CmUC02G041010 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G041010
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 28780362 .. 28780889 (+)
RNA-Seq ExpressionCmUC02G041010
SyntenyCmUC02G041010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTGGCTAGTGGCCAAAATACGGCGGTTGATTTCTGAATCAAATTCGAACTCCTCTCCACCGAAACACTCCGCTATGGAGCCCTTACAGGTGGATTGGTTAGGAATCCATGCAAGACTGTGGTGGATCCCGAGGCCGGCCTGGACGGCGGTTGAGGAGCAGCTGAAGACAACAAACACGGCGGCGCAGATCAGGAAGAAGGTCGGAGAATTGAATCCGGCCATTGCCATGCAAGAAAAAGCTCGTACTGTCTCAGTCTTCGTCTCTTTGTCTGTCTTCTACTCGGAATTGACGGTTTCCTCAGCTCCGGCAGTGGCTCCGGCGAATCGTCGGTGGGTTGTGCTTCTTCTTCGTTTTGGAGTTCCCTTAGCAAAAAAAAAAGCAAGCAGTGAAGAGGGCCAGTTGAAAGACTTATTTAGAACGTGGTCTGAAAGAATGCCCTTCTTTTACTACTTAATTACGAATATGCCATTTTGTGAGATTCTTTCTGAAAACGTCATGGACAAGGACAACCACTCCACCTAA

mRNA sequence

ATGTACTGGCTAGTGGCCAAAATACGGCGGTTGATTTCTGAATCAAATTCGAACTCCTCTCCACCGAAACACTCCGCTATGGAGCCCTTACAGGTGGATTGGTTAGGAATCCATGCAAGACTGTGGTGGATCCCGAGGCCGGCCTGGACGGCGGTTGAGGAGCAGCTGAAGACAACAAACACGGCGGCGCAGATCAGGAAGAAGGTCGGAGAATTGAATCCGGCCATTGCCATGCAAGAAAAAGCTCGTACTGTCTCAGTCTTCGTCTCTTTGTCTGTCTTCTACTCGGAATTGACGGTTTCCTCAGCTCCGGCAGTGGCTCCGGCGAATCGTCGGTGGGTTGTGCTTCTTCTTCGTTTTGGAGTTCCCTTAGCAAAAAAAAAAGCAAGCAGTGAAGAGGGCCAGTTGAAAGACTTATTTAGAACGTGGTCTGAAAGAATGCCCTTCTTTTACTACTTAATTACGAATATGCCATTTTGTGAGATTCTTTCTGAAAACGTCATGGACAAGGACAACCACTCCACCTAA

Coding sequence (CDS)

ATGTACTGGCTAGTGGCCAAAATACGGCGGTTGATTTCTGAATCAAATTCGAACTCCTCTCCACCGAAACACTCCGCTATGGAGCCCTTACAGGTGGATTGGTTAGGAATCCATGCAAGACTGTGGTGGATCCCGAGGCCGGCCTGGACGGCGGTTGAGGAGCAGCTGAAGACAACAAACACGGCGGCGCAGATCAGGAAGAAGGTCGGAGAATTGAATCCGGCCATTGCCATGCAAGAAAAAGCTCGTACTGTCTCAGTCTTCGTCTCTTTGTCTGTCTTCTACTCGGAATTGACGGTTTCCTCAGCTCCGGCAGTGGCTCCGGCGAATCGTCGGTGGGTTGTGCTTCTTCTTCGTTTTGGAGTTCCCTTAGCAAAAAAAAAAGCAAGCAGTGAAGAGGGCCAGTTGAAAGACTTATTTAGAACGTGGTCTGAAAGAATGCCCTTCTTTTACTACTTAATTACGAATATGCCATTTTGTGAGATTCTTTCTGAAAACGTCATGGACAAGGACAACCACTCCACCTAA

Protein sequence

MYWLVAKIRRLISESNSNSSPPKHSAMEPLQVDWLGIHARLWWIPRPAWTAVEEQLKTTNTAAQIRKKVGELNPAIAMQEKARTVSVFVSLSVFYSELTVSSAPAVAPANRRWVVLLLRFGVPLAKKKASSEEGQLKDLFRTWSERMPFFYYLITNMPFCEILSENVMDKDNHST
Homology
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BLAST of CmUC02G041010 vs. NCBI nr
Match: QHO45327.1 (uncharacterized protein DS421_6g178070 [Arachis hypogaea])

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-04
Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 0 

Query: 1  MYWLVAKIRRLISESNSNSSPP--KHSAMEPLQVD---WL------GIHARLWWIPRPAW 60
          MY +VAK+RRLISES SNSS P   HSAMEPLQ +   +L       I   L W P  A 
Sbjct: 1  MYLVVAKMRRLISESKSNSSSPASMHSAMEPLQEEPEPFLEATHPPTIPMGLKWSPASAV 60

Query: 61 TAVEEQLKTTNTAAQIRKKVGELNPAIAM 79
            V ++  TT   AQI +   +LN AI +
Sbjct: 61 VVVGDEAITTKMLAQITRTTHKLNLAIEL 89

The following BLAST results are available for this feature:
BLAST of CmUC02G041010 vs. NCBI nr
Match NameE-valueIdentityDescription
QHO45327.12.5e-0446.07uncharacterized protein DS421_6g178070 [Arachis hypogaea][more]
BLAST of CmUC02G041010 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC02G041010 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC02G041010 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G041010.1CmUC02G041010.1mRNA