CmUC03G056160 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G056160
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
Location	CmU531Chr03: 6508332 .. 6513232 (-)
RNA-Seq Expression	CmUC03G056160
Synteny	CmUC03G056160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTAAGTTAGCATTTCGAACCCTAACACTCTGCTATCTCCTCACTCGGTCAGGTCTGCGTTTCTCTCAGGTTCTCACTCTTAGATTACGGAATTTGACATAGTGGATTGAAAGGTTTGGAATTTTCAAATTCTGAAACCAATATTTTCTTCTGTTTTTTCGATTTTTCTTTTTCTATAACGAGAGCCAATTCGTTTGTTTGGTAAGGAGAAAATGAAAAATGATTGGACTTCATTTTCTGCCACGATGTGGAAGCAAATCTCTTTGGCGATGATACCAAAGCTAAATTATCTATTTTCTGTTGTTTTTTCATGGTGAAATTAGGAATTTATCGAATTAGAGATGGCGAGCGCAGTAGATGCTGCAGGAGATCCAATTCCTACGTCGGCGGTGCTAATGTCTTCGTCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTGGCATATCTCCAGTGTAAACAAAAGGATCCGAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTAAGCGATTAACATTTTGTTATTTTCTTAGCCAAAGTATGAATTCGCATTTCTCCGGAAAATTGCTTTAGTTATCATATGATCGTCTTCTGATCTGCTAGCAAATTGGGGATCAGGAAATATATTGCTTTAGTAATCATATGATCGTCTTCTAGCAAATAGGGGGCTTTAGTTATCATATGATTGTCTTCTGGTCCGCTAGGAAACTGGAAAGAAAATAAGTGGTATTTCTTAGGTTTGACACAAAATAATTAGTACAGGTGCTGATAAAATCTTAGGTTGATAATCATGTATCTGACGAAATGATAGTGTCCGTGGTCTTATGGTGCCACCAATTCGTATCTCAGCCCCATTAGCTCAGGTTCACGGTGGAATAACGGACTGTGGAGGTCTTCCACATTCAGAAGGCACGGTGGAATTAATGGATTTGGCGGTGGAGTTGAGCTGTGAAGTGGATCATCTTCCCATAAATTACCTTGGTTTTTCCCTTGATGGTAACCACCACTCCCTCGCCTCTTGGGAACCGTTAGTTGACAAGTCCAAAGCAAAGATTGCCGAGTGGAAAAGCTCCTTTCTTTCAAGGGGACGCCTAACCTTGTTACACTTTGTGCTTAATGGGCTGCCATTGTATTATTTTTCTCTCCTCAAAACGCTGGTGGGCACTATTAATAGTATGGAGAAGTTGCGCATAGATTTTTTTGGTGCTGATTACAAGGCCAGTAGTTATTTGGTTAAGTGGAAAATCACCTCTCTCCCCCCTTGCAATAGTGGTTTGGGGATAGGGTCTCTTAAAAAAAAAATCTTGCTCCTCTCAAAATGGCTGTGGAGATTCTCGATAGAGAGGAAGGTTGGTAGGAACCAAGGTTGTGTGGGCTACCTTTGTCCCACTTGGATTAGAATGGGATGACCAATGTGGTACTTAAGTGGTTTGACTCTCTCATCTCAATAGCTGACTTTTGGGGTGTGATTCTCCAAGGTGCTTAAGTACCTAACAACCCTTTGGAGGAAAGTGGTAAAGCAAAATTTATGGTGAAGGATCTCTAGGATGGATGATCCATCAACCTAAAGGTTACTCCAAAAAAAACAGCCCATGGTTTGACTTAAGTTTGTTAAATTCAAAGCCGGAAGTGGGCAGGAGATTTGCTTTGCTTTCAGAAGGATGTGTGAATTGGGGAAACCCTTCATGAAGCTTTTCCAGAAATTTATAGCTTCTCTTAGGAAAGAACCAAAGAGGCGACAGTGGCAAGTTGTCGGGTTGATATTAATGAAAAGTGGCGAGTTGTTGGGTTGATATTAATGAAACGTGGAATTGGAGCATTAGGAGTGGCATCTTTGATTGAGAGCTCCAAGCTTGGATTGCTTTGATTGGCAAATTGGATGCTTTTCGCTTGGGGTTAGGTGGATTCCTCTGGTGCTCTCTACTAGAACACTTCTTTTGAAGTTTGGTGGAAATAGGTCGACTATGACTGATACGATTTGGAATTTTAAGATTCTTAAGAAGGTGAAGGTGTAATTATTAGTTAGGTGTTATTCTTTTGGATTGGAAGCCCTTTTTTAGGTTTAGGCCTCTTTTGCGTGACCTATTTTTTGTATGTCTTGTATATCTTTTTATGTCTCTTAATAAAAATGTATTTTCATATTAAAAGTGAAAATTATGGAAAAAGATAATGGCAATGGAGTTCGATGTGGTTTCTGATTAAAATATCTTGGTCAATAATGAAGCCCTCATGGAGAAGAGTCTTGGTGTGAGCGCAATCGCTGTATGTTTAAGAACTCTTCGTCTTTTTTGATAGATTTATGGATATGGTCTTGTCTACTGCTTTTTATTGGTTCAAGGATAAGCACCCTTTTAATCTTTTTAACTTGTCTTATTTAGTCTCCAATTGGAAATGTTTCTTGTAATTTCCCATTGGCTTTTGGGGGTTTCCCTTTTCATTAATCAATGATTTTTATTTTTTTTTTAGAAAAAAAAAAAAGCCCTCACGAAGAGTCATACAAAGAAGCACTATGTTTTCTCTTCCATGCAGAAAATATTCCTCATTCAATCGAAAATGTTGCCTCCGTCCATTTTTCTCAAAGTTGTATATTTTACAAAGAATATTCTTTTTTCCAAAATTTCTAGATGATTATGTAATTGTTGCTTATGAGACTAATTCGAGGATACCAGCCGATGGAAGCCTTGTGGCCTAGTAACAGGTGGACTGAATAGAATAAACTAATTTCTAACAAACTAGTTTGTTTAATGAAGATCATTTGATGGATCACTAGAGGATTATTTTTATTATTATTTTAACTATTTGTGAGTGTGGAGCGCACTCAAAGGATTTTTGAGAATAAATAACTAGTTGGTTTGAGCTGTTTGAACAGTTCAAGTTTAGCTAGATCGAAAACTTCAAATGGTGTTCCTTGTTAAAATTTATTGATGATTTATCTTTTCAGAATATTTGTTTGCAGTCATGTTCCCATTTAGTTGGTACTTTTCTCTTATCTTTTTGTCCACTCCCTTTGGAAGTTTGTATAACTGAACACTTTTTTTTTTTTTTGTTTAATTTCATTTGATCAATGAAAGGTTTTGTATATTGTTTAAAAGGAAAAAATCGTGGATATAAGCGAATGTTATTAGAAATATGCGAGGTTAGATGACAATGATGAATGAACAATTCTAATTCCACAATTTTCGGAGGCAAAAGCTTTTGCTTGAACAATGCTTGATCATTTACAAGTACTGCACATCTGATTACTCTGTATGTTGAGAATTTTTGTTCCCGAGGGATTTGTAATTATCTTGATTTTCCATTTTATTGTTCCTAAGTTCTACCTTCTAAGAAATGCTTCTGCTGCGTTGGGTATAGGGGTATTTCAGTGGTTAAATATGTGGCTGTGAAATAGTGAAACTAACATTGGACGGTTAAATGAAGATAATTCTGATTCTGCTTTGTTTTCTTGTTTTTCTATGTTCTTCCTAGACAAATAGTACTGCAGCATAGATTATGGGCATTCTATTGGTTTTGATATCCATGAAGAAGTGTTTGCACTATTTTTTTTTAATTGGAAAATAAGAAATATGACATTTCATTAGATAAATGAAGTATTCAACAACACGGGTGGAGAGCTAACCCACAAAGGGGGCGGGTTGTACAAAATCCCTCCAATTAGCTGAAATTTCATAAAAGAGTTGTAGATGAATGCTGGAAGGCATACTATGAACTAAGAATATCGGTATGATCAGATCAACTGTAATCCCTAAACTGATATAAAATGTTTAAAAAATTCAAGTGATTTTTTCCCCACATATATTGAATTGCAAGTTATTTGTTTTTATTTTTATTTTTTATTTTTTATTTTTTTATAGATATAACTGCTTTCATCAGAAAATAATAATGACATTTCTTTTCCAAATTCCAAGTTATTTTTCCAACCATTAACATCAAACTTTTGATTTGTGACTGCTACAGAATAGTTATTAACAATGCGTTTGATAGTTTATTAAAAAAAAGAAAAAGGAAGAATATCCACTTTTCTTTAGTTGAAATCTTTGACTCTATTCTCTACTGTGACTATTCTCTTTTGCCTTCTTCCCCTGGTTGGTTTGGCTGTGTCACTTTTTAGCTCATGAGACTGCAGCCACTACTCATTACCATTCTCTATTTTCTTTTGTTTTACAATGATTCCCTGTTCTTGTTCCACTTTTTTTATCACTTTTTAGCTGGATATTTTGTGAGTGAGACACTTTCATTTCATCTTTTGTATTCTCTCTCATCATACAATCACTTGCCACACCTCTCAACCCACTTCAGTTTCACATTTGACAACTATACTTGTTTAAATAATTATCCTAATTTCTGCCTCGGTTCAGGAGGTCATGATTCAGTTGGATTAGGATCCCTTTTTGTATTTATTTTTGTATGCATTTGTATATTCTTTTATTTTGCTCGACGAAAGCTCGGTTTCTTAAAAAGAAAAAGAAAATTAATTAATCGAAAGGTTGCTTTCATTTGCAGGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGTTGCATGTACTACCATACAAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGTTTGTCCCTTGGAATGATCTTCTTCATATATTGTGAACTGTTTCCAATAAATTTTTCTTGTTTGCAAATGAGCAAGTACTGTTGTTCCCTTCCCTCTCTGATTTAACCTTATTTTCTTCAAACAATGCACTATTTTGATTGCGAACCCAATACGCTGTTGCAAACAGAAGATAAAACAATCTTTTTGCCACCCCCTTTTTTATTATTGTCGCGAGCAATCTATCTCTATTGCTTCTTAAAGTTTCCCTATTCA

mRNA sequence

GTGGTAAGTTAGCATTTCGAACCCTAACACTCTGCTATCTCCTCACTCGGTCAGGTCTGCGTTTCTCTCAGGTTCTCACTCTTAGATTACGGAATTTGACATAGTGGATTGAAAGGAATTTATCGAATTAGAGATGGCGAGCGCAGTAGATGCTGCAGGAGATCCAATTCCTACGTCGGCGGTGCTAATGTCTTCGTCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTGGCATATCTCCAGTGTAAACAAAAGGATCCGAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTTGTCCGTGGTCTTATGGTGCCACCAATTCGTATCTCAGCCCCATTAGCTCAGGTTCACGGTGGAATAACGGACTGTGGAGGTCTTCCACATTCAGAAGGCACGGTGGAATTAATGGATTTGGCGGTGGAGTTGAGCTGTGAAGTGGATCATCTTCCCATAAATTACCTTGGTTTTTCCCTTGATGGTAACCACCACTCCCTCGCCTCTTGGGAACCGTTAGTTGACAAGTCCAAAGCAAAGATTGCCGAGTGGAAAAGCTCCTTTCTTTCAAGGGGACGCCTAACCTTGTTACACTTTGTGCTTAATGGGCTGCCATTGTATTATTTTTCTCTCCTCAAAACGCTGGTGGGCACTATTAATAGTATGGAGAAGTTGCGCATAGATTTTTTTGGTGCTGATTACAAGGCCAGTAGTTATTTGGTTAAGTGGAAAATCACCTCTCTCCCCCCTTGCAATAGTGGTTTGGGGATAGGGTCTCTTAAAAAAAAAATCTTGCTCCTCTCAAAATGGCTGTGGAGATTCTCGATAGAGAGGAAGAATGGGATGACCAATGTGGTACTTAAGTGGTTTGACTCTCTCATCTCAATAGCTGACTTTTGGGGTGTGATTCTCCAAGCCGGAAGTGGGCAGGAGATTTGCTTTGCTTTCAGAAGGATGTGTGAATTGGGGAAACCCTTCATGAAGCTTTTCCAGAAATTTATAGCTTCTCTTAGGAAAGAACCAAAGAGGCGACAGTGGCAAGTTGTCGGCTTGGATTGCTTTGATTGGCAAATTGGATGCTTTTCGCTTGGGGTTAGGTGGATTCCTCTGGTGCTCTCTACTAGAACACTTCTTTTGAAGTTTGGTGGAAATAGGTCGACTATGACTGATACGATTTGGAATTTTAAGATTCTTAAGAAGGTGAAGGTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGTTGCATGTACTACCATACAAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGTTTGTCCCTTGGAATGATCTTCTTCATATATTGTGAACTGTTTCCAATAAATTTTTCTTGTTTGCAAATGAGCAAGTACTGTTGTTCCCTTCCCTCTCTGATTTAACCTTATTTTCTTCAAACAATGCACTATTTTGATTGCGAACCCAATACGCTGTTGCAAACAGAAGATAAAACAATCTTTTTGCCACCCCCTTTTTTATTATTGTCGCGAGCAATCTATCTCTATTGCTTCTTAAAGTTTCCCTATTCA

Coding sequence (CDS)

ATGGCGAGCGCAGTAGATGCTGCAGGAGATCCAATTCCTACGTCGGCGGTGCTAATGTCTTCGTCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTGGCATATCTCCAGTGTAAACAAAAGGATCCGAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTTGTCCGTGGTCTTATGGTGCCACCAATTCGTATCTCAGCCCCATTAGCTCAGGTTCACGGTGGAATAACGGACTGTGGAGGTCTTCCACATTCAGAAGGCACGGTGGAATTAATGGATTTGGCGGTGGAGTTGAGCTGTGAAGTGGATCATCTTCCCATAAATTACCTTGGTTTTTCCCTTGATGGTAACCACCACTCCCTCGCCTCTTGGGAACCGTTAGTTGACAAGTCCAAAGCAAAGATTGCCGAGTGGAAAAGCTCCTTTCTTTCAAGGGGACGCCTAACCTTGTTACACTTTGTGCTTAATGGGCTGCCATTGTATTATTTTTCTCTCCTCAAAACGCTGGTGGGCACTATTAATAGTATGGAGAAGTTGCGCATAGATTTTTTTGGTGCTGATTACAAGGCCAGTAGTTATTTGGTTAAGTGGAAAATCACCTCTCTCCCCCCTTGCAATAGTGGTTTGGGGATAGGGTCTCTTAAAAAAAAAATCTTGCTCCTCTCAAAATGGCTGTGGAGATTCTCGATAGAGAGGAAGAATGGGATGACCAATGTGGTACTTAAGTGGTTTGACTCTCTCATCTCAATAGCTGACTTTTGGGGTGTGATTCTCCAAGCCGGAAGTGGGCAGGAGATTTGCTTTGCTTTCAGAAGGATGTGTGAATTGGGGAAACCCTTCATGAAGCTTTTCCAGAAATTTATAGCTTCTCTTAGGAAAGAACCAAAGAGGCGACAGTGGCAAGTTGTCGGCTTGGATTGCTTTGATTGGCAAATTGGATGCTTTTCGCTTGGGGTTAGGTGGATTCCTCTGGTGCTCTCTACTAGAACACTTCTTTTGAAGTTTGGTGGAAATAGGTCGACTATGACTGATACGATTTGGAATTTTAAGATTCTTAAGAAGGTGAAGGTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGTTGCATGTACTACCATACAAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGTTTGTCCCTTGGAATGA

Protein sequence

MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLSLVRGLMVPPIRISAPLAQVHGGITDCGGLPHSEGTVELMDLAVELSCEVDHLPINYLGFSLDGNHHSLASWEPLVDKSKAKIAEWKSSFLSRGRLTLLHFVLNGLPLYYFSLLKTLVGTINSMEKLRIDFFGADYKASSYLVKWKITSLPPCNSGLGIGSLKKKILLLSKWLWRFSIERKNGMTNVVLKWFDSLISIADFWGVILQAGSGQEICFAFRRMCELGKPFMKLFQKFIASLRKEPKRRQWQVVGLDCFDWQIGCFSLGVRWIPLVLSTRTLLLKFGGNRSTMTDTIWNFKILKKVKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE

Homology

[Close]

BLAST of CmUC03G056160 vs. NCBI nr
Match: XP_004135555.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus] >XP_008445083.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis melo] >KGN65934.1 hypothetical protein Csa_023175 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-25
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. NCBI nr
Match: XP_004135555.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus] >XP_008445083.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis melo] >KGN65934.1 hypothetical protein Csa_023175 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 2.3e-16
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 364 VKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           + +LKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

HSP 2 Score: 128.3 bits (321), Expect = 1.6e-25
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIAN+CR ENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANRCRLENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. NCBI nr
Match: XP_038906805.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispida])

HSP 1 Score: 97.4 bits (241), Expect = 3.0e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 364 VKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           + +LKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQE FEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQETFEKACPLE 106

HSP 2 Score: 128.3 bits (321), Expect = 1.6e-25
Identity = 62/67 (92.54%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAV+AAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCL+KGHQVTRCV
Sbjct: 1  MASAVNAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLEKGHQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. NCBI nr
Match: XP_038893587.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida])

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-16
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 364 VKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           + +LKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKACPLE 106

HSP 2 Score: 125.6 bits (314), Expect = 1.0e-24
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSL 64
          LSL
Sbjct: 61 LSL 63

[Close]

BLAST of CmUC03G056160 vs. NCBI nr
Match: KAA0054071.1 (NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8-B-like [Cucumis melo var. makuwa] >TYJ96852.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8-B-like [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-02
Identity = 28/50 (56.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 277 FAFRRMCELGKPFMKLFQKFIASLRKEPKRRQWQVVGLDCFDWQIGCFSL 327
           FAFRRMC LG PFMKLF  FIASLRKE       V   + ++W  G  SL
Sbjct: 65  FAFRRMCGLGNPFMKLFHIFIASLRKEATVADCWVDINETWNWAFGEASL 114

HSP 2 Score: 124.8 bits (312), Expect = 1.7e-24
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIAN CRSENVAYLQCK+KDPNPEKCLDKG QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. ExPASy Swiss-Prot
Match: Q8LGE7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana OX=3702 GN=At5g18800 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-19
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          M+SAVDA G+PIPTSAVL +S+KHI  +C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1  MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61 LSLVRGL 68
          L L++ L
Sbjct: 61 LGLLKDL 67

HSP 2 Score: 90.5 bits (223), Expect = 4.7e-17
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 366 VLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           +LKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEKVCPL+
Sbjct: 63  LLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]

BLAST of CmUC03G056160 vs. ExPASy Swiss-Prot
Match: Q9SQT4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis thaliana OX=3702 GN=At3g06310 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 366 VLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           +LKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEKVCPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

HSP 2 Score: 91.7 bits (226), Expect = 2.1e-17
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 3  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
          +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 LVRGL 68
          L++ L
Sbjct: 65 LLKDL 69

[Close]

BLAST of CmUC03G056160 vs. ExPASy TrEMBL
Match: A0A0A0LY30 (CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.6e-26
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. ExPASy TrEMBL
Match: A0A0A0LY30 (CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 364 VKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           + +LKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

HSP 2 Score: 128.3 bits (321), Expect = 7.6e-26
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. ExPASy TrEMBL
Match: A0A1S3BBD5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Cucumis melo OX=3656 GN=LOC103488226 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 364 VKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           + +LKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

HSP 2 Score: 125.6 bits (314), Expect = 4.9e-25
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSL 64
          LSL
Sbjct: 61 LSL 63

[Close]

BLAST of CmUC03G056160 vs. ExPASy TrEMBL
Match: A0A5A7UKJ4 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 8-B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00070 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.0e-03
Identity = 28/50 (56.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 277 FAFRRMCELGKPFMKLFQKFIASLRKEPKRRQWQVVGLDCFDWQIGCFSL 327
           FAFRRMC LG PFMKLF  FIASLRKE       V   + ++W  G  SL
Sbjct: 65  FAFRRMCGLGNPFMKLFHIFIASLRKEATVADCWVDINETWNWAFGEASL 114

HSP 2 Score: 124.8 bits (312), Expect = 8.4e-25
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIAN CRSENVAYLQCK+KDPNPEKCLDKG QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. ExPASy TrEMBL
Match: A0A6J1KXR2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita maxima OX=3661 GN=LOC111499155 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.1e-16
Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 364 VKVLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           + +LKDLHQRCTK+MDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKDMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 106

HSP 2 Score: 124.8 bits (312), Expect = 8.4e-25
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          MASAVDAAGDPIPTSAVLMSSSKHIAN CRSENVAYLQCK+KDPNPEKCLDKG QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61 LSLVRGL 68
          LSL++ L
Sbjct: 61 LSLLKDL 67

[Close]

BLAST of CmUC03G056160 vs. TAIR 10
Match: AT5G18800.1 (Cox19-like CHCH family protein )

HSP 1 Score: 99.4 bits (246), Expect = 7.2e-21
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          M+SAVDA G+PIPTSAVL +S+KHI  +C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1  MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61 LSLVRGL 68
          L L++ L
Sbjct: 61 LGLLKDL 67

HSP 2 Score: 90.5 bits (223), Expect = 3.4e-18
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 366 VLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           +LKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEKVCPL+
Sbjct: 63  LLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]

BLAST of CmUC03G056160 vs. TAIR 10
Match: AT5G18800.2 (Cox19-like CHCH family protein )

HSP 1 Score: 99.4 bits (246), Expect = 7.2e-21
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
          M+SAVDA G+PIPTSAVL +S+KHI  +C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1  MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61 LSLVRGL 68
          L L++ L
Sbjct: 61 LGLLKDL 67

HSP 2 Score: 90.5 bits (223), Expect = 3.4e-18
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 366 VLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           +LKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEKVCPL+
Sbjct: 63  LLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]

BLAST of CmUC03G056160 vs. TAIR 10
Match: AT3G06310.1 (Cox19-like CHCH family protein )

HSP 1 Score: 92.4 bits (228), Expect = 8.9e-19
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 366 VLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           +LKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEKVCPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

HSP 2 Score: 91.7 bits (226), Expect = 1.5e-18
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 3  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
          +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 LVRGL 68
          L++ L
Sbjct: 65 LLKDL 69

[Close]

BLAST of CmUC03G056160 vs. TAIR 10
Match: AT3G06310.3 (Cox19-like CHCH family protein )

HSP 1 Score: 92.4 bits (228), Expect = 8.9e-19
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 366 VLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKVCPLE 410
           +LKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEKVCPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

HSP 2 Score: 91.7 bits (226), Expect = 1.5e-18
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 3  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
          +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 LVRGL 68
          L++ L
Sbjct: 65 LLKDL 69

[Close]

BLAST of CmUC03G056160 vs. TAIR 10
Match: AT3G06310.2 (Cox19-like CHCH family protein )

HSP 1 Score: 89.0 bits (219), Expect = 9.8e-18
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 3  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
          +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 L 64
          L
Sbjct: 65 L 65

The following BLAST results are available for this feature:

BLAST of CmUC03G056160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135555.1	1.6e-25	94.03	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]...	[more]
XP_004135555.1	2.3e-16	91.30	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]...	[more]
XP_038906805.1	3.0e-16	89.13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispid...	[more]
XP_038893587.1	1.0e-16	91.30	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa h...	[more]
KAA0054071.1	1.9e-02	56.00	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8-B-like [Cucumis mel...	[more]

Pages

BLAST of CmUC03G056160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGE7	1.0e-19	68.66	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis th...	[more]
Q9SQT4	1.2e-17	88.64	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis th...	[more]

BLAST of CmUC03G056160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY30	7.6e-26	94.03	CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 S...	[more]
A0A0A0LY30	1.1e-16	91.30	CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 S...	[more]
A0A1S3BBD5	1.1e-16	91.30	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Cucumis melo O...	[more]
A0A5A7UKJ4	9.0e-03	56.00	NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 8-B-like OS=Cucumis m...	[more]
A0A6J1KXR2	7.1e-16	86.96	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita...	[more]

Pages

BLAST of CmUC03G056160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18800.1	7.2e-21	68.66	Cox19-like CHCH family protein	[more]
AT5G18800.2	7.2e-21	68.66	Cox19-like CHCH family protein	[more]
AT3G06310.1	8.9e-19	88.64	Cox19-like CHCH family protein	[more]
AT3G06310.3	8.9e-19	88.64	Cox19-like CHCH family protein	[more]
AT3G06310.2	9.8e-18	65.57	Cox19-like CHCH family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010625	CHCH	PFAM	PF06747	CHCH	coord: 374..407 e-value: 1.4E-9 score: 37.9
IPR016680	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8	PANTHER	PTHR13344	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 1..67
IPR016680	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8	PANTHER	PTHR13344	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 365..408
None	No IPR available	PANTHER	PTHR13344:SF2	CHCH-RELATED	coord: 365..408 coord: 1..67
None	No IPR available	PROSITE	PS51808	CHCH	coord: 371..409 score: 14.743086
None	No IPR available	PROSITE	PS51808	CHCH	coord: 26..67 score: 10.769886

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G056160.1	CmUC03G056160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I