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CmUC02G044740 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCGGATCGCGATAATTAATCCAACAACTCAGCGTGAAATGTGAAGACAGAATATTTCGCGGGGCGAACATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGGTTAGTTGCAAGTTCCTCGCTCTCTTTCTCTGTTCTTCTGTAATTCCTAACTCTCTCTTATGCCTCCATAGCCTTTAGATGCTGATTGTTTTCAAATTTCGTAAAATTATATCCTAACTTGTCCTTCTGAATCATTGCGATAGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGTTTGCTCTCACTTCGAAAGCAACTACTGAGTTAAAATTTCATGGAAACCCAACATTTTAGTTGTATATCTGAATATGTAAATTCGGCACTGTTGCTTATCAAAGCCTGCTTAATCTTATTACTGACTGAAGGGTTTAGCATTGTTATTGAAGTCCACAAATTCAGTCTTCCAAAAGTTGAGATGGTATTTGAGCTTGAAGGATTACATTGGGGTCCTTTCGATAATGGTTATGATACTGCCTCGTAACCACATTTGATTTTGGGTCTGATTTTTTTCCCCCTCTAACAGCGGTCTAAATGTTGCGCCATGGCTTCCATACTGGCCATATGTGTCCTATGAAGAGTTTGTGGGCTATTAGACATTGATTTGTTGTGTTTATAGTTGGTGTATTGTTAGAACTGTTTTGTTGTTTATATTCTTAGTTTTGATTAAAAGCTTTGTCTGTTAGATTCATAGCAGTGGTTGGTTATTGAAATTCAGTGGCCAAGCAGTATCTACAGTAACAAAACCACCCACTGTACTCATTGTATCAATAAAAATATGAATAGAACTATTGAAATGCACTAGTTTTTTATCTATGAGTGTCAGGACCAGCTTACGCACCTCGACTAATCTCACGGGTTCTCACTAGACAACCTGCCTGACCCTACAACATTTGGGTAGCAAGGAAACTCGTAAGATATTAAATCCTAGATAGGTGGCCACCATAGATTGAACCCATGACCTCTTAGCATTTATTATTACTATGTCTCCTTTTTTAGCACTAGGCCAATCCATGATGGTTTATAGAAAAGTGCTTCTTGAAACTTAGATTAGGGCTATCTTGAATCTGTGTTTTGTTTGTCTGCTTCTTAAGACAACTTAAGCTATTATTCATTTTAAAATTATGAGTTGGGTATAACAAAGGGCTTAGAGAGAATGAATTCAAGCCCAAGATTGCCAATGATCTAGGATTTAATACCTTATGAGTTCTGTTTGCAACCAAATGTAGTAAAGTCAGATGGTTGTTTCATGAGAATAGTTTAAGTGCACAGAACTTAGTCGGGGACACTAATGGATGTCAAAAAGAAAAAAGAAAAAGGTTTCTTTGGCCTTGCAAAATTGCAATCCATACAGCACAACTTTTTGTAAACAGTTTTGAACAAGGAGAAAAAGGCTATTTTAAAAAACAGCTCCCCAGCCATCATTTAGGTTTAGAATATTTTGTTTTGTGGTTTGATGGTTTGCTTTCAGTGACTTGTGCTTGTGCATACATTGTGTTGATAGAAGGAGGAAGCTATCGACTTGGAGAAAATACTTCTCAAACTCGTACATATTATGAACATACAGCTATCATTAAATACTTTTTAAGGGTTTGGCCTCGAGATATTCGGGAGGCGATTGAGGAGTTCCTTCTCCATTTGCCCTTCAAGGAGAAAGGCCGGTTTTTATGGAGAGCTAGGGTGTGCAATTTTGCAGGCTTGTTTTTTGTGGCCCTTGTATGTTTTCATTTTTTCTCAATGAAAGTAGTTGTTTCAATAAAAAGAAAATGAACACACTAAAGACTGCAAAAGTCGAAAATAAAACTGAAGTTCAACTTCCATCTTTGTGATCACTAAATAAACATTTCTATTCATGGAGTCTTTGATGTTGTCTCATCCTTCGAGGGTGAAATGAATATGTACAGTACACTGGGAAAGATATAATCCCTCTCTCTTTCCTTTTTTTTTTTTTTTTAAAGAAAAAGATGATAGAAATAATCTCTTAGAGGGCACGAGCGAAGAGTGGAGTTGTAAAGTATAGTTGTTAAGTTTGGAAAGTTGTTTTGTTGTCATGCCTATAACGTAAAAAGTTAACAAGTCATGAATGTTCTGCCCACAATGAGTTTAAGAATTTCTTGGGGCAAACAAGGAGTCTTCCCCAACTCCTACTCCTTGGGCCAAACATGCCCTTATTGTTTTGTTGGATACATATAAAGAATCTCAATTTTGTCACAAGATTTTAGACAGTTTTAATCGTGCTTATGCACATTGTTACTTGACCTTAGCCTTTGTAAAACAATGAGCAACTTTGCATTTTGGATCCACATGAACCTAAGTCTGTGTGATGAGTTATAATGCTTGAATCACTCAATAAGTTTCTTAGTTGAAGATTTGAACTAGAAGAAACCAGGTGAAAAGGATGGCATGATTATCATCATCTTGAAAAAGCAAGATAGGAAAGGTTGCCTGATCTTCTTTCCTTCATGGTTTCGTCATATTTTCCTGGGACTCTTTCAGAACTTTTTCATTCTGATATGTTATTCATACTAATTTGATGTGTTTATTTCGTAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCAAAACATTTATCAAGACTGA CTCGGATCGCGATAATTAATCCAACAACTCAGCGTGAAATGTGAAGACAGAATATTTCGCGGGGCGAACATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCAAAACATTTATCAAGACTGA ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCAAAACATTTATCAAGACTGA MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD Homology
BLAST of CmUC02G044740 vs. NCBI nr
Match: XP_038900751.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]) HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74 Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0
BLAST of CmUC02G044740 vs. NCBI nr
Match: XP_008463815.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 144/155 (92.90%), Postives = 147/155 (94.84%), Query Frame = 0
BLAST of CmUC02G044740 vs. NCBI nr
Match: XP_011657181.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus] >KAE8647013.1 hypothetical protein Csa_016997 [Cucumis sativus]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 144/155 (92.90%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of CmUC02G044740 vs. NCBI nr
Match: XP_022948128.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata] >KAG7023932.1 Biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68 Identity = 139/155 (89.68%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of CmUC02G044740 vs. NCBI nr
Match: XP_023534753.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268.9 bits (686), Expect = 2.8e-68 Identity = 139/155 (89.68%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy Swiss-Prot
Match: O22929 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana OX=3702 GN=BLOS1 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 3.0e-41 Identity = 81/132 (61.36%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy Swiss-Prot
Match: Q0VFD8 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis OX=8364 GN=bloc1s1 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 6.6e-20 Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy Swiss-Prot
Match: Q2NKW0 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9913 GN=BLOC1S1 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18 Identity = 41/116 (35.34%), Postives = 75/116 (64.66%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy Swiss-Prot
Match: Q54VX7 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium discoideum OX=44689 GN=bloc1s1 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18 Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy Swiss-Prot
Match: P78537 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX=9606 GN=BLOC1S1 PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18 Identity = 41/116 (35.34%), Postives = 75/116 (64.66%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy TrEMBL
Match: A0A1S3CKJ9 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501869 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72 Identity = 144/155 (92.90%), Postives = 147/155 (94.84%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy TrEMBL
Match: A0A6J1G8I4 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111451801 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68 Identity = 139/155 (89.68%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy TrEMBL
Match: A0A6J1L4G4 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111499798 PE=3 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67 Identity = 137/155 (88.39%), Postives = 140/155 (90.32%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy TrEMBL
Match: A0A6J1D9F5 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018127 PE=3 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65 Identity = 132/155 (85.16%), Postives = 140/155 (90.32%), Query Frame = 0
BLAST of CmUC02G044740 vs. ExPASy TrEMBL
Match: A0A5A7V238 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00400 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.6e-55 Identity = 117/129 (90.70%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of CmUC02G044740 vs. TAIR 10
Match: AT2G30330.1 (GCN5L1 family protein ) HSP 1 Score: 169.5 bits (428), Expect = 2.2e-42 Identity = 81/132 (61.36%), Postives = 108/132 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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