CmUC02G039550 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G039550
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	DUF4283 domain-containing protein
Location	CmU531Chr02: 27295474 .. 27296838 (-)
RNA-Seq Expression	CmUC02G039550
Synteny	CmUC02G039550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCCAATTTTTTAAACCCTCGGAAGCCTTGATTCCTTTTGTTGATGTCTGGATTCGCCTGCTGGAGCTCAGTATTGAGTATTACGACAAGGAGGTTTTCCAGAACATTGCGAAAGCCATCGGCGTCTATCTCGTGAAGATCGATCCGGTAACTGAAAGACTAGAGAAATGTATGTTTGCTCGAATCTGCATTAGGATAACTTTATGCAATGGCAATCCCCTTATTTTGAGTATCCAATTTGGGGAAATTCAGCATAAAATTGAATATGAAGGCTTAGATTCTTTGTGCCATGATTGTGGATGTTTTTATGATCTAAAACACGATTGTTTAAATCAGAATAACCCTTTTGGTTCTTCTGGGTTTGATCCCCATCAACACAGACCTCATCCAAGTTCAGGTTCGAAGAAGCCATTGATTCATTCTCTACCTCAGAATCAGGATTGGGATCCAAATCCCATGAAAAAGACCCATTTCTTGAGTTGAAATTGAAGGACTGTCCAAGGGTTCAAATGGGTGAATGTAAGCCTAATGTTCTTGTGAAAGCTAAAGTCGTTGAAAATGAAAAGAAAACTTTGCCCAACTTTCCAAAAGAATCTTCAACAACAACCATGAAAGCTCTTGAGTCAAAGCACACCCATTTGATTCAGTTCGTACCTTGAGCTTCTTCTGTTGTTGTACATCAGTTCAGGGCTGCAAAAGCCAGTAGCCCCACAAAGTTTGCAGTCCATAACAATGAATCACAATCACCATATGCTGTGGAGGCTGGCCTTGAGTTCTATTCGACTGTGATGAAAACAATCTACAATAGAGAAAGAAAGAGATGATCAACACACCATCTGGAGGAGTTAATGTCGATGGTTGTCCAACTGTTTACAAGATTGATCTAAAGACCACGAGCCTCCAAATTGATTTGTCAGAAGTGCCAACAACCACAGGATCAAACCAAACCGAGTATGCTACCAACTTTGTGTTGCCTTGGAGAGGTGAAAACAAGAACGGAGTTGATTCGGAGGCTGTATGAATTGCCTGGATTGTGTTTTAAGAAAATGTTGTGCTGAAATTTTGGTGGGACGGACAATGCAAAGCTAATAGGGGCATCGAAAGATTTGATTCAACTATAGGAGGCATCCATTGTGCTGATATTTGGCTCCAATTAGCAGTGGTGATGCGGATCATATTGTAGAAAGTGGGATGGCTGCAGTGGTGGTGTTTGGATTTTGTTGTCCAGACAAGAAGTGCAAATTGAAGTCAGTTCCTACAGCCAACAGAAGGTTTCTGCATCAGTGCATTTTCATTGTAAACCCAATGAACCAGCTCCAACTCCAGGCCTTTTGGATGAAGATACCGAAACATCAGTAG

mRNA sequence

ATGGATTCCCAATTTTTTAAACCCTCGGAAGCCTTGATTCCTTTTGTTGATGTCTGGATTCGCCTGCTGGAGCTCAGTATTGAGTATTACGACAAGGAGGTTTTCCAGAACATTGCGAAAGCCATCGGCGTCTATCTCGTGAAGATCGATCCGACCTCATCCAAGTTCAGGTTCGAAGAAGCCATTGATTCATTCTCTACCTCAGAATCAGGATTGGGATCCAAATCCCATGAAAAAGACCCATTTCTTGAGTTGAAATTGAAGGACTGTCCAAGGGTTCAAATGGGTGAATGTAAGCCTAATGTTCTTGTGAAAGCTAAAGTCGTTGAAAATGAAAAGAAAACTTTGCCCAACTTTCCAAAAGAATCTTCAACAACAACCATGAAAGCTCTTGAGTCAAAGCACACCCATTTGATTCATGGTGATGCGGATCATATTGTAGAAAGTGGGATGGCTGCAGTGGTGGTGTTTGGATTTTGTTGTCCAGACAAGAAGTGCAAATTGAAGTCAGTTCCTACAGCCAACAGAAGGTTTCTGCATCAGTGCATTTTCATTGTAAACCCAATGAACCAGCTCCAACTCCAGGCCTTTTGGATGAAGATACCGAAACATCAGTAG

Coding sequence (CDS)

ATGGATTCCCAATTTTTTAAACCCTCGGAAGCCTTGATTCCTTTTGTTGATGTCTGGATTCGCCTGCTGGAGCTCAGTATTGAGTATTACGACAAGGAGGTTTTCCAGAACATTGCGAAAGCCATCGGCGTCTATCTCGTGAAGATCGATCCGACCTCATCCAAGTTCAGGTTCGAAGAAGCCATTGATTCATTCTCTACCTCAGAATCAGGATTGGGATCCAAATCCCATGAAAAAGACCCATTTCTTGAGTTGAAATTGAAGGACTGTCCAAGGGTTCAAATGGGTGAATGTAAGCCTAATGTTCTTGTGAAAGCTAAAGTCGTTGAAAATGAAAAGAAAACTTTGCCCAACTTTCCAAAAGAATCTTCAACAACAACCATGAAAGCTCTTGAGTCAAAGCACACCCATTTGATTCATGGTGATGCGGATCATATTGTAGAAAGTGGGATGGCTGCAGTGGTGGTGTTTGGATTTTGTTGTCCAGACAAGAAGTGCAAATTGAAGTCAGTTCCTACAGCCAACAGAAGGTTTCTGCATCAGTGCATTTTCATTGTAAACCCAATGAACCAGCTCCAACTCCAGGCCTTTTGGATGAAGATACCGAAACATCAGTAG

Protein sequence

MDSQFFKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTSSKFRFEEAIDSFSTSESGLGSKSHEKDPFLELKLKDCPRVQMGECKPNVLVKAKVVENEKKTLPNFPKESSTTTMKALESKHTHLIHGDADHIVESGMAAVVVFGFCCPDKKCKLKSVPTANRRFLHQCIFIVNPMNQLQLQAFWMKIPKHQ

Homology

[Close]

BLAST of CmUC02G039550 vs. NCBI nr
Match: KAA0034059.1 (hypothetical protein E6C27_scaffold65G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-22
Identity = 87/217 (40.09%), Postives = 100/217 (46.08%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDP-------------- 65
           FKPSEALI  VDVWIRL EL IEYYDKE+ + IA+AIGV LVKIDP              
Sbjct: 158 FKPSEALILHVDVWIRLPELGIEYYDKEILEKIAEAIGVCLVKIDPVTERRQKCMFARIC 217

Query: 66  -----------------TSSKFRFE----------------------------------- 125
                            T  K ++E                                   
Sbjct: 218 IRITLCNPLIYSIQFGQTLQKVQYEGLDSLCSVCGCIDNLKHVCLNPNNPSGSSGDDPHQ 277

Query: 126 ------EAID-----------------SFSTSESGLGSKSHEKDPFLELKLKDCPRVQMG 134
                 +AID                 S  +SES LGSKS EK+PFLELKLKDCP+++MG
Sbjct: 278 QNPCPLQAIDPSSSSGLALDSKKPLIHSLPSSESALGSKSQEKNPFLELKLKDCPKLKMG 337

[Close]

BLAST of CmUC02G039550 vs. NCBI nr
Match: KAA0034060.1 (hypothetical protein E6C27_scaffold65G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-14
Identity = 83/265 (31.32%), Postives = 99/265 (37.36%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS---SKFRFE--- 65
           FKPS+A I FVDVW+RL EL +E+Y++E+F+NIAKAIGV LVKIDP +    K+ F    
Sbjct: 210 FKPSKAFISFVDVWVRLPELGMEHYNREMFENIAKAIGVRLVKIDPVTERKQKYVFARIC 269

Query: 66  ------------------------EAIDS------------------------------- 125
                                   E +DS                               
Sbjct: 270 ITITLSNPLIHYIHIEGSRQNIVYEGLDSLCSVCGCVDDLKHICLNQNNPYDEYDPHQQH 329

Query: 126 ----------------------------------------------------------FS 134
                                                                     FS
Sbjct: 330 PCPLQAFDPSSSSGLDYLCSVCGFVYDLKHDRLNKNSPSGSSGHDPHQQNPFPCQPIDFS 389

[Close]

BLAST of CmUC02G039550 vs. NCBI nr
Match: XP_022988533.1 (uncharacterized protein LOC111485743 isoform X1 [Cucurbita maxima] >XP_022988542.1 uncharacterized protein LOC111485743 isoform X2 [Cucurbita maxima])

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-10
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS 54
           FKPSEA IPFVDVWIRL ELSIEYYDKEV + IAK IG  LVKIDP +
Sbjct: 123 FKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAKTIGGRLVKIDPVT 170

[Close]

BLAST of CmUC02G039550 vs. NCBI nr
Match: XP_022941632.1 (uncharacterized protein LOC111446932 isoform X2 [Cucurbita moschata])

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-10
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS 54
           FKPSEA IPFVDVWIRL ELSIEYYDKEV + IA+ IG  LVKIDP +
Sbjct: 122 FKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVT 169

[Close]

BLAST of CmUC02G039550 vs. NCBI nr
Match: KAG6600113.1 (hypothetical protein SDJN03_05346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-10
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS 54
           FKPSEA IPFVDVWIRL ELSIEYYDKEV + IA+ IG  LVKIDP +
Sbjct: 122 FKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVT 169

[Close]

BLAST of CmUC02G039550 vs. ExPASy TrEMBL
Match: A0A5A7SY10 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00450 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.7e-23
Identity = 87/217 (40.09%), Postives = 100/217 (46.08%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDP-------------- 65
           FKPSEALI  VDVWIRL EL IEYYDKE+ + IA+AIGV LVKIDP              
Sbjct: 158 FKPSEALILHVDVWIRLPELGIEYYDKEILEKIAEAIGVCLVKIDPVTERRQKCMFARIC 217

Query: 66  -----------------TSSKFRFE----------------------------------- 125
                            T  K ++E                                   
Sbjct: 218 IRITLCNPLIYSIQFGQTLQKVQYEGLDSLCSVCGCIDNLKHVCLNPNNPSGSSGDDPHQ 277

Query: 126 ------EAID-----------------SFSTSESGLGSKSHEKDPFLELKLKDCPRVQMG 134
                 +AID                 S  +SES LGSKS EK+PFLELKLKDCP+++MG
Sbjct: 278 QNPCPLQAIDPSSSSGLALDSKKPLIHSLPSSESALGSKSQEKNPFLELKLKDCPKLKMG 337

[Close]

BLAST of CmUC02G039550 vs. ExPASy TrEMBL
Match: A0A5A7SSW6 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00460 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14
Identity = 83/265 (31.32%), Postives = 99/265 (37.36%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS---SKFRFE--- 65
           FKPS+A I FVDVW+RL EL +E+Y++E+F+NIAKAIGV LVKIDP +    K+ F    
Sbjct: 210 FKPSKAFISFVDVWVRLPELGMEHYNREMFENIAKAIGVRLVKIDPVTERKQKYVFARIC 269

Query: 66  ------------------------EAIDS------------------------------- 125
                                   E +DS                               
Sbjct: 270 ITITLSNPLIHYIHIEGSRQNIVYEGLDSLCSVCGCVDDLKHICLNQNNPYDEYDPHQQH 329

Query: 126 ----------------------------------------------------------FS 134
                                                                     FS
Sbjct: 330 PCPLQAFDPSSSSGLDYLCSVCGFVYDLKHDRLNKNSPSGSSGHDPHQQNPFPCQPIDFS 389

[Close]

BLAST of CmUC02G039550 vs. ExPASy TrEMBL
Match: A0A6J1JDB0 (uncharacterized protein LOC111485743 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485743 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-10
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS 54
           FKPSEA IPFVDVWIRL ELSIEYYDKEV + IAK IG  LVKIDP +
Sbjct: 123 FKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAKTIGGRLVKIDPVT 170

[Close]

BLAST of CmUC02G039550 vs. ExPASy TrEMBL
Match: A0A6J1FN13 (uncharacterized protein LOC111446932 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446932 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS 54
           FKPSEA IPFVDVWIRL ELSIEYYDKEV + IA+ IG  LVKIDP +
Sbjct: 122 FKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVT 169

[Close]

BLAST of CmUC02G039550 vs. ExPASy TrEMBL
Match: A0A6J1FU80 (uncharacterized protein LOC111446932 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446932 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 6   FKPSEALIPFVDVWIRLLELSIEYYDKEVFQNIAKAIGVYLVKIDPTS 54
           FKPSEA IPFVDVWIRL ELSIEYYDKEV + IA+ IG  LVKIDP +
Sbjct: 122 FKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVT 169

The following BLAST results are available for this feature:

BLAST of CmUC02G039550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034059.1	1.8e-22	40.09	hypothetical protein E6C27_scaffold65G00450 [Cucumis melo var. makuwa]	[more]
KAA0034060.1	3.1e-14	31.32	hypothetical protein E6C27_scaffold65G00460 [Cucumis melo var. makuwa]	[more]
XP_022988533.1	2.1e-10	79.17	uncharacterized protein LOC111485743 isoform X1 [Cucurbita maxima] >XP_022988542...	[more]
XP_022941632.1	6.0e-10	77.08	uncharacterized protein LOC111446932 isoform X2 [Cucurbita moschata]	[more]
KAG6600113.1	6.0e-10	77.08	hypothetical protein SDJN03_05346, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC02G039550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G039550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY10	8.7e-23	40.09	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SSW6	1.5e-14	31.32	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1JDB0	1.0e-10	79.17	uncharacterized protein LOC111485743 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FN13	2.9e-10	77.08	uncharacterized protein LOC111446932 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FU80	2.9e-10	77.08	uncharacterized protein LOC111446932 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmUC02G039550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 4..48 e-value: 2.7E-7 score: 30.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G039550.1	CmUC02G039550.1	mRNA