 5.9e-82
Identity = 159/247 (64.37%), Postives = 167/247 (67.61%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63
           FRFHQYQVVGRALP+E+DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGGENI 123
           NE                                                          
Sbjct: 64  NE---------------------------------------------------------- 123

Query: 124 HFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNE 183
                         IFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMY E
Sbjct: 124 --------------IFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTE 178

Query: 184 MASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKA 243
           MASRHRVR PCIQIIKTATVPAKLCKRE TKQFH+SKIKFPLVF+KVRPP+RKLKTTYKA
Sbjct: 184 MASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKA 178

Query: 244 SRPNLFM 251
           S+PNLFM
Sbjct: 244 SKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. TAIR 10
Match: AT1G29965.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 294.3 bits (752), Expect = 9.4e-80
Identity = 156/250 (62.40%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEEEEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGG 120
           LAINE                                                       
Sbjct: 61  LAINE------------------------------------------------------- 120

Query: 121 ENIHFCEDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 180
                            IFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM
Sbjct: 121 -----------------IFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 178

Query: 181 YNEMASRHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTT 240
           Y EMASRHRVR PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT
Sbjct: 181 YTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT 178

Query: 241 YKASRPNLFM 251
           +KA++PNLFM
Sbjct: 241 FKANKPNLFM 178

[Close]

BLAST of CmUC03G056840 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-78
Identity = 154/244 (63.11%), Postives = 164/244 (67.21%), Query Frame = 0


Query: 7   HQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEE 66
           HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+LAINE 
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINE- 200

Query: 67  EEGLDHLLWGYQFASSTGVGISSYFFFWIEISWADIAKNIPFFDRFVRFKAGGGENIHFC 126
                                                                       
Sbjct: 201 ------------------------------------------------------------ 260

Query: 127 EDIWIKHLPLKIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMAS 186
                      IFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMAS
Sbjct: 261 -----------IFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMAS 312

Query: 187 RHRVRHPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRP 246
           RHRVR PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA++P
Sbjct: 321 RHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKP 312

Query: 247 NLFM 251
           NLFM
Sbjct: 381 NLFM 312

The following BLAST results are available for this feature:

BLAST of CmUC03G056840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895722.1	3.0e-88	71.20	60S ribosomal protein L18a [Benincasa hispida]	[more]
XP_022927633.1	1.5e-87	70.40	60S ribosomal protein L18a-like [Cucurbita moschata] >XP_023001472.1 60S ribosom...	[more]
KAG6583916.1	4.4e-87	70.00	60S ribosomal protein L18a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAF9682836.1	1.7e-86	66.67	hypothetical protein SADUNF_Sadunf05G0149600 [Salix dunnii]	[more]
XP_038880985.1	3.7e-86	69.60	60S ribosomal protein L18a [Benincasa hispida]	[more]

BLAST of CmUC03G056840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATF5	4.7e-84	66.00	60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1	[more]
P51418	1.7e-81	64.40	60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=...	[more]
Q9LUD4	8.3e-81	64.37	60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=...	[more]
Q943F3	3.1e-80	63.60	60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE...	[more]
Q8L7K0	1.3e-78	62.40	60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=...	[more]

BLAST of CmUC03G056840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGM6	7.3e-88	70.40	60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111495598 PE=3 SV=1	[more]
A0A6J1ELJ5	7.3e-88	70.40	60S ribosomal protein L18a OS=Cucurbita moschata OX=3662 GN=LOC111434402 PE=3 SV...	[more]
A0A6J1C128	2.3e-86	69.60	aspartyl protease family protein 2-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KRT5	4.0e-86	69.60	60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111496677 PE=3 SV=1	[more]
A0A0A0KIJ4	4.0e-86	69.60	60S ribosomal protein L18a OS=Cucumis sativus OX=3659 GN=Csa_6G522810 PE=3 SV=1	[more]

BLAST of CmUC03G056840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34480.1	1.2e-82	64.40	Ribosomal protein L18ae/LX family protein	[more]
AT3G14600.1	5.9e-82	64.37	Ribosomal protein L18ae/LX family protein	[more]
AT1G29965.1	9.4e-80	62.40	Ribosomal protein L18ae/LX family protein	[more]
AT1G29970.2	1.0e-78	63.11	60S ribosomal protein L18A-1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.10		coord: 1..69 e-value: 5.4E-35 score: 121.1
None	No IPR available	GENE3D	3.10.20.10		coord: 144..219 e-value: 3.2E-42 score: 144.7
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 138..209
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 1..65 coord: 210..250
None	No IPR available	SUPERFAMILY	160374	RplX-like	coord: 143..218
IPR023573	Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A	PFAM	PF01775	Ribosomal_L18A	coord: 137..200 e-value: 3.7E-28 score: 98.0 coord: 7..67 e-value: 4.8E-20 score: 71.9
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 138..209 coord: 210..250
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 1..65
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	HAMAP	MF_00273	Ribosomal_L18Ae	coord: 6..69 score: 22.643353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G056840.1	CmUC03G056840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003735	structural constituent of ribosome