CmUC02G042390 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G042390
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 30316073 .. 30316408 (+)
RNA-Seq ExpressionCmUC02G042390
SyntenyCmUC02G042390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCTCTTATGAAGATGGCTGCCTTTCTTTTCATTTTTCTTTGTATTTTCGACGCGTCAGCCTCAAGGGTCTTGACCGGAGAGCGGTGGCTTCCGGGGCCGAGTGTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCTAGTTCCAGTAGGAATCCATGTTCCTTTATTCCGGGGTTCAGCCGAGGCCGGTGTACGTTGAGCGAGGTGGAAGATGGTGATGCCGGTGTCCAAGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCCGCGGCTTCTATGGTTAACCAAACCCAGAAGCAAAATTCTTCTTTGAGCTCTTGA

mRNA sequence

ATGGCTTCTTCTCTTATGAAGATGGCTGCCTTTCTTTTCATTTTTCTTTGTATTTTCGACGCGTCAGCCTCAAGGGTCTTGACCGGAGAGCGGTGGCTTCCGGGGCCGAGTGTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCTAGTTCCAGTAGGAATCCATGTTCCTTTATTCCGGGGTTCAGCCGAGGCCGGTGTACGTTGAGCGAGGTGGAAGATGGTGATGCCGGTGTCCAAGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCCGCGGCTTCTATGGTTAACCAAACCCAGAAGCAAAATTCTTCTTTGAGCTCTTGA

Coding sequence (CDS)

ATGGCTTCTTCTCTTATGAAGATGGCTGCCTTTCTTTTCATTTTTCTTTGTATTTTCGACGCGTCAGCCTCAAGGGTCTTGACCGGAGAGCGGTGGCTTCCGGGGCCGAGTGTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCTAGTTCCAGTAGGAATCCATGTTCCTTTATTCCGGGGTTCAGCCGAGGCCGGTGTACGTTGAGCGAGGTGGAAGATGGTGATGCCGGTGTCCAAGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCCGCGGCTTCTATGGTTAACCAAACCCAGAAGCAAAATTCTTCTTTGAGCTCTTGA

Protein sequence

MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSLSS
Homology
BLAST of CmUC02G042390 vs. NCBI nr
Match: KGN60782.1 (hypothetical protein Csa_019261 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.8e-40
Identity = 91/111 (81.98%), Postives = 99/111 (89.19%), Query Frame = 0

Query: 1   MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPG 60
           MA SLMK  AFLFIFL I D SA+RVL GERWLPG  V  A+LRGPVPSSSRNPCSFIPG
Sbjct: 1   MAFSLMKTVAFLFIFLSIVDMSAARVLNGERWLPGSMVPFAMLRGPVPSSSRNPCSFIPG 60

Query: 61  FSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSLSS 112
           FSRGRCTLSEV++GDA V+GGSSAFPGLNADGFAAAS+VNQTQKQ+SS+SS
Sbjct: 61  FSRGRCTLSEVDEGDASVRGGSSAFPGLNADGFAAASVVNQTQKQDSSMSS 111

BLAST of CmUC02G042390 vs. NCBI nr
Match: KAA0063581.1 (hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa] >TYJ97908.1 hypothetical protein E5676_scaffold285G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36
Identity = 89/111 (80.18%), Postives = 92/111 (82.88%), Query Frame = 0

Query: 1   MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPG 60
           MA SL+K  AFLFIFL IFD S        RWLPG  V IAVLRGPVPSSSRNPCSFIPG
Sbjct: 1   MAFSLVKTVAFLFIFLSIFDVSVG------RWLPGSRVPIAVLRGPVPSSSRNPCSFIPG 60

Query: 61  FSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSLSS 112
           FSRGRCTLSEV+DG A V GGSSAFPGLNADGFAAASMVNQTQKQ+SSLSS
Sbjct: 61  FSRGRCTLSEVDDGAASVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS 105

BLAST of CmUC02G042390 vs. NCBI nr
Match: KAG6599331.1 (hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.9 bits (346), Expect = 5.4e-29
Identity = 68/88 (77.27%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 22  SASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGG 81
           SA+RV+TGERWLP P V +A+LRG VPSSSRNPCSFIPGFSRGRCTLSE +DG A V GG
Sbjct: 2   SAARVMTGERWLPAPRVPMAMLRGAVPSSSRNPCSFIPGFSRGRCTLSEADDGAAAVHGG 61

Query: 82  SSAFPGLNADGFAAASMVNQTQKQNSSL 110
           SSA  GLNADGFAAASM N+TQK++ SL
Sbjct: 62  SSALSGLNADGFAAASMANKTQKKDPSL 89

BLAST of CmUC02G042390 vs. NCBI nr
Match: KAG6586324.1 (hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-27
Identity = 77/113 (68.14%), Postives = 85/113 (75.22%), Query Frame = 0

Query: 1   MASSLMK--MAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFI 60
           M  S+MK   AAF+FI LCIF  SA+RVLTGERW P   VS  +LRG VP S RNPCSFI
Sbjct: 1   MPFSVMKTPAAAFVFILLCIFHVSAARVLTGERWRP---VSDRMLRGLVPPSGRNPCSFI 60

Query: 61  PGFSRGRCTLSEVED--GDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSL 110
           PG  RGRCTLSEVED  G  G  GGSSAFPG+N DGF+AA+MVN TQKQ+ SL
Sbjct: 61  PGLGRGRCTLSEVEDEAGGGGGGGGSSAFPGMNFDGFSAAAMVNGTQKQDPSL 110

BLAST of CmUC02G042390 vs. NCBI nr
Match: XP_021888699.1 (uncharacterized protein LOC110807772 [Carica papaya])

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-08
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 0

Query: 3   SSLMKMAAFLFIFLCIFD--ASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPG 62
           +++ K A  + +  C  +   +A R+L  E+WL    +  ++ RGPVP S  NPC+FIPG
Sbjct: 11  TTMAKWAIAVLLVSCFLEQKTAAVRLLDEEQWLAKNLIVQSLQRGPVPPSGGNPCTFIPG 70

Query: 63  FSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAA---SMVNQTQKQNSS 109
            +RGRCTLSE++      +  ++AFP +  D  A     S  N+TQKQ+SS
Sbjct: 71  RNRGRCTLSEMDVAGQFPRAPAAAFPDIVVDFGAVTAGNSGANETQKQDSS 121

BLAST of CmUC02G042390 vs. ExPASy TrEMBL
Match: A0A0A0LJ84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010180 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.6e-41
Identity = 91/111 (81.98%), Postives = 99/111 (89.19%), Query Frame = 0

Query: 1   MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPG 60
           MA SLMK  AFLFIFL I D SA+RVL GERWLPG  V  A+LRGPVPSSSRNPCSFIPG
Sbjct: 1   MAFSLMKTVAFLFIFLSIVDMSAARVLNGERWLPGSMVPFAMLRGPVPSSSRNPCSFIPG 60

Query: 61  FSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSLSS 112
           FSRGRCTLSEV++GDA V+GGSSAFPGLNADGFAAAS+VNQTQKQ+SS+SS
Sbjct: 61  FSRGRCTLSEVDEGDASVRGGSSAFPGLNADGFAAASVVNQTQKQDSSMSS 111

BLAST of CmUC02G042390 vs. ExPASy TrEMBL
Match: A0A5A7VCY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001240 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36
Identity = 89/111 (80.18%), Postives = 92/111 (82.88%), Query Frame = 0

Query: 1   MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPG 60
           MA SL+K  AFLFIFL IFD S        RWLPG  V IAVLRGPVPSSSRNPCSFIPG
Sbjct: 1   MAFSLVKTVAFLFIFLSIFDVSVG------RWLPGSRVPIAVLRGPVPSSSRNPCSFIPG 60

Query: 61  FSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSLSS 112
           FSRGRCTLSEV+DG A V GGSSAFPGLNADGFAAASMVNQTQKQ+SSLSS
Sbjct: 61  FSRGRCTLSEVDDGAASVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS 105

BLAST of CmUC02G042390 vs. ExPASy TrEMBL
Match: A0A5B6Z7Q1 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009663 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 0

Query: 12  LFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV 71
           +F  LC    SA R L  E+WL       ++ RGPVPSS  NPC++IPG   GRCTL+E 
Sbjct: 53  IFSVLCFRQLSAMRPLEEEQWLKKGLHIQSLPRGPVPSSGSNPCTYIPGRGTGRCTLAEN 112

Query: 72  EDGDAG-----VQGGSSAFPGLNADGFAAASMVNQTQKQNSS 109
           E   AG          +AFP      FAAAS  N T+K+++S
Sbjct: 113 EMNFAGGHDNVAPAPPAAFPDFMVK-FAAASKDNDTRKKDTS 153

BLAST of CmUC02G042390 vs. ExPASy TrEMBL
Match: A0A6A4KR04 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_20131 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.8e-07
Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 0

Query: 11  FLFIFLCIF---DASASRVLTGERWLPG-PSVSIAVL-RGPVPSSSRNPCSFIPGFSRGR 70
           F+F  L +F   +  A+R L GE WL    +++I  L RGPV  S  NPC++IPG  RGR
Sbjct: 9   FVFTVLLLFGCRENLATRPLEGEEWLNNLKTLAIQSLQRGPVTPSGSNPCTYIPGGKRGR 68

Query: 71  CTLSEVEDGDAGVQGGSS--AFPGLNADGFAAASMVNQTQKQNSS 109
           CTL+E E   +G  G ++  AFPG+    FA AS  N ++KQ+ S
Sbjct: 69  CTLAENESNYSGRVGHAAPPAFPGVMVK-FAPASTANDSRKQDGS 112

BLAST of CmUC02G042390 vs. ExPASy TrEMBL
Match: A0A5B6Z868 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009662 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-06
Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 0

Query: 22  SASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAG--VQ 81
           SA R L  E+ L       ++ RGPVPSS  NPC++IPG   GRCTL+E E   AG  V 
Sbjct: 28  SAMRPLEEEQRLKKGLPIQSLQRGPVPSSGSNPCTYIPGRGTGRCTLAENEMNFAGELVA 87

Query: 82  GGSSAFPGLNADGFAAASMVNQTQKQNS 108
               AFP    + FAAAS  N TQK+++
Sbjct: 88  HAPPAFPDFMVN-FAAASKANDTQKKDT 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN60782.11.8e-4081.98hypothetical protein Csa_019261 [Cucumis sativus][more]
KAA0063581.12.7e-3680.18hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa] >TYJ9790... [more]
KAG6599331.15.4e-2977.27hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6586324.12.2e-2768.14hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_021888699.15.2e-0838.74uncharacterized protein LOC110807772 [Carica papaya][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJ848.6e-4181.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010180 PE=4 SV=1[more]
A0A5A7VCY21.3e-3680.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5B6Z7Q11.6e-0743.14Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009663... [more]
A0A6A4KR042.8e-0743.81Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3... [more]
A0A5B6Z8683.1e-0646.59Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009662 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33592FAMILY NOT NAMEDcoord: 6..105
NoneNo IPR availablePANTHERPTHR33592:SF6SUBFAMILY NOT NAMEDcoord: 6..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G042390.1CmUC02G042390.1mRNA