CmUC03G050240 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G050240
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	transcription initiation factor TFIID subunit 15b-like
Location	CmU531Chr03: 243677 .. 247614 (-)
RNA-Seq Expression	CmUC03G050240
Synteny	CmUC03G050240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGCTACGGTGGTGGAGGTGGAGGCTACGGAGGCGGTGGTGGTGCAGGCTATGGTGGAAAGGGCGGTGACGGTGGATATGGCGGTGGAGGCCGGGGCGGCGGTAGAGGCTACGGAGGACGAGGCGGCGGCGGAGGCGGAGGCGGAGGCTACGGTGGTCGAGGTTTCTCCAGATTTGTTATTATTATTGCTATTATTTTATCTTAATCGTTCAGTGGCGAGAATCTTTGGGGGGAAGGAAGTCTATTGTTTAGAAAAAATTTAGGATTTTTATCCTTTATTTTTAATTATTGGGGAGACTTTCTTTCTGATTTGTTGGTTCGACGATGTTATTGCTATGTTTTGTTTTGGAAAGGTTAATTTATTGCTATTGGGTGGGGTGTGTGACTTGTATTTGGTAAGTTAATTTCCCGCTATCGGATCCAACTGCGAAGTTAAAGTGAATTGTTTTTGTTTCCCACTAAAGAGTTACATGTTCTTCATCGCCTCAGTTTCTTTATGTGCCTTTTGTTTTGATCCAAACTAGGCGGTGGAGGCGGATATCAAGGAGGAGATCGAGGGGGGCGAGGTGCTGGACGTGGTGGCGGAGGTGGTCGTGGCGGAAGTGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGGTAGGGTTTTCTCTTCTTCGTCTATTACTGAGTTCTTTTGTTTTATTTCATTTGCATGGGTACACTGAACGGCTTCCCATCCCTAAATGCATAAATTGTAGACATTTATATGGGGAACTTGTCTTATGTTTGTTAGCTAAGTTTATGATTGAAACTGATGTTTTGTATTGTTTTGTTTTGTTTTGTTTTTGCCATATAGCTGTGGAAATTTGAACTTTGCTAGAAGAGTGGAGTGTAACAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGTGATCGAAGTGGTGGAGGTGGCGGCGGCGGAGGTGGCGGCTATAATAGAGGTGGGTCTGATGGGGGTTATGGCGTCAATCGTAATGGCAGAGGCGGTAGTTTCCATGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAACAGAGGTGGTAATTCTTATGGTGGTCACCAAGGAGGAGAAGATAGTGGGTACAGTCAGGTTCCCCCATCCTCGGCACCCTCATCTGGTGGTCTTGGTGGCTCTTATCCACCATCTTACCATGCTGGAAGTGCAGACTATGGGACTGATGCAGTTCCTCCTCCTGCAAGCTACAGTGGAACTACATATCCTCCAACCTATGGTGGTCCTACTGGTGGCTATGGTGGTGATAATCTAGGTGATGGGCGTGGTGCTGCTGGTCGGAGTGGGCCATCATCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCAGCAGCAGAGCCTGCACAGGTTAAACAGTGTGATGATAATTGTGATGATTCGTGCGATAATTCTAGAATCTATGTATCTAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAATTATTTGGCGGAATTGGTCAAGTAAGTAACCTTCTCTTAGGCTATATTCTGTTGCTTGTGGTATTCGATCCTTGTTGGAGTGAGTACCATGTGATCGTGAATTCTTTTTTAGACAGTGTATAAACTTTCAAACTATATTTCCATGTTTAGAAAGTTGACTTTTGATTACTAGGCAATTGTTTGTGATATATGAAGCTCTTATAGAGCTAGTTCTATGCCGCTTGCCAATGTGTCTGCAATTGATATCCTGTCTTCTCTAAAATGTGTCAGTATATGGTATTCCTGATTGTTAGTTCATCCTTTTTAAATAATGAGTATACTTTCATCTGTTTTCTAAATGAACGATCTTTTCATGTTCAGAAGTTATGTTATGAATTCTGTTTGAGACATTTGTTTATGATTTGGAGGTTATGTAGGTAGAGTTCTATTCTTATTGGCAATAAAATAAAGTGGATTTTGTTTCTCTAGTTCTGAAGATTCTTTTTTCAGCATTGACTTTTGCATATAAAAAATTGAACTGTTTAATTGAAGCCTTTTTTGCATTTTCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCTGCAGCGCATTCTGCTGGCGGTTTCTATAACAGTAACTACTGTGCTTCTATAGTATTATAATAACAATATTAGATATTATGGTTTTAATTTTAGTTTGAATCTCTCTATGATATCATCTTTCAATGATCATATTTTTGTATCCGCAGATTATGATTTGAGAGGCTATAGCATTAATGTTGCAATGGCTGAGAAGTCTGCACCAAGGGCTCCACCTACATACAACCATGGGTACTTGCTTCACCATTATTCTTTCAAAACAAATTGAGAAATCCGAGTACAAAGTTTAGGCATGCATATATCTTAAAATATGTACTTATTAGTTCTTTCTTGGTGTTTGCTGATAAGGCTGAGAAATTTGCAATTGTAATTACCTCTTTCTTATACACACACAGAGGCAGAAAAAGATTTTTGTTGGCAGAATTAGGACAGGACAAGTTACAGTTTTGTCCAATATTTGATACTGTTTGATATCCCGAGTTAATATTATCCAGGAACTATCAACGATATTACTTTGTTTTTATTTTTGACTCTGAGATCCAAACATGTTTGAGAATTAGGCTTTGAATTAAATTAGCCTGTCATACTCATTTTAGTAGAAATGTTATGTCTTAGTCTTTTTACTGTTTAGAATGCTATTAGTCTTTTAGTAGGTTACCCACCCATTTCCTTGTTCTTGATTGTGGGGGTGGATATTTTTATCTTCTCCATTTGTGCCAATACTCTTATACTAAGATATTTTAACTGATTCATTTATATTATTATATAATGAAGAATACTTGGGTGTATCATGGACTGCACCCATCTTTTCGCAGCCCACTTCAACCACAATAGAAAAAATTAAAAAATGTTGAGAAAAAGAGGAAAGAAGAGTTGCTAACATGTAGCAAACTGTGATTTGACAATTGGGTTCAACCACAATAGAAAAAATTAAAAAATGTTGAGAAAAAGAGGAAAGAAGAGTTGCTAACATGTAGCAAACTGTGATTTGACAATTGGGTTGGATGAGTATAGATGGGTGTAGCTTAGGATGCACCCAACCTTTTCATTTCATATAAATTATTATGCTTTAGAATTTTTTGTCTTGCACTGCATAAACTGTCCTTTCATGTTGCAGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGACAAGCGCAGAGATAGCTATAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCCCGTCCTTACTGAGAGATTCGGCATTGAGCATTTTATGTAATGGGAATTGTGATCTTAGTGTTTTAGTTTTGTTCCATGGCTGGATTCTTGAATTGGAGACCAAAGAGGTAGGTTGTTCACTTTCTATGGGCAAGAGACCTCTTTGCTCCTTTTTATCTATAGTGGTACCTGGAGGATTATAATCTTGCTGGGGCTTGAGATTAATCTAGTTGTGTGAATGTTTTTTTTTATAGAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGGTGAGTGCTTCTCTTTCCATAACCATTCTTAGAAATTATGCACTGGGTGCTCTGATGTATAAGCTCCACCTGATCTCAGCTACATCCTTGTTGGATATGATGCAAGCATATCTTAG

mRNA sequence

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGCTACGGTGGTGGAGGTGGAGGCTACGGAGGCGGTGGTGGTGCAGGCTATGGTGGAAAGGGCGGTGACGGTGGATATGGCGGTGGAGGCCGGGGCGGCGGTAGAGGCTACGGAGGACGAGGCGGCGGCGGAGGCGGAGGCGGAGGCTACGGTGGTCGAGGCGGTGGAGGCGGATATCAAGGAGGAGATCGAGGGGGGCGAGGTGCTGGACGTGGTGGCGGAGGTGGTCGTGGCGGAAGTGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTGGAGTGTAACAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGTGATCGAAGTGGTGGAGGTGGCGGCGGCGGAGGTGGCGGCTATAATAGAGGTGGGTCTGATGGGGGTTATGGCGTCAATCGTAATGGCAGAGGCGGTAGTTTCCATGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAACAGAGGTGGTAATTCTTATGGTGGTCACCAAGGAGGAGAAGATAGTGGGTACAGTCAGGTTCCCCCATCCTCGGCACCCTCATCTGGTGGTCTTGGTGGCTCTTATCCACCATCTTACCATGCTGGAAGTGCAGACTATGGGACTGATGCAGTTCCTCCTCCTGCAAGCTACAGTGGAACTACATATCCTCCAACCTATGGTGGTCCTACTGGTGGCTATGGTGGTGATAATCTAGGTGATGGGCGTGGTGCTGCTGGTCGGAGTGGGCCATCATCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCAGCAGCAGAGCCTGCACAGGTTAAACAGTGTGATGATAATTGTGATGATTCGTGCGATAATTCTAGAATCTATGTATCTAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAATTATTTGGCGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCTGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGCTATAGCATTAATGTTGCAATGGCTGAGAAGTCTGCACCAAGGGCTCCACCTACATACAACCATGGTTCTTTCTTGGTGTTTGCTGATAAGGCTGAGAAATTTGCAATTGTAATTACCTCTTTCTTATACACACACAGAGGCAGAAAAAGATTTTTGTTGGCAGAATTAGGACAGGACAAGTTACAGTTTTGTCCAATATTTGATACTATCCAAACATTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGACAAGCGCAGAGATAGCTATAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCCCGTCCTTACTGAGAGATTCGGCATTGAGCATTTTATAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGCTACATCCTTGTTGGATATGATGCAAGCATATCTTAG

Coding sequence (CDS)

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGCTACGGTGGTGGAGGTGGAGGCTACGGAGGCGGTGGTGGTGCAGGCTATGGTGGAAAGGGCGGTGACGGTGGATATGGCGGTGGAGGCCGGGGCGGCGGTAGAGGCTACGGAGGACGAGGCGGCGGCGGAGGCGGAGGCGGAGGCTACGGTGGTCGAGGCGGTGGAGGCGGATATCAAGGAGGAGATCGAGGGGGGCGAGGTGCTGGACGTGGTGGCGGAGGTGGTCGTGGCGGAAGTGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTGGAGTGTAACAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGTGATCGAAGTGGTGGAGGTGGCGGCGGCGGAGGTGGCGGCTATAATAGAGGTGGGTCTGATGGGGGTTATGGCGTCAATCGTAATGGCAGAGGCGGTAGTTTCCATGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAACAGAGGTGGTAATTCTTATGGTGGTCACCAAGGAGGAGAAGATAGTGGGTACAGTCAGGTTCCCCCATCCTCGGCACCCTCATCTGGTGGTCTTGGTGGCTCTTATCCACCATCTTACCATGCTGGAAGTGCAGACTATGGGACTGATGCAGTTCCTCCTCCTGCAAGCTACAGTGGAACTACATATCCTCCAACCTATGGTGGTCCTACTGGTGGCTATGGTGGTGATAATCTAGGTGATGGGCGTGGTGCTGCTGGTCGGAGTGGGCCATCATCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCAGCAGCAGAGCCTGCACAGGTTAAACAGTGTGATGATAATTGTGATGATTCGTGCGATAATTCTAGAATCTATGTATCTAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAATTATTTGGCGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCTGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGCTATAGCATTAATGTTGCAATGGCTGAGAAGTCTGCACCAAGGGCTCCACCTACATACAACCATGGTTCTTTCTTGGTGTTTGCTGATAAGGCTGAGAAATTTGCAATTGTAATTACCTCTTTCTTATACACACACAGAGGCAGAAAAAGATTTTTGTTGGCAGAATTAGGACAGGACAAGTTACAGTTTTGTCCAATATTTGATACTATCCAAACATTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGACAAGCGCAGAGATAGCTATAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCCCGTCCTTACTGAGAGATTCGGCATTGAGCATTTTATAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGCTACATCCTTGTTGGATATGATGCAAGCATATCTTAG

Protein sequence

MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPSYHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGSFLVFADKAEKFAIVITSFLYTHRGRKRFLLAELGQDKLQFCPIFDTIQTLVVVEVDMEVVETSAEIAIGTEALDLIDISMVEIDPVLTERFGIEHFIGRRIISKLLVAKVGVDVFSYILVGYDASIS

Homology

[Close]

BLAST of CmUC03G050240 vs. NCBI nr
Match: KAA0060008.1 (transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis melo var. makuwa] >TYJ97266.1 transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 771.2 bits (1990), Expect = 6.4e-219
Identity = 483/587 (82.28%), Postives = 490/587 (83.48%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGR---- 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGGGGR    
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGG-GGYGGRGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GGGRGYGGRGGGGGGG GG GG GG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRN 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RN
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGG 300
           SYH GSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSN 360
           YNAGGRGGYNAGGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSN
Sbjct: 301 YNAGGRGGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSN 360

Query: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420
           LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA
Sbjct: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420

Query: 421 AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGSF--LVFADKAEKFAIVITSFLY 480
           AHSAG    +YDLRGYSINVAMAEKSAPRAPPTYNHG +  LV   +AEK          
Sbjct: 421 AHSAG----DYDLRGYSINVAMAEKSAPRAPPTYNHGFYSPLVSYARAEK---------- 480

Query: 481 THRGRKRFLLAELGQDKLQFCPIFDTIQTLVVVEVDMEVVETSAEIAIGTEALDLIDISM 540
                                                      AEIA GTEALDLIDISM
Sbjct: 481 ------------------------------------------GAEIATGTEALDLIDISM 526

Query: 541 VEIDPVLTERFGIEHFIGRRIISKLLVAKVGVDVFSYILVGYDASIS 572
           VEID VLTERFGIEHFIGRRIISKLLVAKVGVDVFSY+LVG DASIS
Sbjct: 541 VEIDRVLTERFGIEHFIGRRIISKLLVAKVGVDVFSYVLVGSDASIS 526

[Close]

BLAST of CmUC03G050240 vs. NCBI nr
Match: XP_008457317.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis melo])

HSP 1 Score: 703.0 bits (1813), Expect = 2.1e-198
Identity = 423/457 (92.56%), Postives = 426/457 (93.22%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGR---- 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGGGGR    
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGG-GGYGGRGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GGGRGYGGRGGGGGGG GG GG GG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRN 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RN
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGG 300
           SYH GSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSN 360
           YNAGGRGGYNAGGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSN
Sbjct: 301 YNAGGRGGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSN 360

Query: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420
           LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA
Sbjct: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420

Query: 421 AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 444
           AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 452

[Close]

BLAST of CmUC03G050240 vs. NCBI nr
Match: XP_011658817.1 (transcription initiation factor TFIID subunit 15b [Cucumis sativus])

HSP 1 Score: 703.0 bits (1813), Expect = 2.1e-198
Identity = 420/456 (92.11%), Postives = 425/456 (93.20%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGY--GGGGGGYGGGGGAGYGGKGGDGGYGGGGR----- 60
           MSGMYDQGGDAAPSYGAPGGGGGY  GGGGGGYGGGGGAGYGGKGGDGGYGGGGR     
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  -GGGRGYGGRGGGG-----GGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
            GGGRGYGGRGGGG     GGGGGY G   GGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
Sbjct: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNG 180
           WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS  GGGGGGGGYNRGG D GYG +RNG
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS--GGGGGGGGYNRGGGDSGYGGSRNG 180

Query: 181 RGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPS 240
           RGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPPS
Sbjct: 181 RGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPS 240

Query: 241 YHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGY 300
           YH GS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAA R GPS+GYDGGY
Sbjct: 241 YHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGY 300

Query: 301 NAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           NAGGRGGYNAGGR GGSYNASGGR GGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 NAGGRGGYNAGGR-GGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 444
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHG 453

[Close]

BLAST of CmUC03G050240 vs. NCBI nr
Match: XP_038894092.1 (transcription initiation factor TFIID subunit 15b [Benincasa hispida])

HSP 1 Score: 701.8 bits (1810), Expect = 4.8e-198
Identity = 417/447 (93.29%), Postives = 423/447 (94.63%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGYGGGGGAGYGGKGGDGGYGGGGR--GGGRG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG G GGG   GGKGGDGGYGGGGR  GGGRG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGG---GGKGGDGGYGGGGRGGGGGRG 60

Query: 61  YGGRGGGGGG--GGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCG 120
           YGGRGGGGGG  GG  GG GGGGGYQGGDRGGRGAGR GGGGRGGSGRDGDWVCPNPGCG
Sbjct: 61  YGGRGGGGGGGYGGRGGGGGGGGGYQGGDRGGRGAGRSGGGGRGGSGRDGDWVCPNPGCG 120

Query: 121 NLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGR 180
           NLNFARRVECNKCGAPSPGGASDRS  GGGGGGGGYNRGG+DGGYG NRNGRGGS+HGGR
Sbjct: 121 NLNFARRVECNKCGAPSPGGASDRS--GGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGR 180

Query: 181 SGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPSYHAGSADYG 240
           SG HDGGRNEGGNRGGNS+GGHQGGEDS Y QVPPSSAPSSGGL GSYPPSYHAG+ADYG
Sbjct: 181 SGAHDGGRNEGGNRGGNSFGGHQGGEDSRYGQVPPSSAPSSGGLAGSYPPSYHAGTADYG 240

Query: 241 TDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGYN 300
           TDAVPPPASYSGTTYPP+YG PTGGYGGD+LGDGRGAAGR GPS GYDGGYNAGGRGGYN
Sbjct: 241 TDAVPPPASYSGTTYPPSYGAPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYN 300

Query: 301 AGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDEL 360
           AGGRGGGSYNASGGRGGGYGSTP AEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDEL
Sbjct: 301 AGGRGGGSYNASGGRGGGYGSTPTAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDEL 360

Query: 361 RELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNN 420
           RELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNN
Sbjct: 361 RELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNN 420

Query: 421 YDLRGYSINVAMAEKSAPRAPPTYNHG 444
           YDLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 YDLRGYSINVAMAEKSAPRAPPTYNHG 442

[Close]

BLAST of CmUC03G050240 vs. NCBI nr
Match: XP_016902120.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis melo])

HSP 1 Score: 698.4 bits (1801), Expect = 5.3e-197
Identity = 406/446 (91.03%), Postives = 409/446 (91.70%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGRGGGR 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGGGGRGGG 
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG- 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
                             GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN
Sbjct: 61  ------------------GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRS 180
           LNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RNGRGGSFHGGRS
Sbjct: 121 LNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180

Query: 181 GTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPSYHAGSADYGT 240
           GTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPPSYH GSADYGT
Sbjct: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGT 240

Query: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGYNA 300
           DAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGGYNAGGRGGYNA
Sbjct: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNA 300

Query: 301 GGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360
           GGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR
Sbjct: 301 GGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360

Query: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420
           ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY
Sbjct: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420

Query: 421 DLRGYSINVAMAEKSAPRAPPTYNHG 444
           DLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 DLRGYSINVAMAEKSAPRAPPTYNHG 422

[Close]

BLAST of CmUC03G050240 vs. ExPASy Swiss-Prot
Match: Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-82
Identity = 255/442 (57.69%), Postives = 285/442 (64.48%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGGYGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGR 60
           M+GMY+Q   GG   PSY           GG GYGGGGG G    GGD GYGG G  GG 
Sbjct: 1   MAGMYNQDGGGGAPIPSY-----------GGDGYGGGGGYG----GGDAGYGGRGASGGG 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
            YGGRGG GGGGG     GGGGGYQGGDRGGRG+        GG GRDGDW CPNP CGN
Sbjct: 61  SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRS 180
           +NFARRVECNKCGA +P G    S G    GGGGY+RGG D   G    GRGG    GRS
Sbjct: 121 VNFARRVECNKCGALAPSGT---SSGANDRGGGGYSRGGGDSDRG---GGRGGRNDSGRS 180

Query: 181 GTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSA--PSSGGLGGSYPPSYHAGSADY 240
             ++  R +GG+R G SYG     E+  Y Q PP +A  PS  G  GSYPP        Y
Sbjct: 181 --YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP-----PTGY 240

Query: 241 GTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGY 300
           G +AVPPP SYSG   PP+YGGP GGYG D    G    GR G S GYDGG         
Sbjct: 241 GMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG--------- 300

Query: 301 NAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDE 360
           +A  R   SY               A   +VKQCD +CDD+CDN+RIY+SNLPPDVT DE
Sbjct: 301 SAPRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDE 360

Query: 361 LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYN 420
           L++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAGGF+N
Sbjct: 361 LKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFN 377

Query: 421 NYDLRGYSINVAMAEKSAPRAP 438
           NY++RG  I+V MAEKSAPRAP
Sbjct: 421 NYEMRGNKISVTMAEKSAPRAP 377

[Close]

BLAST of CmUC03G050240 vs. ExPASy TrEMBL
Match: A0A5A7UXQ0 (Transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00600 PE=4 SV=1)

HSP 1 Score: 771.2 bits (1990), Expect = 3.1e-219
Identity = 483/587 (82.28%), Postives = 490/587 (83.48%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGR---- 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGGGGR    
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGG-GGYGGRGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GGGRGYGGRGGGGGGG GG GG GG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRN 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RN
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGG 300
           SYH GSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSN 360
           YNAGGRGGYNAGGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSN
Sbjct: 301 YNAGGRGGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSN 360

Query: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420
           LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA
Sbjct: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420

Query: 421 AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGSF--LVFADKAEKFAIVITSFLY 480
           AHSAG    +YDLRGYSINVAMAEKSAPRAPPTYNHG +  LV   +AEK          
Sbjct: 421 AHSAG----DYDLRGYSINVAMAEKSAPRAPPTYNHGFYSPLVSYARAEK---------- 480

Query: 481 THRGRKRFLLAELGQDKLQFCPIFDTIQTLVVVEVDMEVVETSAEIAIGTEALDLIDISM 540
                                                      AEIA GTEALDLIDISM
Sbjct: 481 ------------------------------------------GAEIATGTEALDLIDISM 526

Query: 541 VEIDPVLTERFGIEHFIGRRIISKLLVAKVGVDVFSYILVGYDASIS 572
           VEID VLTERFGIEHFIGRRIISKLLVAKVGVDVFSY+LVG DASIS
Sbjct: 541 VEIDRVLTERFGIEHFIGRRIISKLLVAKVGVDVFSYVLVGSDASIS 526

[Close]

BLAST of CmUC03G050240 vs. ExPASy TrEMBL
Match: A0A0A0LYC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 1.0e-198
Identity = 420/456 (92.11%), Postives = 425/456 (93.20%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGY--GGGGGGYGGGGGAGYGGKGGDGGYGGGGR----- 60
           MSGMYDQGGDAAPSYGAPGGGGGY  GGGGGGYGGGGGAGYGGKGGDGGYGGGGR     
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  -GGGRGYGGRGGGG-----GGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
            GGGRGYGGRGGGG     GGGGGY G   GGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
Sbjct: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNG 180
           WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS  GGGGGGGGYNRGG D GYG +RNG
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS--GGGGGGGGYNRGGGDSGYGGSRNG 180

Query: 181 RGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPS 240
           RGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPPS
Sbjct: 181 RGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPS 240

Query: 241 YHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGY 300
           YH GS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAA R GPS+GYDGGY
Sbjct: 241 YHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGY 300

Query: 301 NAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           NAGGRGGYNAGGR GGSYNASGGR GGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 NAGGRGGYNAGGR-GGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 444
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHG 453

[Close]

BLAST of CmUC03G050240 vs. ExPASy TrEMBL
Match: A0A1S3C4S9 (transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 1.0e-198
Identity = 423/457 (92.56%), Postives = 426/457 (93.22%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGR---- 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGGGGR    
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGG-GGYGGRGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GGGRGYGGRGGGGGGG GG GG GG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRN 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RN
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHAGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGG 300
           SYH GSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSN 360
           YNAGGRGGYNAGGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSN
Sbjct: 301 YNAGGRGGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSN 360

Query: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420
           LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA
Sbjct: 361 LPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSA 420

Query: 421 AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 444
           AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 AHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 452

[Close]

BLAST of CmUC03G050240 vs. ExPASy TrEMBL
Match: A0A1S4E2C0 (transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 2.6e-197
Identity = 406/446 (91.03%), Postives = 409/446 (91.70%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGRGGGR 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGGGGRGGG 
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG- 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
                             GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN
Sbjct: 61  ------------------GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRS 180
           LNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RNGRGGSFHGGRS
Sbjct: 121 LNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180

Query: 181 GTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPSYHAGSADYGT 240
           GTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPPSYH GSADYGT
Sbjct: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGT 240

Query: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGYNA 300
           DAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGGYNAGGRGGYNA
Sbjct: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNA 300

Query: 301 GGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360
           GGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR
Sbjct: 301 GGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360

Query: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420
           ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY
Sbjct: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420

Query: 421 DLRGYSINVAMAEKSAPRAPPTYNHG 444
           DLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 DLRGYSINVAMAEKSAPRAPPTYNHG 422

[Close]

BLAST of CmUC03G050240 vs. ExPASy TrEMBL
Match: A0A1S4E1L8 (transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 9.7e-197
Identity = 403/446 (90.36%), Postives = 406/446 (91.03%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGAGYGGKGGDGGYGGGGRGGGR 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGGAGYGGKGGDGGYGG       
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGG------- 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
                          GGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN
Sbjct: 61  ---------------GGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRS 180
           LNFARRVECNKCGAPSPGGASDR    GGGGGGGYNRGG D GYG +RNGRGGSFHGGRS
Sbjct: 121 LNFARRVECNKCGAPSPGGASDR----GGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180

Query: 181 GTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLGGSYPPSYHAGSADYGT 240
           GTHDGGRNEGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSGGL GSYPPSYH GSADYGT
Sbjct: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGT 240

Query: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGYNA 300
           DAVPPPASYSGTTYPPTYGGPTGGYGGD+LGDGRGAAGR GPS GYDGGYNAGGRGGYNA
Sbjct: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNA 300

Query: 301 GGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360
           GGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR
Sbjct: 301 GGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360

Query: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420
           ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY
Sbjct: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 419

Query: 421 DLRGYSINVAMAEKSAPRAPPTYNHG 444
           DLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 DLRGYSINVAMAEKSAPRAPPTYNHG 419

[Close]

BLAST of CmUC03G050240 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 308.9 bits (790), Expect = 8.4e-84
Identity = 255/442 (57.69%), Postives = 285/442 (64.48%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGGYGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGR 60
           M+GMY+Q   GG   PSY           GG GYGGGGG G    GGD GYGG G  GG 
Sbjct: 1   MAGMYNQDGGGGAPIPSY-----------GGDGYGGGGGYG----GGDAGYGGRGASGGG 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
            YGGRGG GGGGG     GGGGGYQGGDRGGRG+        GG GRDGDW CPNP CGN
Sbjct: 61  SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRS 180
           +NFARRVECNKCGA +P G    S G    GGGGY+RGG D   G    GRGG    GRS
Sbjct: 121 VNFARRVECNKCGALAPSGT---SSGANDRGGGGYSRGGGDSDRG---GGRGGRNDSGRS 180

Query: 181 GTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSA--PSSGGLGGSYPPSYHAGSADY 240
             ++  R +GG+R G SYG     E+  Y Q PP +A  PS  G  GSYPP        Y
Sbjct: 181 --YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP-----PTGY 240

Query: 241 GTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGY 300
           G +AVPPP SYSG   PP+YGGP GGYG D    G    GR G S GYDGG         
Sbjct: 241 GMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG--------- 300

Query: 301 NAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDE 360
           +A  R   SY               A   +VKQCD +CDD+CDN+RIY+SNLPPDVT DE
Sbjct: 301 SAPRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDE 360

Query: 361 LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYN 420
           L++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAGGF+N
Sbjct: 361 LKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFN 377

Query: 421 NYDLRGYSINVAMAEKSAPRAP 438
           NY++RG  I+V MAEKSAPRAP
Sbjct: 421 NYEMRGNKISVTMAEKSAPRAP 377

[Close]

BLAST of CmUC03G050240 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 308.9 bits (790), Expect = 8.4e-84
Identity = 255/442 (57.69%), Postives = 285/442 (64.48%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGGYGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGR 60
           M+GMY+Q   GG   PSY           GG GYGGGGG G    GGD GYGG G  GG 
Sbjct: 1   MAGMYNQDGGGGAPIPSY-----------GGDGYGGGGGYG----GGDAGYGGRGASGGG 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
            YGGRGG GGGGG     GGGGGYQGGDRGGRG+        GG GRDGDW CPNP CGN
Sbjct: 61  SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGGGGGYNRGGSDGGYGVNRNGRGGSFHGGRS 180
           +NFARRVECNKCGA +P G    S G    GGGGY+RGG D   G    GRGG    GRS
Sbjct: 121 VNFARRVECNKCGALAPSGT---SSGANDRGGGGYSRGGGDSDRG---GGRGGRNDSGRS 180

Query: 181 GTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSA--PSSGGLGGSYPPSYHAGSADY 240
             ++  R +GG+R G SYG     E+  Y Q PP +A  PS  G  GSYPP        Y
Sbjct: 181 --YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP-----PTGY 240

Query: 241 GTDAVPPPASYSGTTYPPTYGGPTGGYGGDNLGDGRGAAGRSGPSSGYDGGYNAGGRGGY 300
           G +AVPPP SYSG   PP+YGGP GGYG D    G    GR G S GYDGG         
Sbjct: 241 GMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG--------- 300

Query: 301 NAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDE 360
           +A  R   SY               A   +VKQCD +CDD+CDN+RIY+SNLPPDVT DE
Sbjct: 301 SAPRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDE 360

Query: 361 LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYN 420
           L++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAGGF+N
Sbjct: 361 LKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFN 377

Query: 421 NYDLRGYSINVAMAEKSAPRAP 438
           NY++RG  I+V MAEKSAPRAP
Sbjct: 421 NYEMRGNKISVTMAEKSAPRAP 377

The following BLAST results are available for this feature:

BLAST of CmUC03G050240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060008.1	6.4e-219	82.28	transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis melo var. ...	[more]
XP_008457317.1	2.1e-198	92.56	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis...	[more]
XP_011658817.1	2.1e-198	92.11	transcription initiation factor TFIID subunit 15b [Cucumis sativus]	[more]
XP_038894092.1	4.8e-198	93.29	transcription initiation factor TFIID subunit 15b [Benincasa hispida]	[more]
XP_016902120.1	5.3e-197	91.03	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis...	[more]

BLAST of CmUC03G050240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KD0	1.2e-82	57.69	Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmUC03G050240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXQ0	3.1e-219	82.28	Transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo var...	[more]
A0A0A0LYC4	1.0e-198	92.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1	[more]
A0A1S3C4S9	1.0e-198	92.56	transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=...	[more]
A0A1S4E2C0	2.6e-197	91.03	transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=...	[more]
A0A1S4E1L8	9.7e-197	90.36	transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=...	[more]

BLAST of CmUC03G050240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58470.1	8.4e-84	57.69	TBP-associated factor 15B	[more]
AT5G58470.2	8.4e-84	57.69	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 106..132 e-value: 1.8E-7 score: 40.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 104..135 e-value: 4.5E-8 score: 32.3
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 108..129
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 104..135 score: 10.150199
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 341..427 e-value: 4.9E-9 score: 46.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 342..371 e-value: 4.2E-6 score: 26.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 340..431 score: 14.010044
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 339..427 e-value: 7.3E-16 score: 60.2
None	No IPR available	GENE3D	4.10.1060.10		coord: 102..136 e-value: 3.7E-15 score: 56.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..279
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 2..288
None	No IPR available	PANTHER	PTHR12999	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	coord: 290..443 coord: 2..288
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 290..443
None	No IPR available	CDD	cd12280	RRM_FET	coord: 342..428 e-value: 2.89632E-36 score: 128.199
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 97..136
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 336..432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G050240.1	CmUC03G050240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016020	membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding