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CmUC02G044390 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAGCAGTAACAGAAATGGGTCTTATAGGGTAAAGCTCTCAATAAATTCAACTGTTTCTCATGGGGTTTGGCTCTGGCTGGAAATGGCTTATAACTAACTACTAAACTCTGCTTCTTTGCTCTGCTTCTTTTGATGTGGAGCCAAGACATGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACACGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATCTGATGAACAGAATCAGGTATGTTCTCGTAGTGTTTTCTCAAAGCTCAAGGCATAATAAAATGCAATGGTCTTCTGGAGCTTAAGCGCAATGTGCGGAAAAAAAAAGCACTATATATAAAAGTACTATATGAAGAAGATAAAACATAGTTGAAGTGGAAATATGAAAAAGAAGACCCTTAAACAAAAGAAATTTTGCATTTAGGCTTAATAAATTTGATTTTTTTAGTTAATAAAGAAGAAAAACCCCTGATTATTACTATTTTTAAAAAATTATAAAGAAGACCCTAGACCCGGGCCTTTGAGCCCATGTGTGCACCCGAGAGGGCTTTTTAAAACAAACTGTTCTAGTATGGAACTTGTCACTTCCTTTGCTTGATTATTGCTCTTTATAATTCTGGGGTTTCAATATTGGTTCCAAATTTGGGATGGATCAAGTATAGAAACAATAACATTATTTCCAACTCAAATGCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGTTGAGAGATTGA ATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAGCAGTAACAGAAATGGGTCTTATAGGACATGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACACGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATCTGATGAACAGAATCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGTTGAGAGATTGA ATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAGCAGTAACAGAAATGGGTCTTATAGGACATGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACACGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATCTGATGAACAGAATCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGTTGAGAGATTGA MSKSHGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHMLRD Homology
BLAST of CmUC02G044390 vs. NCBI nr
Match: XP_038901341.1 (E3 ubiquitin-protein ligase RGLG4 [Benincasa hispida]) HSP 1 Score: 181.4 bits (459), Expect = 3.8e-42 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of CmUC02G044390 vs. NCBI nr
Match: KAA0054718.1 (E3 ubiquitin-protein ligase RGLG2 [Cucumis melo var. makuwa] >TYJ95610.1 E3 ubiquitin-protein ligase RGLG2 [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40 Identity = 86/97 (88.66%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of CmUC02G044390 vs. NCBI nr
Match: XP_008456279.1 (PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Cucumis melo]) HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40 Identity = 86/97 (88.66%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of CmUC02G044390 vs. NCBI nr
Match: XP_004139915.2 (E3 ubiquitin-protein ligase RGLG4 [Cucumis sativus] >KGN46786.1 hypothetical protein Csa_021092 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 9.1e-36 Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CmUC02G044390 vs. NCBI nr
Match: KAG7035318.1 (E3 ubiquitin-protein ligase RGLG4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35 Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy Swiss-Prot
Match: Q9SAL0 (E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21 Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy Swiss-Prot
Match: Q8LB88 (E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-15 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy Swiss-Prot
Match: Q9LY87 (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14 Identity = 50/122 (40.98%), Postives = 61/122 (50.00%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy Swiss-Prot
Match: Q9SS90 (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.9e-12 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy Swiss-Prot
Match: Q8RX26 (E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.0e-11 Identity = 43/101 (42.57%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy TrEMBL
Match: A0A5A7UIE4 (E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00260 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40 Identity = 86/97 (88.66%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy TrEMBL
Match: A0A1S3C2F8 (E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo OX=3656 GN=LOC103496272 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40 Identity = 86/97 (88.66%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy TrEMBL
Match: A0A0A0KG96 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135420 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.4e-36 Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy TrEMBL
Match: A0A6J1G665 (E3 ubiquitin-protein ligase RGLG4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451227 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CmUC02G044390 vs. ExPASy TrEMBL
Match: A0A6J1KZS5 (E3 ubiquitin-protein ligase RGLG4 OS=Cucurbita maxima OX=3661 GN=LOC111499741 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 76/97 (78.35%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of CmUC02G044390 vs. TAIR 10
Match: AT1G79380.1 (Ca(2)-dependent phospholipid-binding protein (Copine) family ) HSP 1 Score: 103.6 bits (257), Expect = 9.4e-23 Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of CmUC02G044390 vs. TAIR 10
Match: AT1G67800.1 (Copine (Calcium-dependent phospholipid-binding protein) family ) HSP 1 Score: 82.0 bits (201), Expect = 2.9e-16 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of CmUC02G044390 vs. TAIR 10
Match: AT1G67800.2 (Copine (Calcium-dependent phospholipid-binding protein) family ) HSP 1 Score: 82.0 bits (201), Expect = 2.9e-16 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of CmUC02G044390 vs. TAIR 10
Match: AT1G67800.3 (Copine (Calcium-dependent phospholipid-binding protein) family ) HSP 1 Score: 82.0 bits (201), Expect = 2.9e-16 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of CmUC02G044390 vs. TAIR 10
Match: AT1G67800.4 (Copine (Calcium-dependent phospholipid-binding protein) family ) HSP 1 Score: 82.0 bits (201), Expect = 2.9e-16 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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