CmUC02G048560 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G048560
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Location	CmU531Chr02: 36153952 .. 36156100 (-)
RNA-Seq Expression	CmUC02G048560
Synteny	CmUC02G048560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCGATCGGATCGTTGGTTCCCAGAGAAGTAGTTGATCGATGGCAAGGATTTTTGTTCGTCGTCGTCAGCTTCTTTTTCCTTCTGTTATTTCTCTATGCCGCCATCATTTCCAAGCTTCTTCCACCTTCCAACAACGCCTTCTTATCTGCTATTCAGAATGACCGGTAACTTTTATCTTGATTTTAGAGAATTATCGTTTAATTGCTCAATTTGTTGTGTCTAGTCCATAATTCGATTTCTTCTTGTTATTCTGAAGAAAAAAAAATGTGTTGAAGTGTTAGTATTAGTTTCTGATTTGTTAATTGAATTCTGGGTTTGATCTTGATTTGGTGGGGCGGGGGGGATTGGCCGCCGACTGAAGATCAAAGCAAATCTGATTAGTTGATCAGTGTGAAGGAAGATGGAAAAAAAAGGGAGCCGAACAGAAACCAAATACTAAAACTTGATTTGTTTTTCCTCTCTAATAGAACTTTTTTTAAAGAAATGGGTACGCAGAGTACAGGGAAATCATTGAAGTTTGAGAATGAAAGCCAGTGAATAAAATAGGCCCACTAAGGAGTGTTTTCAAATTCATATGATCTGGTTGGGTACCATCTCTTTTTTGGGTTTTTGGTTTTTTAAAATTTAGCCTATTTTCCCATTTTCTTATAAAAATCAAAAGTTGTTGGCTTTAATTTTCAAAAATCAAAAATAAAAAAAACCAAATGATTACTAAACGGGACCTTGATTTTTTGTTTTTAGTTTTTAAAAGTTATTCTTGCTTTCTCACAATTTCTTAATCATAGTTTTCACATTTACTAAGTAAATATTTGAATTTTTAGCTAATTTACAAAAACAAAAACCAAGTTTTTGAAAACTATATTTTTTTTTAGTTTTTAAAATTTGGCTTTATTTTGAAAACACTCACAAAACGTAGACAACAAAACATTGGAATCAATAGATCACAGTATTATTTATAAGTGTAATTTTCCAAAACAAAACAATTACCGATGGAGACTGCAGTACACTTTCTTTTAGATGTCGTGTGAATCATGTTGAAACTGGTTAATGAGATATCATTCATAACTCTACTGGTTTGATATTCAAACTACAATAATATATATGAATGACAAAATGATATCTGATCCATACTGGGGATGAGTATGGATGCATCTGAAAGCTTGCCTTTGAAGCAAACTTTGTTCAAAGGACATTTTTATGGAACTGATTTAGTGTTAGTGCCTTTGATCTCTTGAAAAGATCAACCCTAAAGAAACTAATATGGTAACTTGTTTCCTTGCCTAGTACTGTGTAAGACCCTAGTTATGGAAATAGTAGGACTATTAGTAAAATATTAGTATGCTTGTTAGAAGGAGCATTTGAGTAAATAGCTAGTAAGTTGGTTAGGGCTTAATAGAGGTAGAAGTTGAGAGGGAGGGGTGAAGAATTTTGTGGGATTTCCTTAGTTGGGAATTTGGGAGAGTCTAGCCCTCTCGAAGGACTAGTGGTTACCTTGTTACTTGTACTTATGATATTATAGCATCTTTCTTCATATTTTCATATCTCAGTGTTCTTGAGTTTGCTTAGTTTGCTAAGTGTTCTTGAATGTGTTCTTGTTAGATTAACAATAACATTTGTTTACAATGCCTTAATAGGTATTATTGTCTCCTGGTGCCCTTGACATTGCCTATCCTTTACGTCGCGGTTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGATCATGTAGTCGTAAGAAAGACGAAGGTTTTGAACAAGGTTGAGTGTCTAAATCTTTGATTGAATTACAATATGATGTGTTTGGAAGTTTCAATACCTAAGGCGATGAAGGATGTACGGTCGAATTACTGGAGACATACATGATGATCGTGCCGAGGGACTTCCACATCGGCTGAGTATCTTGGACCGATTTTTGTAAAGGGTTGTTACCATAAAATATGCACCCATTGTGGTTGAACGATGAGGATATTAGGTATTCAAATTAAACCGAAAGGCCAAACAGTGATTGAACACAAGCTCTATGAACTAATCTTGGCAAAACCAACTTGGCTTCTGGTTGTTTTTATATGGACAATCTCGAAATTTGATTTTGTGACGAAAAAGTATCTACTCCAGAGCTACCTATTTACTTCGGAT

mRNA sequence

ATGAGTTCGATCGGATCGTTGGTTCCCAGAGAAGTAGTTGATCGATGGCAAGGATTTTTGTTCGTCGTCGTCAGCTTCTTTTTCCTTCTGTTATTTCTCTATGCCGCCATCATTTCCAAGCTTCTTCCACCTTCCAACAACGCCTTCTTATCTGCTATTCAGAATGACCGGTATTATTGTCTCCTGGTGCCCTTGACATTGCCTATCCTTTACGTCGCGGTTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGATCATGTAGTCGTAAGAAAGACGAAGGTTTTGAACAAGGTTGAGTGTCTAAATCTTTGATTGAATTACAATATGATGTGTTTGGAAGTTTCAATACCTAAGGCGATGAAGGATGTACGGTCGAATTACTGGAGACATACATGATGATCGTGCCGAGGGACTTCCACATCGGCTGAGTATCTTGGACCGATTTTTGTAAAGGGTTGTTACCATAAAATATGCACCCATTGTGGTTGAACGATGAGGATATTAGGTATTCAAATTAAACCGAAAGGCCAAACAGTGATTGAACACAAGCTCTATGAACTAATCTTGGCAAAACCAACTTGGCTTCTGGTTGTTTTTATATGGACAATCTCGAAATTTGATTTTGTGACGAAAAAGTATCTACTCCAGAGCTACCTATTTACTTCGGAT

Coding sequence (CDS)

ATGAGTTCGATCGGATCGTTGGTTCCCAGAGAAGTAGTTGATCGATGGCAAGGATTTTTGTTCGTCGTCGTCAGCTTCTTTTTCCTTCTGTTATTTCTCTATGCCGCCATCATTTCCAAGCTTCTTCCACCTTCCAACAACGCCTTCTTATCTGCTATTCAGAATGACCGGTATTATTGTCTCCTGGTGCCCTTGACATTGCCTATCCTTTACGTCGCGGTTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGA

Protein sequence

MSSIGSLVPREVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLVPLTLPILYVAVYFHWLSMKLFKHA

Homology

[Close]

BLAST of CmUC02G048560 vs. NCBI nr
Match: ADN33919.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-30
Identity = 75/88 (85.23%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYY 60
          MSSI SL+PR E V R QGF FVV+SF  LL+FLYAA+ISKLLPPSNNAFLSAIQND YY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of CmUC02G048560 vs. NCBI nr
Match: KAG6605922.1 (hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035870.1 hypothetical protein SDJN02_02669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 7.2e-29
Identity = 73/88 (82.95%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1  MSSIGSLVPREVVD-RWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYY 60
          MSSI S V RE    RWQGF+F+VVSF FLLLFLYAAIISKLL PS+NAFLSAIQ D YY
Sbjct: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          CLLVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 67 CLLVPLTLPILYAAVYFHWLSMKLFKHA 94

[Close]

BLAST of CmUC02G048560 vs. NCBI nr
Match: EYU17719.1 (hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata])

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-19
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 7  LVPREVVDR----WQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLL 66
          L  RE VD     + G+ F++   F  + FLYAA++SKLLPPS+N+ + AIQND YYC L
Sbjct: 2  LALREFVDSNGRIFWGWFFLIFGSFSFVFFLYAAVVSKLLPPSDNSVIQAIQNDWYYCFL 61

Query: 67 VPLTLPILYVAVYFHWLSMKLFKHA 88
          VPLTLPIL+VAVYFHWLSMKLFKHA
Sbjct: 62 VPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of CmUC02G048560 vs. NCBI nr
Match: XP_040987410.1 (uncharacterized protein LOC121235195 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 105.1 bits (261), Expect = 3.0e-19
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 2   SSIGSLVPREVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCL 61
           SS  S +     + + G+LFV + F F + FL+AA++SKLL  SNNA +SAIQND +YC 
Sbjct: 15  SSTSSQLTSSKDEFFWGYLFVAIGFVFFVNFLFAAVVSKLLSSSNNALISAIQNDWFYCF 74

Query: 62  LVPLTLPILYVAVYFHWLSMKLFKHA 88
           LVPLTLP+L VAVYFHWLSMKLFKHA
Sbjct: 75  LVPLTLPVLVVAVYFHWLSMKLFKHA 100

[Close]

BLAST of CmUC02G048560 vs. NCBI nr
Match: KDO61195.1 (hypothetical protein CISIN_1g040265mg [Citrus sinensis])

HSP 1 Score: 105.1 bits (261), Expect = 3.0e-19
Identity = 54/70 (77.14%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 18 GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLVPLTLPILYVAVYFH 77
          G+ F+V+   F L FL+AAIISKLLP SNN  LSAIQNDRYYC LVPLTLPI+ VAVYFH
Sbjct: 16 GWFFIVIGSAFFLGFLFAAIISKLLPLSNNPLLSAIQNDRYYCFLVPLTLPIIVVAVYFH 75

Query: 78 WLSMKLFKHA 88
          WLSMKLFKHA
Sbjct: 76 WLSMKLFKHA 85

[Close]

BLAST of CmUC02G048560 vs. ExPASy TrEMBL
Match: E5GBS7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 75/88 (85.23%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYY 60
          MSSI SL+PR E V R QGF FVV+SF  LL+FLYAA+ISKLLPPSNNAFLSAIQND YY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of CmUC02G048560 vs. ExPASy TrEMBL
Match: A0A0A0KIB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 76/88 (86.36%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYY 60
          MSSI SL+PR E V R QG LFVVVSF FLL+FLYAA ISKLLPPSNNAFLSAIQND +Y
Sbjct: 1  MSSIRSLIPREETVGRRQGVLFVVVSFLFLLIFLYAAFISKLLPPSNNAFLSAIQNDWHY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of CmUC02G048560 vs. ExPASy TrEMBL
Match: A0A022PQH2 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 7  LVPREVVDR----WQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLL 66
          L  RE VD     + G+ F++   F  + FLYAA++SKLLPPS+N+ + AIQND YYC L
Sbjct: 2  LALREFVDSNGRIFWGWFFLIFGSFSFVFFLYAAVVSKLLPPSDNSVIQAIQNDWYYCFL 61

Query: 67 VPLTLPILYVAVYFHWLSMKLFKHA 88
          VPLTLPIL+VAVYFHWLSMKLFKHA
Sbjct: 62 VPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of CmUC02G048560 vs. ExPASy TrEMBL
Match: A0A067F541 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040265mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 54/70 (77.14%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 18 GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLVPLTLPILYVAVYFH 77
          G+ F+V+   F L FL+AAIISKLLP SNN  LSAIQNDRYYC LVPLTLPI+ VAVYFH
Sbjct: 16 GWFFIVIGSAFFLGFLFAAIISKLLPLSNNPLLSAIQNDRYYCFLVPLTLPIIVVAVYFH 75

Query: 78 WLSMKLFKHA 88
          WLSMKLFKHA
Sbjct: 76 WLSMKLFKHA 85

[Close]

BLAST of CmUC02G048560 vs. ExPASy TrEMBL
Match: F6GWB2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00160 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.3e-19
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 18 GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLVPLTLPILYVAVYFH 77
          G++F++    F L FLYAA+ISKLLPPS N  +SAIQ DRYYC LVPLT+PIL VAVYFH
Sbjct: 19 GWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVPLTIPILIVAVYFH 78

Query: 78 WLSMKLFKHA 88
          WLSMKLFKHA
Sbjct: 79 WLSMKLFKHA 88

The following BLAST results are available for this feature:

BLAST of CmUC02G048560 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33919.1	2.2e-30	85.23	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAG6605922.1	7.2e-29	82.95	hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
EYU17719.1	2.3e-19	63.53	hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]	[more]
XP_040987410.1	3.0e-19	61.63	uncharacterized protein LOC121235195 [Juglans microcarpa x Juglans regia]	[more]
KDO61195.1	3.0e-19	77.14	hypothetical protein CISIN_1g040265mg [Citrus sinensis]	[more]

BLAST of CmUC02G048560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G048560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBS7	1.1e-30	85.23	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KIB0	1.1e-30	86.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1	[more]
A0A022PQH2	1.1e-19	63.53	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE...	[more]
A0A067F541	1.5e-19	77.14	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040265mg PE=4 SV=1	[more]
F6GWB2	3.3e-19	72.86	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00160 PE=4 SV=...	[more]

BLAST of CmUC02G048560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029164	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y	PFAM	PF15159	PIG-Y	coord: 18..86 e-value: 2.9E-18 score: 66.6
None	No IPR available	PANTHER	PTHR36485	OS01G0939000 PROTEIN	coord: 14..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G048560.1	CmUC02G048560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016166	phytoene dehydrogenase activity