Homology
BLAST of CmUC03G056410 vs. NCBI nr
Match:
XP_038894029.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 646/717 (90.10%), Postives = 673/717 (93.86%), Query Frame = 0
Query: 1 MLHLQRSKP-----IFPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPT 60
MLHLQRSKP IFPNFPATQSRLLNTLSFLF+RCSS QHL QIHARF+LHGFHQNPT
Sbjct: 34 MLHLQRSKPVIHSLIFPNFPATQSRLLNTLSFLFDRCSSRQHLKQIHARFVLHGFHQNPT 93
Query: 61 LSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANS 120
LSS+LID YANLGLLNLSLQVFYSI PNST+YNAILRNLTRYGECERTLLVY+QMVA S
Sbjct: 94 LSSKLIDCYANLGLLNLSLQVFYSITEPNSTIYNAILRNLTRYGECERTLLVYRQMVAKS 153
Query: 121 MHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAH 180
MHPDEETYPSVLRS CSFSNV GRKIHGYLVKLGFDSFD+VATAL EMYEECIDFE+AH
Sbjct: 154 MHPDEETYPSVLRSCCSFSNVGSGRKIHGYLVKLGFDSFDMVATALGEMYEECIDFESAH 213
Query: 181 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 240
QL DKRSVK++ECWSSFTTE PQNGNGEGIF +F RMR EQLV DSLTFINLLR IA N
Sbjct: 214 QLFDKRSVKDLECWSSFTTEAPQNGNGEGIFGVFGRMRVEQLVTDSLTFINLLRFIAGFN 273
Query: 241 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 300
SI+LAKIVHCIAIVSKLCGDLLVNTAVLSLYSKL SLVDARKLFDKM + DRVVWNIMIA
Sbjct: 274 SIQLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLGSLVDARKLFDKMPENDRVVWNIMIA 333
Query: 301 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 360
AYAR+GK TECL LFKSMARSGIRSDMFTAL VISSISQLK DWGKQTHA+ILRNG+DS
Sbjct: 334 AYAREGKPTECLALFKSMARSGIRSDMFTALPVISSISQLKYFDWGKQTHAYILRNGSDS 393
Query: 361 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 420
Q+SV+NSLIDMYCECN+LDSACKIFNWM DKTVISWSAMIKGY KHG SLIALSLFS MK
Sbjct: 394 QVSVYNSLIDMYCECNILDSACKIFNWMKDKTVISWSAMIKGYVKHGHSLIALSLFSSMK 453
Query: 421 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 480
SDGIQ+DFIT INILPA VHIGVLENVKYLHGY+MKLGLTSL SLNTALLITYAKCGC+E
Sbjct: 454 SDGIQSDFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 513
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 540
MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSN+KPDQVTFLGLLTA
Sbjct: 514 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 573
Query: 541 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLV +GKEF KEMTE YGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR
Sbjct: 574 CVNSGLVEKGKEFLKEMTENYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 633
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKLHPGSKLAEFAAEKL+DMEPKNAGNYILLSNIYAAAGKWD VAKMRSFLR
Sbjct: 634 VWGPLLSACKLHPGSKLAEFAAEKLVDMEPKNAGNYILLSNIYAAAGKWDEVAKMRSFLR 693
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKL 713
DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL NLELEIKEAREK+++KL
Sbjct: 694 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEAREKSLEKL 750
BLAST of CmUC03G056410 vs. NCBI nr
Match:
XP_008444579.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucumis melo] >KAA0054005.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20690.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 616/718 (85.79%), Postives = 654/718 (91.09%), Query Frame = 0
Query: 1 MLHLQRSKPIFP-----NFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPT 60
MLHLQRSKPI NFPATQSRLLNTLS LFNRC+S QHL QIHARF+LHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANS 120
LSS+LID YANLGLL SLQVF SI PN TL+NAILRNLTRYGE ER LLVYQQMVA S
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAH 180
MHPDEETYP + RS SFSNV FGR IHGYLVKLGFDSFD+VATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 240
QL DKRSVK++ SS TTE QNGNGEGIFR+F RMRAEQLV DSLTF+NLLR IA LN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 300
SI+LAKIVHCIAIVSKL GDLLV TAVLSLYSKLRSLVDAR+LFDKM +KDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 360
AYAR+GK ECLELFKSMARSGIRSD+FTAL VISSI+QLKCVDWGKQTHAHILRNG+DS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 420
Q+SVHNSLIDMYCEC +LDSAC IFNWMTDK+VISWSAMIKGY K+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 480
SDGIQADF+T INILPA VHIG LENVKYLHGY+MKLGLTSL SLNTALLITYAKCG +E
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 540
MAQR+FEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGL+ +GKEFFKEMTE YGC PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKLI 714
+KGLKKTPGCS LEING VTEFRVADQTHPRAEDIYTIL NLELEIKE REK++D L+
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLV 718
BLAST of CmUC03G056410 vs. NCBI nr
Match:
XP_022139869.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momordica charantia])
HSP 1 Score: 1209.5 bits (3128), Expect = 0.0e+00
Identity = 600/716 (83.80%), Postives = 642/716 (89.66%), Query Frame = 0
Query: 1 MLHLQRSKPI----FPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTL 60
MLHLQRSKPI F NFPATQSR LNTLSFLF+RCSS Q L QIHARF+LHG HQNP L
Sbjct: 1 MLHLQRSKPIFRFEFSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPAL 60
Query: 61 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 120
S +LIDSYANLGLL LS QVF SI P STLY+AILRNL+ +GE ERTLLVY++M A SM
Sbjct: 61 SCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKSM 120
Query: 121 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQ 180
HPDEETYPSVLRS C SNV +GRKIHG+LVKLG D +D ATALAEMY +CI FEN H
Sbjct: 121 HPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGHD 180
Query: 181 LSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNS 240
L DK +K+ ECW+S +E QNGNG+ IF+LF RMR EQLV DSLTFINLLRSI LNS
Sbjct: 181 LFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLNS 240
Query: 241 IRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAA 300
I+LAKIVHC+AI S LCGDLLVNTAVLSLYSKL LV+ARKLFDKM +KDRVVWNIMIAA
Sbjct: 241 IQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIAA 300
Query: 301 YARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQ 360
Y R+G ECLELFKSMARSGIR+D+FTAL VISSISQLKCVDWGKQTHAH LRNG+D+Q
Sbjct: 301 YDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDNQ 360
Query: 361 ISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKS 420
+SVHNSLIDMYCE N+LDSACKIF+WMT+KTVISWSAMIKG KHGQSL ALSLFSRMKS
Sbjct: 361 VSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMKS 420
Query: 421 DGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEM 480
DGIQADFIT INILPA VHIG LENVKYLHGY+MKLGLTSL SLNTALLITYAKCGC+EM
Sbjct: 421 DGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIEM 480
Query: 481 AQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTAC 540
AQR+FEEER+DDKDLIMWNSMISAHANHGDWSQCFK+YNQMKCSNS+PDQVTFLGLLTAC
Sbjct: 481 AQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTAC 540
Query: 541 VNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
VNSGLV +GKE FKEM E YGCQPSQEHYACMVNLLGRAGLIN+AG LVRNMPIKPDARV
Sbjct: 541 VNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDARV 600
Query: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD
Sbjct: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
Query: 661 KGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKL 713
KGLKKTPGCSWLEINGHVTEFRVAD+THPRAEDIYTIL NLELEIKEAREK+ +KL
Sbjct: 661 KGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKL 716
BLAST of CmUC03G056410 vs. NCBI nr
Match:
KAG6573373.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 591/716 (82.54%), Postives = 640/716 (89.39%), Query Frame = 0
Query: 1 MLHLQRSKPI----FPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTL 60
M HLQRSKPI FPNFPATQSRLLNTLS LF+RC S Q L QIHARF+LHGFHQNPTL
Sbjct: 1 MFHLQRSKPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFHQNPTL 60
Query: 61 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 120
S +LID YAN GLLNLS VF SI PNS LYNAILRNLTR+GE ERTLLVY++MVA SM
Sbjct: 61 SCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREMVAKSM 120
Query: 121 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQ 180
HPDE+TYP VLRS C SNV+FG+ IHG L+KLG DS+D V T L EMYE+CIDFENAHQ
Sbjct: 121 HPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDFENAHQ 180
Query: 181 LSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNS 240
L DK SVK+++CWSS TE PQNGNG+ I RLF RM++E LV DSLTFINLLRS++ L+S
Sbjct: 181 LFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSVSGLSS 240
Query: 241 IRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAA 300
I+LAKIVHCIAIVS LCGDLLV+TAVLSLYSKL SLVDARKLF+K+ +KDRVVWNIMIAA
Sbjct: 241 IQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWNIMIAA 300
Query: 301 YARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQ 360
YAR+G+ ECLELF+SMARSGIR+D+FTAL VISSISQLK DWGKQTHA+ILRNG+DSQ
Sbjct: 301 YAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRNGSDSQ 360
Query: 361 ISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKS 420
+SVHNSLIDMYCECN LDSACKIFN +T+KTVISWSAMIKG KHG LIALSLF RMKS
Sbjct: 361 VSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFRMKS 420
Query: 421 DGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEM 480
DGIQADFIT INI+PA V IG LENVKYLHGY++KL LTSL SLNTALLITYAKCGC++M
Sbjct: 421 DGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIDM 480
Query: 481 AQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTAC 540
AQR+FEEER+DDKDLIMWNSMISAHANHGDWSQCF LYNQMKCSNS PDQVTFLGLLTAC
Sbjct: 481 AQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFNLYNQMKCSNSNPDQVTFLGLLTAC 540
Query: 541 VNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
VNSGLV +GKEFFKEM E Y CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV
Sbjct: 541 VNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
Query: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD
Sbjct: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
Query: 661 KGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKL 713
KGLKKTPGCSWLEING V EFRVAD+THPRAEDIY IL NLEL+IKEA+E + +KL
Sbjct: 661 KGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEKL 716
BLAST of CmUC03G056410 vs. NCBI nr
Match:
KAG7012542.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1187.6 bits (3071), Expect = 0.0e+00
Identity = 589/716 (82.26%), Postives = 640/716 (89.39%), Query Frame = 0
Query: 1 MLHLQRSKPI----FPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTL 60
M HLQRSKPI FPNFPATQSRLLNTLS LF+RC S Q L QIHARF+LHGFHQNPTL
Sbjct: 1 MFHLQRSKPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFHQNPTL 60
Query: 61 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 120
S +LID YAN GLLNLS VF SI PNS LYNAILRNLTR+GE ERTLLVY++MVA SM
Sbjct: 61 SCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREMVAKSM 120
Query: 121 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQ 180
HPDE+TYP VLRS C SNV+FG+ IHG L+KLG DS+D V T L EMYE+CIDFENAHQ
Sbjct: 121 HPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDFENAHQ 180
Query: 181 LSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNS 240
L DK SVK+++CWSS ++ PQNGNG+ I LF RM++E LV DSLTFINLLRSI+ L+S
Sbjct: 181 LFDKMSVKDLDCWSSLMSDAPQNGNGDDISLLFGRMKSEPLVTDSLTFINLLRSISGLSS 240
Query: 241 IRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAA 300
I+LAK+VHCIAIVS LCGDLLV+TAVLSLYSKL SLVDARKLF+K+ +KDRVVWNIMIAA
Sbjct: 241 IQLAKMVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWNIMIAA 300
Query: 301 YARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQ 360
YAR+G+ ECLELF+SMARSGIR+D+FTAL VISSISQLK DWGKQTHA+ILRNG+DSQ
Sbjct: 301 YAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRNGSDSQ 360
Query: 361 ISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKS 420
+SVHNSLIDMYCECN LDSACKIFN +T+KTVISWSAMIKG KHG LIALSLF RMKS
Sbjct: 361 VSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFRMKS 420
Query: 421 DGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEM 480
DGIQADFIT INI+PA V IG LENVKYLHGY++KL LTSL SLNTALLITYAKCGC++M
Sbjct: 421 DGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIDM 480
Query: 481 AQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTAC 540
AQR+FEEER+DDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNS PDQVTFLGLLTAC
Sbjct: 481 AQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTAC 540
Query: 541 VNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
VNSGLV +GKEFFKEM ERY CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV
Sbjct: 541 VNSGLVEKGKEFFKEMIERYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
Query: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD
Sbjct: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
Query: 661 KGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKL 713
KGLKKTPGCSWLEING V EFRVAD+THPRAEDIY IL NLEL+IKE +E + +KL
Sbjct: 661 KGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEVKEMSPEKL 716
BLAST of CmUC03G056410 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 1.1e-114
Identity = 226/709 (31.88%), Postives = 389/709 (54.87%), Query Frame = 0
Query: 9 PIFPNFPATQSRLLNTLSF------------LFNRCSSPQHLHQIHARFLLHGFHQNPTL 68
P PN P+ L+ ++ L RCSS + L QI +G +Q
Sbjct: 12 PQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFF 71
Query: 69 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 128
++L+ + G ++ + +VF I + LY+ +L+ + + ++ L + +M + +
Sbjct: 72 QTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV 131
Query: 129 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVA-TALAEMYEECIDFENAH 188
P + +L+ + +R G++IHG LVK GF S D+ A T L MY +C A
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVNEAR 191
Query: 189 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 248
++ D+ +++ W++ QNG + + M E L +T +++L +++ L
Sbjct: 192 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 251
Query: 249 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 308
I + K +H A+ S + ++TA++ +Y+K SL AR+LFD M +++ V WN MI
Sbjct: 252 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 311
Query: 309 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 368
AY ++ E + +F+ M G++ + + + + + L ++ G+ H + G D
Sbjct: 312 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 371
Query: 369 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 428
+SV NSLI MYC+C +D+A +F + +T++SW+AMI G+A++G+ + AL+ FS+M+
Sbjct: 372 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 431
Query: 429 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 488
S ++ D T ++++ A+ + + + K++HG M+ L + TAL+ YAKCG +
Sbjct: 432 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 491
Query: 489 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 548
+A+ IF + + ++ + WN+MI + HG +L+ +M+ KP+ VTFL +++A
Sbjct: 492 IARLIF--DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 551
Query: 549 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 608
C +SGLV G + F M E Y + S +HY MV+LLGRAG +NEA + + MP+KP
Sbjct: 552 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 611
Query: 609 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 668
V+G +L AC++H AE AAE+L ++ P + G ++LL+NIY AA W+ V ++R +
Sbjct: 612 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 671
Query: 669 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEA 705
+GL+KTPGCS +EI V F HP ++ IY L L IKEA
Sbjct: 672 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717
BLAST of CmUC03G056410 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 409.8 bits (1052), Expect = 6.2e-113
Identity = 226/660 (34.24%), Postives = 369/660 (55.91%), Query Frame = 0
Query: 48 HGFHQNPTLSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLV 107
+GF + L S+L Y N G L + +VF + + +N ++ L + G+ ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 108 YQQMVANSMHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEE 167
+++M+++ + D T+ V +SF S +V G ++HG+++K GF + V +L Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 168 CIDFENAHQLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINL 227
++A ++ D+ + +++ W+S NG E +F +M + D T +++
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 228 LRSIADLNSIRLAKIVHCIAIVSKLC---GDLLVNTAVLSLYSKLRSLVDARKLFDKMSD 287
AD I L + VH I + K C D NT +L +YSK L A+ +F +MSD
Sbjct: 303 FAGCADSRLISLGRAVHSIGV--KACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSD 362
Query: 288 KDRVVWNIMIAAYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQT 347
+ V + MIA YAR+G A E ++LF+ M GI D++T +V++ ++ + +D GK+
Sbjct: 363 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 422
Query: 348 HAHILRNGADSQISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQS 407
H I N I V N+L+DMY +C + A +F+ M K +ISW+ +I GY+K+ +
Sbjct: 423 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 482
Query: 408 LIALSLFS-RMKSDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTA 467
ALSLF+ ++ D T +LPA + + + +HGY M+ G S + +
Sbjct: 483 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 542
Query: 468 LLITYAKCGCLEMAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSK 527
L+ YAKCG L +A +F++ I KDL+ W MI+ + HG + L+NQM+ + +
Sbjct: 543 LVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 602
Query: 528 PDQVTFLGLLTACVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGE 587
D+++F+ LL AC +SGLV EG FF M +P+ EHYAC+V++L R G + +A
Sbjct: 603 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 662
Query: 588 LVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGK 647
+ NMPI PDA +WG LL C++H KLAE AEK+ ++EP+N G Y+L++NIYA A K
Sbjct: 663 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 722
Query: 648 WDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKE 704
W+ V ++R + +GL+K PGCSW+EI G V F D ++P E+I LR + + E
Sbjct: 723 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
BLAST of CmUC03G056410 vs. ExPASy Swiss-Prot
Match:
O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 399.4 bits (1025), Expect = 8.3e-110
Identity = 233/688 (33.87%), Postives = 385/688 (55.96%), Query Frame = 0
Query: 18 QSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTLSSQLIDSYANLGLLNLSLQVF 77
+S+ ++ + LF C++ Q +HAR ++ QN +S++L++ Y LG + L+ F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 78 YSIAHPNSTLYNAILRNLTRYGECERTLLVYQQ-MVANSMHPDEETYPSVLRSFCSFSNV 137
I + + +N ++ R G + + M+++ + PD T+PSVL+ + V
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK---ACRTV 169
Query: 138 RFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQLSDKRSVKNMECWSSFTTET 197
G KIH +K GF VA +L +Y NA L D+ V++M W++ +
Sbjct: 170 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229
Query: 198 PQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNSIRLAKIVHCIAIVSKLCGDL 257
Q+GN + L +RA DS+T ++LL + + +H +I L +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289
Query: 258 LVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAAYARDGKATECLELFKSMARS 317
V+ ++ LY++ L D +K+FD+M +D + WN +I AY + + + LF+ M S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349
Query: 318 GIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNG-ADSQISVHNSLIDMYCECNLLDS 377
I+ D T +S+ S +SQL + + LR G I++ N+++ MY + L+DS
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409
Query: 378 ACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKSDG-IQADFITAINILPALV 437
A +FNW+ + VISW+ +I GYA++G + A+ +++ M+ +G I A+ T +++LPA
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469
Query: 438 HIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEMAQRIFEEERIDDKDLIMW 497
G L LHG +K GL + T+L Y KCG LE A +F + I + + W
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPW 529
Query: 498 NSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTACVNSGLVAEGKEFFKEMTE 557
N++I+ H HG + L+ +M KPD +TF+ LL+AC +SGLV EG+ F+ M
Sbjct: 530 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 589
Query: 558 RYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAE 617
YG PS +HY CMV++ GRAG + A + +++M ++PDA +WG LLSAC++H L +
Sbjct: 590 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 649
Query: 618 FAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHV 677
A+E L ++EP++ G ++LLSN+YA+AGKW+GV ++RS KGL+KTPG S +E++ V
Sbjct: 650 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 709
Query: 678 TEFRVADQTHPRAEDIYTILRNLELEIK 703
F +QTHP E++Y L L+ ++K
Sbjct: 710 EVFYTGNQTHPMYEEMYRELTALQAKLK 728
BLAST of CmUC03G056410 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 397.9 bits (1021), Expect = 2.4e-109
Identity = 229/715 (32.03%), Postives = 392/715 (54.83%), Query Frame = 0
Query: 18 QSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTLSSQLIDSYANLGL---LNLSL 77
QS+ C + L H G + + ++L+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 78 QVF-YSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSMHPDEETYPSVLRSFCSF 137
+VF S ++ +YN+++R G C +L++ +M+ + + PD+ T+P L S C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL-SACAK 147
Query: 138 SNVR-FGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQLSDKRSVKNMECWSSF 197
S + G +IHG +VK+G+ V +L Y EC + ++A ++ D+ S +N+ W+S
Sbjct: 148 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 207
Query: 198 TTETPQNGNGEGIFRLFRRM-RAEQLVRDSLTFINLLRSIADLNSIRLAKIVHCIAIVSK 257
+ + LF RM R E++ +S+T + ++ + A L + + V+ S
Sbjct: 208 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 267
Query: 258 LCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAAYARDGKATECLELFK 317
+ + L+ +A++ +Y K ++ A++LFD+ + + N M + Y R G E L +F
Sbjct: 268 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 327
Query: 318 SMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQISVHNSLIDMYCECN 377
M SG+R D + LS ISS SQL+ + WGK H ++LRNG +S ++ N+LIDMY +C+
Sbjct: 328 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 387
Query: 378 LLDSACKIFNWMTDKTVISWSAMIKGYAKHGQ------------------------SLIA 437
D+A +IF+ M++KTV++W++++ GY ++G+ L+
Sbjct: 388 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 447
Query: 438 LSLF--------SRMKSDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSS 497
SLF S +G+ AD +T ++I A H+G L+ K+++ Y K G+
Sbjct: 448 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 507
Query: 498 LNTALLITYAKCGCLEMAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKC 557
L T L+ +++CG E A IF + ++D+ W + I A A G+ + +L++ M
Sbjct: 508 LGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 567
Query: 558 SNSKPDQVTFLGLLTACVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLIN 617
KPD V F+G LTAC + GLV +GKE F M + +G P HY CMV+LLGRAGL+
Sbjct: 568 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 627
Query: 618 EAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYA 677
EA +L+ +MP++P+ +W LL+AC++ ++A +AAEK+ + P+ G+Y+LLSN+YA
Sbjct: 628 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 687
Query: 678 AAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL 695
+AG+W+ +AK+R +++KGL+K PG S ++I G EF D++HP +I +L
Sbjct: 688 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
BLAST of CmUC03G056410 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 1.7e-107
Identity = 209/655 (31.91%), Postives = 367/655 (56.03%), Query Frame = 0
Query: 49 GFHQNPTLSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVY 108
G N ++S LI +Y G +++ ++F + + ++N +L + G + + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 109 QQMVANSMHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEEC 168
M + + P+ T+ VL S + G ++HG +V G D + +L MY +C
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 169 IDFENAHQLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLL 228
F++A +L S + W+ + Q+G E F M + ++ D++TF +LL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 229 RSIADLNSIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRV 288
S++ ++ K +HC + + D+ + +A++ Y K R + A+ +F + + D V
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 289 VWNIMIAAYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHI 348
V+ MI+ Y +G + LE+F+ + + I + T +S++ I L + G++ H I
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 349 LRNGADSQISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIAL 408
++ G D++ ++ ++IDMY +C ++ A +IF ++ + ++SW++MI A+ A+
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 409 SLFSRMKSDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITY 468
+F +M GI D ++ L A ++ K +HG+ +K L S + L+ Y
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 469 AKCGCLEMAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQM-KCSNSKPDQV 528
AKCG L+ A +F + + +K+++ WNS+I+A NHG L+++M + S +PDQ+
Sbjct: 588 AKCGNLKAAMNVF--KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 647
Query: 529 TFLGLLTACVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRN 588
TFL ++++C + G V EG FF+ MTE YG QP QEHYAC+V+L GRAG + EA E V++
Sbjct: 648 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 707
Query: 589 MPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGV 648
MP PDA VWG LL AC+LH +LAE A+ KL+D++P N+G Y+L+SN +A A +W+ V
Sbjct: 708 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 767
Query: 649 AKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIK 703
K+RS ++++ ++K PG SW+EIN F D HP + IY++L +L E++
Sbjct: 768 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
BLAST of CmUC03G056410 vs. ExPASy TrEMBL
Match:
A0A0A0M0Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1)
HSP 1 Score: 1242.3 bits (3213), Expect = 0.0e+00
Identity = 622/718 (86.63%), Postives = 659/718 (91.78%), Query Frame = 0
Query: 1 MLHLQRSK-----PIFPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPT 60
MLHL RSK PIF NFPATQSRLLNTLS LF+RC+S QHL QIHARF+LHGFHQNPT
Sbjct: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANS 120
LSS+LID YANLGLLN SLQVF S+ PN TL+NAILRNLTRYGE ERTLLVYQQMVA S
Sbjct: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAH 180
MHPDEETYP VLRS SFSNV FGR IHGYLVKLGFD FD+VATALAEMYEECI+FENAH
Sbjct: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
Query: 181 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 240
QL DKRSVK++ SS TTE PQN NGEGIFR+F RM AEQLV DS TF NLLR IA LN
Sbjct: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
Query: 241 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 300
SI+LAKIVHCIAIVSKL GDLLVNTAVLSLYSKLRSLVDARKLFDKM +KDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 360
AYAR+GK TECLELFKSMARSGIRSD+FTAL VISSI+QLKCVDWGKQTHAHILRNG+DS
Sbjct: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 420
Q+SVHNSLIDMYCEC +LDSACKIFNWMTDK+VISWSAMIKGY K+GQSL ALSLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
Query: 421 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 480
SDGIQADF+ INILPA VHIG LENVKYLHGY+MKLGLTSL SLNTALLITYAKCG +E
Sbjct: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 540
MAQR+FEEE+IDDKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLV +GKEFFKEMTE YGCQPSQEHYACMVNLLGRAGLI+EAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKLI 714
+KGLKK PGCSWLEINGHVTEFRVADQTHPRA DIYTIL NLELEIKE REK+ D L+
Sbjct: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLV 718
BLAST of CmUC03G056410 vs. ExPASy TrEMBL
Match:
A0A5D3DB69 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00810 PE=4 SV=1)
HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 616/718 (85.79%), Postives = 654/718 (91.09%), Query Frame = 0
Query: 1 MLHLQRSKPIFP-----NFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPT 60
MLHLQRSKPI NFPATQSRLLNTLS LFNRC+S QHL QIHARF+LHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANS 120
LSS+LID YANLGLL SLQVF SI PN TL+NAILRNLTRYGE ER LLVYQQMVA S
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAH 180
MHPDEETYP + RS SFSNV FGR IHGYLVKLGFDSFD+VATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 240
QL DKRSVK++ SS TTE QNGNGEGIFR+F RMRAEQLV DSLTF+NLLR IA LN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 300
SI+LAKIVHCIAIVSKL GDLLV TAVLSLYSKLRSLVDAR+LFDKM +KDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 360
AYAR+GK ECLELFKSMARSGIRSD+FTAL VISSI+QLKCVDWGKQTHAHILRNG+DS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 420
Q+SVHNSLIDMYCEC +LDSAC IFNWMTDK+VISWSAMIKGY K+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 480
SDGIQADF+T INILPA VHIG LENVKYLHGY+MKLGLTSL SLNTALLITYAKCG +E
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 540
MAQR+FEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGL+ +GKEFFKEMTE YGC PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKLI 714
+KGLKKTPGCS LEING VTEFRVADQTHPRAEDIYTIL NLELEIKE REK++D L+
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLV 718
BLAST of CmUC03G056410 vs. ExPASy TrEMBL
Match:
A0A1S3BBG7 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487849 PE=4 SV=1)
HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 616/718 (85.79%), Postives = 654/718 (91.09%), Query Frame = 0
Query: 1 MLHLQRSKPIFP-----NFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPT 60
MLHLQRSKPI NFPATQSRLLNTLS LFNRC+S QHL QIHARF+LHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANS 120
LSS+LID YANLGLL SLQVF SI PN TL+NAILRNLTRYGE ER LLVYQQMVA S
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAH 180
MHPDEETYP + RS SFSNV FGR IHGYLVKLGFDSFD+VATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 240
QL DKRSVK++ SS TTE QNGNGEGIFR+F RMRAEQLV DSLTF+NLLR IA LN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 300
SI+LAKIVHCIAIVSKL GDLLV TAVLSLYSKLRSLVDAR+LFDKM +KDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 360
AYAR+GK ECLELFKSMARSGIRSD+FTAL VISSI+QLKCVDWGKQTHAHILRNG+DS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 420
Q+SVHNSLIDMYCEC +LDSAC IFNWMTDK+VISWSAMIKGY K+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 480
SDGIQADF+T INILPA VHIG LENVKYLHGY+MKLGLTSL SLNTALLITYAKCG +E
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 540
MAQR+FEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGL+ +GKEFFKEMTE YGC PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKLI 714
+KGLKKTPGCS LEING VTEFRVADQTHPRAEDIYTIL NLELEIKE REK++D L+
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLV 718
BLAST of CmUC03G056410 vs. ExPASy TrEMBL
Match:
A0A6J1CE61 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010677 PE=4 SV=1)
HSP 1 Score: 1209.5 bits (3128), Expect = 0.0e+00
Identity = 600/716 (83.80%), Postives = 642/716 (89.66%), Query Frame = 0
Query: 1 MLHLQRSKPI----FPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTL 60
MLHLQRSKPI F NFPATQSR LNTLSFLF+RCSS Q L QIHARF+LHG HQNP L
Sbjct: 1 MLHLQRSKPIFRFEFSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPAL 60
Query: 61 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 120
S +LIDSYANLGLL LS QVF SI P STLY+AILRNL+ +GE ERTLLVY++M A SM
Sbjct: 61 SCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKSM 120
Query: 121 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQ 180
HPDEETYPSVLRS C SNV +GRKIHG+LVKLG D +D ATALAEMY +CI FEN H
Sbjct: 121 HPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGHD 180
Query: 181 LSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNS 240
L DK +K+ ECW+S +E QNGNG+ IF+LF RMR EQLV DSLTFINLLRSI LNS
Sbjct: 181 LFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLNS 240
Query: 241 IRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAA 300
I+LAKIVHC+AI S LCGDLLVNTAVLSLYSKL LV+ARKLFDKM +KDRVVWNIMIAA
Sbjct: 241 IQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIAA 300
Query: 301 YARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQ 360
Y R+G ECLELFKSMARSGIR+D+FTAL VISSISQLKCVDWGKQTHAH LRNG+D+Q
Sbjct: 301 YDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDNQ 360
Query: 361 ISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKS 420
+SVHNSLIDMYCE N+LDSACKIF+WMT+KTVISWSAMIKG KHGQSL ALSLFSRMKS
Sbjct: 361 VSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMKS 420
Query: 421 DGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEM 480
DGIQADFIT INILPA VHIG LENVKYLHGY+MKLGLTSL SLNTALLITYAKCGC+EM
Sbjct: 421 DGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIEM 480
Query: 481 AQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTAC 540
AQR+FEEER+DDKDLIMWNSMISAHANHGDWSQCFK+YNQMKCSNS+PDQVTFLGLLTAC
Sbjct: 481 AQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTAC 540
Query: 541 VNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
VNSGLV +GKE FKEM E YGCQPSQEHYACMVNLLGRAGLIN+AG LVRNMPIKPDARV
Sbjct: 541 VNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDARV 600
Query: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD
Sbjct: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
Query: 661 KGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKL 713
KGLKKTPGCSWLEINGHVTEFRVAD+THPRAEDIYTIL NLELEIKEAREK+ +KL
Sbjct: 661 KGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKL 716
BLAST of CmUC03G056410 vs. ExPASy TrEMBL
Match:
A0A6J1GR57 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456773 PE=4 SV=1)
HSP 1 Score: 1182.2 bits (3057), Expect = 0.0e+00
Identity = 587/716 (81.98%), Postives = 637/716 (88.97%), Query Frame = 0
Query: 1 MLHLQRSKPI----FPNFPATQSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTL 60
M HLQRSKPI FPNFPAT SRLLNTLS LF+RC S Q L QIHARF+LHGFHQNPTL
Sbjct: 1 MFHLQRSKPIFRFKFPNFPATHSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFHQNPTL 60
Query: 61 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 120
S +LID YAN GLLNLS VF SI PNS LYNAILRNLTR+GE ERTLLVY++MVA SM
Sbjct: 61 SCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREMVAKSM 120
Query: 121 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQ 180
HPDE+TYP VLRS C SNV+FG+ IHG L+KLG DS+D V T L EMYE+CIDFENAHQ
Sbjct: 121 HPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDFENAHQ 180
Query: 181 LSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNS 240
L DK SVK+++CWSS TE PQNGNG+ I RLF RM++E LV DSLTFINLLRS++ L+S
Sbjct: 181 LFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSVSGLSS 240
Query: 241 IRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAA 300
I+LAKIVHCIAIVS LCGDLLV+TAVLSLYSKL SLVDARKLF+K+ +KDRVVWNIMIAA
Sbjct: 241 IQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWNIMIAA 300
Query: 301 YARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQ 360
YAR+G+ ECLELF+SMARSGIR+D+FT L VISSISQLK DWGKQTHA+ILRNG+DSQ
Sbjct: 301 YAREGRPMECLELFESMARSGIRADLFTVLPVISSISQLKRADWGKQTHANILRNGSDSQ 360
Query: 361 ISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKS 420
+SVHNSLIDMYCECN LDSA KIFN +T+KTVISWSAMIKG KHG LIALSLF RMKS
Sbjct: 361 VSVHNSLIDMYCECNSLDSASKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFRMKS 420
Query: 421 DGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEM 480
DGIQADFIT INI+PA V IG LENVKYLHGY++KL LTSL SLNTALLITYAKCGC++M
Sbjct: 421 DGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIDM 480
Query: 481 AQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTAC 540
AQR+FEEER++DKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNS PDQVTFLGLLTAC
Sbjct: 481 AQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTAC 540
Query: 541 VNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
VNSGLV +GKEFFKEM E Y CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV
Sbjct: 541 VNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARV 600
Query: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD
Sbjct: 601 WGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRD 660
Query: 661 KGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEAREKNIDKL 713
KGLKKTPGCSWLEING V EFRVAD+THPRAEDIY IL NLEL+IKE +E + +KL
Sbjct: 661 KGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEVKEMSPEKL 716
BLAST of CmUC03G056410 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 415.6 bits (1067), Expect = 8.0e-116
Identity = 226/709 (31.88%), Postives = 389/709 (54.87%), Query Frame = 0
Query: 9 PIFPNFPATQSRLLNTLSF------------LFNRCSSPQHLHQIHARFLLHGFHQNPTL 68
P PN P+ L+ ++ L RCSS + L QI +G +Q
Sbjct: 12 PQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFF 71
Query: 69 SSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSM 128
++L+ + G ++ + +VF I + LY+ +L+ + + ++ L + +M + +
Sbjct: 72 QTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV 131
Query: 129 HPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVA-TALAEMYEECIDFENAH 188
P + +L+ + +R G++IHG LVK GF S D+ A T L MY +C A
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVNEAR 191
Query: 189 QLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLN 248
++ D+ +++ W++ QNG + + M E L +T +++L +++ L
Sbjct: 192 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 251
Query: 249 SIRLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIA 308
I + K +H A+ S + ++TA++ +Y+K SL AR+LFD M +++ V WN MI
Sbjct: 252 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 311
Query: 309 AYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADS 368
AY ++ E + +F+ M G++ + + + + + L ++ G+ H + G D
Sbjct: 312 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 371
Query: 369 QISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMK 428
+SV NSLI MYC+C +D+A +F + +T++SW+AMI G+A++G+ + AL+ FS+M+
Sbjct: 372 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 431
Query: 429 SDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLE 488
S ++ D T ++++ A+ + + + K++HG M+ L + TAL+ YAKCG +
Sbjct: 432 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 491
Query: 489 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTA 548
+A+ IF + + ++ + WN+MI + HG +L+ +M+ KP+ VTFL +++A
Sbjct: 492 IARLIF--DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 551
Query: 549 CVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 608
C +SGLV G + F M E Y + S +HY MV+LLGRAG +NEA + + MP+KP
Sbjct: 552 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 611
Query: 609 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 668
V+G +L AC++H AE AAE+L ++ P + G ++LL+NIY AA W+ V ++R +
Sbjct: 612 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 671
Query: 669 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKEA 705
+GL+KTPGCS +EI V F HP ++ IY L L IKEA
Sbjct: 672 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717
BLAST of CmUC03G056410 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 409.8 bits (1052), Expect = 4.4e-114
Identity = 226/660 (34.24%), Postives = 369/660 (55.91%), Query Frame = 0
Query: 48 HGFHQNPTLSSQLIDSYANLGLLNLSLQVFYSIAHPNSTLYNAILRNLTRYGECERTLLV 107
+GF + L S+L Y N G L + +VF + + +N ++ L + G+ ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 108 YQQMVANSMHPDEETYPSVLRSFCSFSNVRFGRKIHGYLVKLGFDSFDIVATALAEMYEE 167
+++M+++ + D T+ V +SF S +V G ++HG+++K GF + V +L Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 168 CIDFENAHQLSDKRSVKNMECWSSFTTETPQNGNGEGIFRLFRRMRAEQLVRDSLTFINL 227
++A ++ D+ + +++ W+S NG E +F +M + D T +++
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 228 LRSIADLNSIRLAKIVHCIAIVSKLC---GDLLVNTAVLSLYSKLRSLVDARKLFDKMSD 287
AD I L + VH I + K C D NT +L +YSK L A+ +F +MSD
Sbjct: 303 FAGCADSRLISLGRAVHSIGV--KACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSD 362
Query: 288 KDRVVWNIMIAAYARDGKATECLELFKSMARSGIRSDMFTALSVISSISQLKCVDWGKQT 347
+ V + MIA YAR+G A E ++LF+ M GI D++T +V++ ++ + +D GK+
Sbjct: 363 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 422
Query: 348 HAHILRNGADSQISVHNSLIDMYCECNLLDSACKIFNWMTDKTVISWSAMIKGYAKHGQS 407
H I N I V N+L+DMY +C + A +F+ M K +ISW+ +I GY+K+ +
Sbjct: 423 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 482
Query: 408 LIALSLFS-RMKSDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSSLNTA 467
ALSLF+ ++ D T +LPA + + + +HGY M+ G S + +
Sbjct: 483 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 542
Query: 468 LLITYAKCGCLEMAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSK 527
L+ YAKCG L +A +F++ I KDL+ W MI+ + HG + L+NQM+ + +
Sbjct: 543 LVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 602
Query: 528 PDQVTFLGLLTACVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLINEAGE 587
D+++F+ LL AC +SGLV EG FF M +P+ EHYAC+V++L R G + +A
Sbjct: 603 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 662
Query: 588 LVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGK 647
+ NMPI PDA +WG LL C++H KLAE AEK+ ++EP+N G Y+L++NIYA A K
Sbjct: 663 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 722
Query: 648 WDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILRNLELEIKE 704
W+ V ++R + +GL+K PGCSW+EI G V F D ++P E+I LR + + E
Sbjct: 723 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
BLAST of CmUC03G056410 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 399.4 bits (1025), Expect = 5.9e-111
Identity = 233/688 (33.87%), Postives = 385/688 (55.96%), Query Frame = 0
Query: 18 QSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTLSSQLIDSYANLGLLNLSLQVF 77
+S+ ++ + LF C++ Q +HAR ++ QN +S++L++ Y LG + L+ F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 78 YSIAHPNSTLYNAILRNLTRYGECERTLLVYQQ-MVANSMHPDEETYPSVLRSFCSFSNV 137
I + + +N ++ R G + + M+++ + PD T+PSVL+ + V
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK---ACRTV 169
Query: 138 RFGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQLSDKRSVKNMECWSSFTTET 197
G KIH +K GF VA +L +Y NA L D+ V++M W++ +
Sbjct: 170 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229
Query: 198 PQNGNGEGIFRLFRRMRAEQLVRDSLTFINLLRSIADLNSIRLAKIVHCIAIVSKLCGDL 257
Q+GN + L +RA DS+T ++LL + + +H +I L +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289
Query: 258 LVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAAYARDGKATECLELFKSMARS 317
V+ ++ LY++ L D +K+FD+M +D + WN +I AY + + + LF+ M S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349
Query: 318 GIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNG-ADSQISVHNSLIDMYCECNLLDS 377
I+ D T +S+ S +SQL + + LR G I++ N+++ MY + L+DS
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409
Query: 378 ACKIFNWMTDKTVISWSAMIKGYAKHGQSLIALSLFSRMKSDG-IQADFITAINILPALV 437
A +FNW+ + VISW+ +I GYA++G + A+ +++ M+ +G I A+ T +++LPA
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469
Query: 438 HIGVLENVKYLHGYAMKLGLTSLSSLNTALLITYAKCGCLEMAQRIFEEERIDDKDLIMW 497
G L LHG +K GL + T+L Y KCG LE A +F + I + + W
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPW 529
Query: 498 NSMISAHANHGDWSQCFKLYNQMKCSNSKPDQVTFLGLLTACVNSGLVAEGKEFFKEMTE 557
N++I+ H HG + L+ +M KPD +TF+ LL+AC +SGLV EG+ F+ M
Sbjct: 530 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 589
Query: 558 RYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAE 617
YG PS +HY CMV++ GRAG + A + +++M ++PDA +WG LLSAC++H L +
Sbjct: 590 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 649
Query: 618 FAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHV 677
A+E L ++EP++ G ++LLSN+YA+AGKW+GV ++RS KGL+KTPG S +E++ V
Sbjct: 650 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 709
Query: 678 TEFRVADQTHPRAEDIYTILRNLELEIK 703
F +QTHP E++Y L L+ ++K
Sbjct: 710 EVFYTGNQTHPMYEEMYRELTALQAKLK 728
BLAST of CmUC03G056410 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-110
Identity = 229/715 (32.03%), Postives = 392/715 (54.83%), Query Frame = 0
Query: 18 QSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTLSSQLIDSYANLGL---LNLSL 77
QS+ C + L H G + + ++L+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 78 QVF-YSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSMHPDEETYPSVLRSFCSF 137
+VF S ++ +YN+++R G C +L++ +M+ + + PD+ T+P L S C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL-SACAK 147
Query: 138 SNVR-FGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQLSDKRSVKNMECWSSF 197
S + G +IHG +VK+G+ V +L Y EC + ++A ++ D+ S +N+ W+S
Sbjct: 148 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 207
Query: 198 TTETPQNGNGEGIFRLFRRM-RAEQLVRDSLTFINLLRSIADLNSIRLAKIVHCIAIVSK 257
+ + LF RM R E++ +S+T + ++ + A L + + V+ S
Sbjct: 208 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 267
Query: 258 LCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAAYARDGKATECLELFK 317
+ + L+ +A++ +Y K ++ A++LFD+ + + N M + Y R G E L +F
Sbjct: 268 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 327
Query: 318 SMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQISVHNSLIDMYCECN 377
M SG+R D + LS ISS SQL+ + WGK H ++LRNG +S ++ N+LIDMY +C+
Sbjct: 328 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 387
Query: 378 LLDSACKIFNWMTDKTVISWSAMIKGYAKHGQ------------------------SLIA 437
D+A +IF+ M++KTV++W++++ GY ++G+ L+
Sbjct: 388 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 447
Query: 438 LSLF--------SRMKSDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSS 497
SLF S +G+ AD +T ++I A H+G L+ K+++ Y K G+
Sbjct: 448 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 507
Query: 498 LNTALLITYAKCGCLEMAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKC 557
L T L+ +++CG E A IF + ++D+ W + I A A G+ + +L++ M
Sbjct: 508 LGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 567
Query: 558 SNSKPDQVTFLGLLTACVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLIN 617
KPD V F+G LTAC + GLV +GKE F M + +G P HY CMV+LLGRAGL+
Sbjct: 568 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 627
Query: 618 EAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYA 677
EA +L+ +MP++P+ +W LL+AC++ ++A +AAEK+ + P+ G+Y+LLSN+YA
Sbjct: 628 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 687
Query: 678 AAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL 695
+AG+W+ +AK+R +++KGL+K PG S ++I G EF D++HP +I +L
Sbjct: 688 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
BLAST of CmUC03G056410 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-110
Identity = 229/715 (32.03%), Postives = 392/715 (54.83%), Query Frame = 0
Query: 18 QSRLLNTLSFLFNRCSSPQHLHQIHARFLLHGFHQNPTLSSQLIDSYANLGL---LNLSL 77
QS+ C + L H G + + ++L+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 78 QVF-YSIAHPNSTLYNAILRNLTRYGECERTLLVYQQMVANSMHPDEETYPSVLRSFCSF 137
+VF S ++ +YN+++R G C +L++ +M+ + + PD+ T+P L S C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL-SACAK 147
Query: 138 SNVR-FGRKIHGYLVKLGFDSFDIVATALAEMYEECIDFENAHQLSDKRSVKNMECWSSF 197
S + G +IHG +VK+G+ V +L Y EC + ++A ++ D+ S +N+ W+S
Sbjct: 148 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 207
Query: 198 TTETPQNGNGEGIFRLFRRM-RAEQLVRDSLTFINLLRSIADLNSIRLAKIVHCIAIVSK 257
+ + LF RM R E++ +S+T + ++ + A L + + V+ S
Sbjct: 208 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 267
Query: 258 LCGDLLVNTAVLSLYSKLRSLVDARKLFDKMSDKDRVVWNIMIAAYARDGKATECLELFK 317
+ + L+ +A++ +Y K ++ A++LFD+ + + N M + Y R G E L +F
Sbjct: 268 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 327
Query: 318 SMARSGIRSDMFTALSVISSISQLKCVDWGKQTHAHILRNGADSQISVHNSLIDMYCECN 377
M SG+R D + LS ISS SQL+ + WGK H ++LRNG +S ++ N+LIDMY +C+
Sbjct: 328 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 387
Query: 378 LLDSACKIFNWMTDKTVISWSAMIKGYAKHGQ------------------------SLIA 437
D+A +IF+ M++KTV++W++++ GY ++G+ L+
Sbjct: 388 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 447
Query: 438 LSLF--------SRMKSDGIQADFITAINILPALVHIGVLENVKYLHGYAMKLGLTSLSS 497
SLF S +G+ AD +T ++I A H+G L+ K+++ Y K G+
Sbjct: 448 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 507
Query: 498 LNTALLITYAKCGCLEMAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKC 557
L T L+ +++CG E A IF + ++D+ W + I A A G+ + +L++ M
Sbjct: 508 LGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 567
Query: 558 SNSKPDQVTFLGLLTACVNSGLVAEGKEFFKEMTERYGCQPSQEHYACMVNLLGRAGLIN 617
KPD V F+G LTAC + GLV +GKE F M + +G P HY CMV+LLGRAGL+
Sbjct: 568 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 627
Query: 618 EAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYA 677
EA +L+ +MP++P+ +W LL+AC++ ++A +AAEK+ + P+ G+Y+LLSN+YA
Sbjct: 628 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 687
Query: 678 AAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL 695
+AG+W+ +AK+R +++KGL+K PG S ++I G EF D++HP +I +L
Sbjct: 688 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038894029.1 | 0.0e+00 | 90.10 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benin... | [more] |
XP_008444579.1 | 0.0e+00 | 85.79 | PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-... | [more] |
XP_022139869.1 | 0.0e+00 | 83.80 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momor... | [more] |
KAG6573373.1 | 0.0e+00 | 82.54 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG7012542.1 | 0.0e+00 | 82.26 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q3E6Q1 | 1.1e-114 | 31.88 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9SN39 | 6.2e-113 | 34.24 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
O81767 | 8.3e-110 | 33.87 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... | [more] |
Q9LUJ2 | 2.4e-109 | 32.03 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9STE1 | 1.7e-107 | 31.91 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0M0Z6 | 0.0e+00 | 86.63 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1 | [more] |
A0A5D3DB69 | 0.0e+00 | 85.79 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BBG7 | 0.0e+00 | 85.79 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A6J1CE61 | 0.0e+00 | 83.80 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Mom... | [more] |
A0A6J1GR57 | 0.0e+00 | 81.98 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 8.0e-116 | 31.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18750.1 | 4.4e-114 | 34.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G33990.1 | 5.9e-111 | 33.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 1.7e-110 | 32.03 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 1.7e-110 | 32.03 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |