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CmUC02G044100 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAGATCGGTGGAAGAAAACAAGGCACATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTCGATGTGCTCAAGATTGTGTTTTCGCCCCGTATTTCCCCGCCGACGAACCTCATAAATTTGCTAGCGTCCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGTTGCAGGTTAGTAACTCAAATTATGTTTTCTTATATTACAAATTGTTTTTAATTTAACTAACTGGAGACTCTCAAATTTTCGTCTAATTAACTAATGGAACTATACATTGGTTGACGGTTAAATTAGTTAGCTCCTTTGTCAAAGACAGTAGAGAGGTAGGTTTTCAAATTGTCTATGATTGTATGAACAATGAACCAACAATCCTACTATCCTATTATCCTATTATTTCTACAAACCACACAAATTGACAAAAGAGCCCACATTTACGGACAAAAGAAGGAGAAAAAAAAAAAAATTAGGGTTTCATAAAATTATTCTATTTTTTTTAATTAAAAAAAAAATGACATGACACTCTCTTTCATTGGTGTTCCATCTTTTTCTTCAACTTTTTTCACTTTGATTATAAGCCACGACAAGATTAAACGTCCCTATCTCTCTCTTTCACACATTAATTAGTAATTTAGTACACTAATTACTAGTTACTATGGCATTAACTTTTTCAAGGCAAAGTAAAATATCTTGTTGAAAGAAAAAAATAAAAAATAAAAAATACAGTTTCCAACATTTTCAAAACTCACGAGTTCACAATTTAAACACAAGTACAACTATAGGAAACTAATTATCATACGTCCTACCAAGGAAAAAAAAAAAAAAACCCACGAGTTAAATTAGGATTAAACAACTAATATACATAAATTCAACTTCTAACAGGAAACACTGAATAAAGTTGAATAATTAAATAAGAGGGTAATGTAAATGTTAGGTATCTTTTATTTATTTCCGTTATAGTGGTTGATTACAGTTGAGGAGCCCACCCTATAGACAAAAATTAAATAAATAAAAAAAAAGTGTCTCAAATATTTCTACTTTTTGAAAAAGCAAACCCCAAAATTGGTTGGAAGACCAATTCAGGAGATTCCTTAGCGTATGAAAGAGTAAAGGGCATGGTTTAATTTGTACTAAATAATTAATCAAACCATGCTTTAATTAACCATAGCCTTTGGTTAATTAACACTTAACTAAAGCAAAGTATAATTTATGTTTTAATTAATTATTTAATCCCCTCAACTTTAACCCATTAGCCTTCTAACTTTTCGAGAAATTACAAGATCAACCTGAACTTTTTTTCCCCTAGCTCCAAAAGAAAGGCAAGATTCTAAATGTTTTTATTTATTTCACTATATTATAAATCAATATTATTTGTGTCATTCTAACGTCACCATGACATCTAAAATCCTTTCTTCTTATAAAAGCAATGTAAATAGTTGGTATGAGTACGTTTCTTTTTAATATTGTAATAACTAATAAAATATATTTGGTTGCATTTTGGTTTGTAGCTATTTTTGTGCGACTCACTCAATTTCAATCTCAGTTTACCATGTGGTAAACTTATTTCATTTTTATATAATTAGTAAAAATTAGAAAATTCTCAATATACTCCTAAAGATGGTTTCTCTTTGGGTTTACCATTCTTTAGTGGAATTTTTTTTCCTAAATACTCATTTGGATTTTATGGGCTATGATATATCCATATTAGATCATAAAGTTTTATTTCAAAACTAATTGACGAGAGAGAGTGAAATAACCATATTTCTTATATAGATTGTGACGTTTTTCCATGGTTAACAGGAGCTACCAGAGCAACAACGAAGCGATGCAGTTAGTTCAATGGTGTACGAGGCAAACGCGAGGGTGCGAGATCCGGTGTACGGTTGCGTTGGAGCAATATCGTCGCTACAACAACAAATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGAGGATGCGCCAATTCCCATCTACCTCCTGCAACCCGACTGCGGGCCACTCGCCGGAAACCACCTCACCCTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCGTGCTAG ATGAAGGAGATCGGTGGAAGAAAACAAGGCACATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTCGATGTGCTCAAGATTGTGTTTTCGCCCCGTATTTCCCCGCCGACGAACCTCATAAATTTGCTAGCGTCCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGTTGCAGGAGCTACCAGAGCAACAACGAAGCGATGCAGTTAGTTCAATGGTGTACGAGGCAAACGCGAGGGTGCGAGATCCGGTGTACGGTTGCGTTGGAGCAATATCGTCGCTACAACAACAAATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGAGGATGCGCCAATTCCCATCTACCTCCTGCAACCCGACTGCGGGCCACTCGCCGGAAACCACCTCACCCTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCGTGCTAG ATGAAGGAGATCGGTGGAAGAAAACAAGGCACATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTCGATGTGCTCAAGATTGTGTTTTCGCCCCGTATTTCCCCGCCGACGAACCTCATAAATTTGCTAGCGTCCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGTTGCAGGAGCTACCAGAGCAACAACGAAGCGATGCAGTTAGTTCAATGGTGTACGAGGCAAACGCGAGGGTGCGAGATCCGGTGTACGGTTGCGTTGGAGCAATATCGTCGCTACAACAACAAATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGAGGATGCGCCAATTCCCATCTACCTCCTGCAACCCGACTGCGGGCCACTCGCCGGAAACCACCTCACCCTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCGTGCTAG MKEIGGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSTSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC Homology
BLAST of CmUC02G044100 vs. NCBI nr
Match: XP_038902133.1 (LOB domain-containing protein 4-like [Benincasa hispida]) HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89 Identity = 167/173 (96.53%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of CmUC02G044100 vs. NCBI nr
Match: XP_004150042.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical protein Csa_020952 [Cucumis sativus]) HSP 1 Score: 335.1 bits (858), Expect = 3.6e-88 Identity = 165/173 (95.38%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of CmUC02G044100 vs. NCBI nr
Match: KAA0054642.1 (LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of CmUC02G044100 vs. NCBI nr
Match: XP_022149611.1 (LOB domain-containing protein 4 [Momordica charantia]) HSP 1 Score: 300.8 bits (769), Expect = 7.4e-78 Identity = 154/173 (89.02%), Postives = 160/173 (92.49%), Query Frame = 0
BLAST of CmUC02G044100 vs. NCBI nr
Match: XP_023533072.1 (LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 296.2 bits (757), Expect = 1.8e-76 Identity = 153/173 (88.44%), Postives = 159/173 (91.91%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-59 Identity = 124/173 (71.68%), Postives = 140/173 (80.92%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.9e-44 Identity = 98/170 (57.65%), Postives = 119/170 (70.00%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 178.7 bits (452), Expect = 5.6e-44 Identity = 84/116 (72.41%), Postives = 101/116 (87.07%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 163.7 bits (413), Expect = 1.9e-39 Identity = 75/120 (62.50%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.1e-37 Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy TrEMBL
Match: A0A0A0KBA8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88 Identity = 165/173 (95.38%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy TrEMBL
Match: A0A5D3CBA3 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00510 PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 8.0e-86 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy TrEMBL
Match: A0A6J1D8X3 (LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.6e-78 Identity = 154/173 (89.02%), Postives = 160/173 (92.49%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy TrEMBL
Match: A0A6J1I1K8 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 8.9e-77 Identity = 153/173 (88.44%), Postives = 159/173 (91.91%), Query Frame = 0
BLAST of CmUC02G044100 vs. ExPASy TrEMBL
Match: A0A6J1G6E3 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451283 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 8.9e-77 Identity = 153/173 (88.44%), Postives = 159/173 (91.91%), Query Frame = 0
BLAST of CmUC02G044100 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 229.9 bits (585), Expect = 1.5e-60 Identity = 124/173 (71.68%), Postives = 140/173 (80.92%), Query Frame = 0
BLAST of CmUC02G044100 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 ) HSP 1 Score: 180.3 bits (456), Expect = 1.4e-45 Identity = 98/170 (57.65%), Postives = 119/170 (70.00%), Query Frame = 0
BLAST of CmUC02G044100 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 178.7 bits (452), Expect = 4.0e-45 Identity = 84/116 (72.41%), Postives = 101/116 (87.07%), Query Frame = 0
BLAST of CmUC02G044100 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 163.7 bits (413), Expect = 1.3e-40 Identity = 75/120 (62.50%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of CmUC02G044100 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 ) HSP 1 Score: 155.6 bits (392), Expect = 3.6e-38 Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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