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CmUC02G043740 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTATTACAGCTTAATCCCATTATCTAGAAGAATGTTGCCAACTATAAAGGTTAGTTTTGTGTGCATCTGTATTCAGTAGTACTTAAAAGCAACAAAAGAAGGAAAACCAACTAATAATTCAATTCTTGTATATTTTTTAATGCAGCTGCATTGGAGATCCTGTTCTTGATAGGTTTCATTGAAGATGCACTGCTAGATGAAATCGGGAAGGCAGAAACATTCCTTGTACTGAAGCGCAATGATCCTGGCTTATTGTGGCTTGCGAAATCTACCATTGAAACATGCAATGCCCCGTAG ATGATCTTAATCCCATTATCTAGAAGAATGTTGCCAACTATAAAGGTTACTGCATTGGAGATCCTGTTCTTGATAGGTTTCATTGAAGATGCACTGCTAGATGAAATCGGGAAGGCAGAAACATTCCTTGTACTGAAGCGCAATGATCCTGGCTTATTGTGGCTTGCGAAATCTACCATTGAAACATGCAATGCCCCGTAG ATGATCTTAATCCCATTATCTAGAAGAATGTTGCCAACTATAAAGGTTACTGCATTGGAGATCCTGTTCTTGATAGGTTTCATTGAAGATGCACTGCTAGATGAAATCGGGAAGGCAGAAACATTCCTTGTACTGAAGCGCAATGATCCTGGCTTATTGTGGCTTGCGAAATCTACCATTGAAACATGCAATGCCCCGTAG MILIPLSRRMLPTIKVTALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNAP Homology
BLAST of CmUC02G043740 vs. NCBI nr
Match: XP_004143191.3 (uncharacterized protein LOC101220832 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. NCBI nr
Match: KAE8646929.1 (hypothetical protein Csa_021071 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. NCBI nr
Match: XP_008456391.1 (PREDICTED: uncharacterized protein LOC103496343 [Cucumis melo] >KAA0054508.1 putative Ubiquitin and WLM domain-containing protein [Cucumis melo var. makuwa] >TYJ98287.1 putative Ubiquitin and WLM domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. NCBI nr
Match: XP_038901675.1 (uncharacterized protein LOC120088443 [Benincasa hispida]) HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. NCBI nr
Match: XP_022149685.1 (uncharacterized protein LOC111018052 [Momordica charantia]) HSP 1 Score: 94.0 bits (232), Expect = 5.3e-16 Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of CmUC02G043740 vs. ExPASy TrEMBL
Match: A0A5A7UHQ6 (Putative Ubiquitin and WLM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G00330 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.9e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. ExPASy TrEMBL
Match: A0A0A0KF59 (WLM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G169280 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.9e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. ExPASy TrEMBL
Match: A0A1S3C3T6 (uncharacterized protein LOC103496343 OS=Cucumis melo OX=3656 GN=LOC103496343 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.9e-17 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of CmUC02G043740 vs. ExPASy TrEMBL
Match: A0A6J1D6E8 (uncharacterized protein LOC111018052 OS=Momordica charantia OX=3673 GN=LOC111018052 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.6e-16 Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of CmUC02G043740 vs. ExPASy TrEMBL
Match: A0A6J1JF11 (uncharacterized protein LOC111483826 OS=Cucurbita maxima OX=3661 GN=LOC111483826 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-15 Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CmUC02G043740 vs. TAIR 10
Match: AT5G35690.1 (CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 3.9e-09 Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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