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CmUC02G043120 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATCGGGATTCATCGCCGCCTCCGTCGCCGCCGCATCCGCGGCCGCCGTCTCTGCCTCCCCTTCTTCATCTACTCTTATCTGCAACCCGAAAGTTCAATTCCCTCGCCAGGTAAGCCTTGAATCAACGATTCATCAATTTTCCTCTTCCAAAAATTCCTCCTTTAAGAATTTGAACTTTCAATTTCTCGTCTTTTTCGCTGCTTTTGAGATTCGGGAAATTTAATTATGCAGGAGGGTAAGGAAGGAGAGAACTCTTCGTCTTCAACCGACAAATTTGCTCCCAAATTTGATGGATTGAGATTTATTGAAACTCTTGTTACGGCTCACAGATAA ATGAAGAAATCGGGATTCATCGCCGCCTCCGTCGCCGCCGCATCCGCGGCCGCCGTCTCTGCCTCCCCTTCTTCATCTACTCTTATCTGCAACCCGAAAGTTCAATTCCCTCGCCAGGAGGGTAAGGAAGGAGAGAACTCTTCGTCTTCAACCGACAAATTTGCTCCCAAATTTGATGGATTGAGATTTATTGAAACTCTTGTTACGGCTCACAGATAA ATGAAGAAATCGGGATTCATCGCCGCCTCCGTCGCCGCCGCATCCGCGGCCGCCGTCTCTGCCTCCCCTTCTTCATCTACTCTTATCTGCAACCCGAAAGTTCAATTCCCTCGCCAGGAGGGTAAGGAAGGAGAGAACTCTTCGTCTTCAACCGACAAATTTGCTCCCAAATTTGATGGATTGAGATTTATTGAAACTCTTGTTACGGCTCACAGATAA MKKSGFIAASVAAASAAAVSASPSSSTLICNPKVQFPRQEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR Homology
BLAST of CmUC02G043120 vs. NCBI nr
Match: XP_038902353.1 (uncharacterized protein LOC120088987 [Benincasa hispida]) HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25 Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of CmUC02G043120 vs. NCBI nr
Match: XP_004139940.2 (cell wall integrity and stress response component 1 [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 8.3e-23 Identity = 67/86 (77.91%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of CmUC02G043120 vs. NCBI nr
Match: XP_022140652.1 (uncharacterized protein LOC111011258 [Momordica charantia]) HSP 1 Score: 115.2 bits (287), Expect = 2.4e-22 Identity = 64/72 (88.89%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of CmUC02G043120 vs. NCBI nr
Match: KAG6604795.1 (hypothetical protein SDJN03_02112, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 113.6 bits (283), Expect = 7.0e-22 Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmUC02G043120 vs. NCBI nr
Match: XP_022970726.1 (uncharacterized protein LOC111469626 [Cucurbita maxima]) HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21 Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmUC02G043120 vs. ExPASy TrEMBL
Match: A0A6J1CHM8 (uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011258 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 64/72 (88.89%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of CmUC02G043120 vs. ExPASy TrEMBL
Match: A0A6J1I1D6 (uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.6e-22 Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmUC02G043120 vs. ExPASy TrEMBL
Match: E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.0e-15 Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of CmUC02G043120 vs. ExPASy TrEMBL
Match: A0A5N5FS08 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039583 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.8e-13 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of CmUC02G043120 vs. ExPASy TrEMBL
Match: A0A5N5H9S3 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_041112 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.8e-13 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of CmUC02G043120 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11 Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of CmUC02G043120 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 3.4e-06 Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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