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CmUC02G043940 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGGAGGTTCATTTGTAGCACTCTAATTCTATTCCTATTCATTCACTGTTTCAGCCCAGGTGAGAACTAAAGGCTTCTCTTCTCTTATACCTTCTTCATATCTTCTAATACGGGTATCTTCTTGTTTCTTCTGTTTCAAATCAAACAAGAAGTTCTTTTCATGTTTTCTTTAATCCATGAACTAATCCAATAAAACCCAGATGTTTGTTTGTTTGTTACTGTGGGAGTATTTGTTTTCGTTCTAAATAAAGCTATCAAAGTAGTTGTTATTATTCTGTCTTATTCTTGGGTAACTTCTTTTATGGTTTTACATGTCGTGGAGTTCGGAATTTTGAATGCTTTTGCATTCTTCTTTATCGAAATCAGAATCTTTCACTTTTGACTAATTGTTCAATTTCTTCAACATTTCAATGATGCGTAGCCAGAAAGCAAGTATATCACACACATTACAAGAAAAACAAAACAAAGAATTTCAATTCATCCACTAAGAAAACTAAAATCAGTTTGTTGTTTTTGTATGTACCTTGTCTTTTCCCCGAATTTGAAATCAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAGCAGCATCCCGAAAATCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGACAGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCGAGCTTTACACCGGCAACCACCGCGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGCGGTGCCGATTGCTCGTCGATTCAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGGCACTGCCGTGATCACCAGCACCAATCCCAGTAAGTTTCTCTTCTTGCTTTATCTAATTAGGGTTTAG ATGGATGGGAGGTTCATTTGTAGCACTCTAATTCTATTCCTATTCATTCACTGTTTCAGCCCAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAGCAGCATCCCGAAAATCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGACAGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCGAGCTTTACACCGGCAACCACCGCGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGCGGTGCCGATTGCTCGTCGATTCAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGGCACTGCCGTGATCACCAGCACCAATCCCAGTAAGTTTCTCTTCTTGCTTTATCTAATTAGGGTTTAG ATGGATGGGAGGTTCATTTGTAGCACTCTAATTCTATTCCTATTCATTCACTGTTTCAGCCCAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAGCAGCATCCCGAAAATCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGACAGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCGAGCTTTACACCGGCAACCACCGCGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGCGGTGCCGATTGCTCGTCGATTCAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGGCACTGCCGTGATCACCAGCACCAATCCCAGTAAGTTTCTCTTCTTGCTTTATCTAATTAGGGTTTAG MDGRFICSTLILFLFIHCFSPGSSRADPSQKQGQQFRAASRKSSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFLFLLYLIRV Homology
BLAST of CmUC02G043940 vs. NCBI nr
Match: KAA0054595.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo var. makuwa] >TYK27559.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo var. makuwa]) HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86 Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of CmUC02G043940 vs. NCBI nr
Match: XP_008456350.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo] >XP_016901925.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo]) HSP 1 Score: 324.3 bits (830), Expect = 6.8e-85 Identity = 166/176 (94.32%), Postives = 169/176 (96.02%), Query Frame = 0
BLAST of CmUC02G043940 vs. NCBI nr
Match: XP_011656991.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X1 [Cucumis sativus] >KAE8646882.1 hypothetical protein Csa_021032 [Cucumis sativus]) HSP 1 Score: 320.5 bits (820), Expect = 9.8e-84 Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of CmUC02G043940 vs. NCBI nr
Match: XP_011656992.1 (major pollen allergen Ole e 10 isoform X2 [Cucumis sativus]) HSP 1 Score: 320.5 bits (820), Expect = 9.8e-84 Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of CmUC02G043940 vs. NCBI nr
Match: XP_038900832.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82 Identity = 163/177 (92.09%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy Swiss-Prot
Match: Q84V39 (Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17 Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3) HSP 1 Score: 85.9 bits (211), Expect = 5.3e-16 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.5e-15 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy Swiss-Prot
Match: P52409 (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.9e-15 Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy TrEMBL
Match: A0A5A7ULQ0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00320 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 6.0e-87 Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy TrEMBL
Match: A0A1S4E1R5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC103496317 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.3e-85 Identity = 166/176 (94.32%), Postives = 169/176 (96.02%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy TrEMBL
Match: A0A0A0KDA3 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139780 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.8e-84 Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy TrEMBL
Match: A0A6J1JFA6 (major pollen allergen Ole e 10-like OS=Cucurbita maxima OX=3661 GN=LOC111483888 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71 Identity = 148/178 (83.15%), Postives = 158/178 (88.76%), Query Frame = 0
BLAST of CmUC02G043940 vs. ExPASy TrEMBL
Match: A0A6J1FWZ7 (major pollen allergen Ole e 10-like OS=Cucurbita moschata OX=3662 GN=LOC111448235 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.5e-71 Identity = 148/178 (83.15%), Postives = 158/178 (88.76%), Query Frame = 0
BLAST of CmUC02G043940 vs. TAIR 10
Match: AT2G30933.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 137.9 bits (346), Expect = 8.4e-33 Identity = 73/130 (56.15%), Postives = 89/130 (68.46%), Query Frame = 0
BLAST of CmUC02G043940 vs. TAIR 10
Match: AT2G30933.2 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 137.9 bits (346), Expect = 8.4e-33 Identity = 73/130 (56.15%), Postives = 89/130 (68.46%), Query Frame = 0
BLAST of CmUC02G043940 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 119.4 bits (298), Expect = 3.1e-27 Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CmUC02G043940 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25 Identity = 71/151 (47.02%), Postives = 90/151 (59.60%), Query Frame = 0
BLAST of CmUC02G043940 vs. TAIR 10
Match: AT5G55180.2 (O-Glycosyl hydrolases family 17 protein ) HSP 1 Score: 95.1 bits (235), Expect = 6.2e-20 Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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