![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmUC02G043200 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACTCGTGAAGTGAACCCACAAAATGTTACTACTAACAAAGTTGAAAGAAAGGTCATGGAGAAAAATCGCAGAAACAAGATGAAATCACTTTACTCAAAATTGAATTCTCTTCTCCCAACCCATCACTCAAATGTTTGTTTTTTCTTTCTTTTATTTTTTATTTTTTATTTTTTTCCTTTTTTTTTATTATGTTCTTAATTGTGTCTTCACTGAAATTTTGTAGGAGTTGCCACTGACAGTGTCAAATCAGATAGATGAAGCAACAAAGTACATTAAATCTCTAGAGATAAAACTGAAGAATGATGAGGAGAAGAAGGAGAGATTTTTGAGAAGATCAAAAATGTCGTCGTTGTCATTGTCATCGTCATTGTCGTATTCAACACCATCAATGAGCCAGAATAGGAATGCACCTAAATTGAAAATCAAAGACTTGGGCTCGACTGTGGAGGTTGTTTTAACAACTGGGTTGGACGATCGGTCAATATTTTATGAGATTATTGATATTTTTCACGAGGAGCGAGCCGAGATCATTAATATCAGTTATTCCACTCTCGAAAACACTGTCATATATTCGCTCCACACTGAGGTATATATTCGAGAAGATTTTTAGTATTAATGTGGTATGAACTTCATCTTATTGATATATAAAAAATACTTAAGAATTGTATGAATGAAGTATCAAATAGAAAGGTGTAAATGCTCTCTAAGTGCTTAACTTAATTTTCAAATATAACATTCTAACCATAATACGATGGTATGAATAACTTCCTTCCTTCATTGCTGGAAACAAAATTGTGACCTATCAAATGCATATCACATGTGATATGCAGGGTAAGGGGTAAGTGTTACCCTATAGAAGTCTATCACAATTTATCATATATATTGTTTTATATTTATAAAATTTATCTTTGTTTTCTCATATAAACAATTAAATTCTGAGTTAAATTTAAATTTAATTTTTAAAAACTATTTTTTTTAGTTTTCAAATTTTGGCTTGGTTTTTAATAATATTAGTGAAGAGTGAACAACAATACAAATAAACTCATAATTAAAAATAGTATTTGTAAACTAATTAAAATTTCTAAAACTAAGGTTATAACCAAACCAAACTTTAGTTATTTGTATCTTTTATTTTTTCAAATTATGGTGGTTTAATTTTCTCAGCATTTGTTACTATAATTTTTTTCTTACTGAGACATTCTAATTATTAATCATATATATATATATATTAAAAAGACAAAAACAAAAAGGAGTATGAAACGAATGTAACTAAAATGTTTTTTTTTTTTTTTTTGGGTTATTATGGGAGTAGATTGAAGACGTGGTGTACGAATTTGGAGGAACGAAACTGATAGAGAGGCTAAAAAAATTGGTTTACGAACCCAAAAATGATCCAGAAATGCAGGCCGCACCAGCTTCGAGCAGTGACGGCGGAAGCCATCTTCCGGCGAACTTTCCGACGACCACTTCCGACTACGATTTTTGGAGCCACTAG ATGGGAACTCGTGAAGTGAACCCACAAAATGTTACTACTAACAAAGTTGAAAGAAAGGTCATGGAGAAAAATCGCAGAAACAAGATGAAATCACTTTACTCAAAATTGAATTCTCTTCTCCCAACCCATCACTCAAATGAGTTGCCACTGACAGTGTCAAATCAGATAGATGAAGCAACAAAGTACATTAAATCTCTAGAGATAAAACTGAAGAATGATGAGGAGAAGAAGGAGAGATTTTTGAGAAGATCAAAAATGTCGTCGTTGTCATTGTCATCGTCATTGTCGTATTCAACACCATCAATGAGCCAGAATAGGAATGCACCTAAATTGAAAATCAAAGACTTGGGCTCGACTGTGGAGGTTGTTTTAACAACTGGGTTGGACGATCGGTCAATATTTTATGAGATTATTGATATTTTTCACGAGGAGCGAGCCGAGATCATTAATATCAGTTATTCCACTCTCGAAAACACTGTCATATATTCGCTCCACACTGAGATTGAAGACGTGGTGTACGAATTTGGAGGAACGAAACTGATAGAGAGGCTAAAAAAATTGGTTTACGAACCCAAAAATGATCCAGAAATGCAGGCCGCACCAGCTTCGAGCAGTGACGGCGGAAGCCATCTTCCGGCGAACTTTCCGACGACCACTTCCGACTACGATTTTTGGAGCCACTAG ATGGGAACTCGTGAAGTGAACCCACAAAATGTTACTACTAACAAAGTTGAAAGAAAGGTCATGGAGAAAAATCGCAGAAACAAGATGAAATCACTTTACTCAAAATTGAATTCTCTTCTCCCAACCCATCACTCAAATGAGTTGCCACTGACAGTGTCAAATCAGATAGATGAAGCAACAAAGTACATTAAATCTCTAGAGATAAAACTGAAGAATGATGAGGAGAAGAAGGAGAGATTTTTGAGAAGATCAAAAATGTCGTCGTTGTCATTGTCATCGTCATTGTCGTATTCAACACCATCAATGAGCCAGAATAGGAATGCACCTAAATTGAAAATCAAAGACTTGGGCTCGACTGTGGAGGTTGTTTTAACAACTGGGTTGGACGATCGGTCAATATTTTATGAGATTATTGATATTTTTCACGAGGAGCGAGCCGAGATCATTAATATCAGTTATTCCACTCTCGAAAACACTGTCATATATTCGCTCCACACTGAGATTGAAGACGTGGTGTACGAATTTGGAGGAACGAAACTGATAGAGAGGCTAAAAAAATTGGTTTACGAACCCAAAAATGATCCAGAAATGCAGGCCGCACCAGCTTCGAGCAGTGACGGCGGAAGCCATCTTCCGGCGAACTTTCCGACGACCACTTCCGACTACGATTTTTGGAGCCACTAG MGTREVNPQNVTTNKVERKVMEKNRRNKMKSLYSKLNSLLPTHHSNELPLTVSNQIDEATKYIKSLEIKLKNDEEKKERFLRRSKMSSLSLSSSLSYSTPSMSQNRNAPKLKIKDLGSTVEVVLTTGLDDRSIFYEIIDIFHEERAEIINISYSTLENTVIYSLHTEIEDVVYEFGGTKLIERLKKLVYEPKNDPEMQAAPASSSDGGSHLPANFPTTTSDYDFWSH Homology
BLAST of CmUC02G043200 vs. NCBI nr
Match: XP_038902351.1 (transcription factor bHLH162-like [Benincasa hispida]) HSP 1 Score: 311.2 bits (796), Expect = 7.2e-81 Identity = 171/224 (76.34%), Postives = 190/224 (84.82%), Query Frame = 0
BLAST of CmUC02G043200 vs. NCBI nr
Match: XP_038902350.1 (transcription factor bHLH162-like [Benincasa hispida]) HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72 Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of CmUC02G043200 vs. NCBI nr
Match: XP_023512282.1 (transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.1 bits (627), Expect = 2.9e-61 Identity = 133/196 (67.86%), Postives = 158/196 (80.61%), Query Frame = 0
BLAST of CmUC02G043200 vs. NCBI nr
Match: XP_022944108.1 (transcription factor bHLH162-like [Cucurbita moschata]) HSP 1 Score: 243.8 bits (621), Expect = 1.4e-60 Identity = 134/200 (67.00%), Postives = 160/200 (80.00%), Query Frame = 0
BLAST of CmUC02G043200 vs. NCBI nr
Match: XP_022986054.1 (transcription factor bHLH162-like [Cucurbita maxima]) HSP 1 Score: 234.6 bits (597), Expect = 8.6e-58 Identity = 131/197 (66.50%), Postives = 159/197 (80.71%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.2e-23 Identity = 71/179 (39.66%), Postives = 117/179 (65.36%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.5e-08 Identity = 53/187 (28.34%), Postives = 98/187 (52.41%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy Swiss-Prot
Match: Q9XIJ1 (Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05 Identity = 48/186 (25.81%), Postives = 92/186 (49.46%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04 Identity = 44/174 (25.29%), Postives = 87/174 (50.00%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy TrEMBL
Match: A0A6J1FXP8 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 6.9e-61 Identity = 134/200 (67.00%), Postives = 160/200 (80.00%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy TrEMBL
Match: A0A6J1JF05 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111483908 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 4.2e-58 Identity = 131/197 (66.50%), Postives = 159/197 (80.71%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy TrEMBL
Match: A0A5A7V416 (Transcription factor bHLH36-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003780 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 7.1e-58 Identity = 125/178 (70.22%), Postives = 152/178 (85.39%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy TrEMBL
Match: A0A5D3BZ69 (Transcription factor bHLH36-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002050 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57 Identity = 125/178 (70.22%), Postives = 151/178 (84.83%), Query Frame = 0
BLAST of CmUC02G043200 vs. ExPASy TrEMBL
Match: A0A1S4DX24 (transcription factor bHLH36-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990944 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57 Identity = 125/178 (70.22%), Postives = 151/178 (84.83%), Query Frame = 0
BLAST of CmUC02G043200 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 2.3e-24 Identity = 71/179 (39.66%), Postives = 117/179 (65.36%), Query Frame = 0
BLAST of CmUC02G043200 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 6.0e-09 Identity = 53/187 (28.34%), Postives = 98/187 (52.41%), Query Frame = 0
BLAST of CmUC02G043200 vs. TAIR 10
Match: AT1G10586.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06 Identity = 48/186 (25.81%), Postives = 92/186 (49.46%), Query Frame = 0
BLAST of CmUC02G043200 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05 Identity = 44/174 (25.29%), Postives = 87/174 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|