CmUC02G038620 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G038620
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionCCHC-type domain-containing protein
LocationCmU531Chr02: 26091263 .. 26093450 (-)
RNA-Seq ExpressionCmUC02G038620
SyntenyCmUC02G038620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGAGAGAGAGAATGGCGACGGGGGAGGACATCGTGGACCCCGACCATGATTTCAGAAATCGTGGACCCGGTCCACGAGTCCAGTCAAACCTGCATGCTGACATGCAGCGGCAGGCAGGCAGCGTGGCAAGGCCATGCAGACGCGGCAGCGAAATCGTGGCCCCGGTCCACGATTTCACAACCTTATTTTTGGTATTTCTTCTTCCGACCCTATTTTTGGAATTATTTATTAAAAAAACATTATTTTAAAAAAATTCGTGAAGCGAGCAACCCAAAGAAGAGCTTGAGGAGAAAGTGATTTTTTTTTTTATTAATATTGTTATTATTAAAACCATTTATAAAAATATAGTTATTCCCAAATTTATTTAAAAAGTGTGATTTAAATTTAAATAATATTAATAAAAAATTATTTTTAATCGGTCTCTTTTTTTCTAAATTCATTTTCTTTATTCGACAAACAAACTTTAAAAAAAAAAAAATTAATACCTCGTCTTTGATAAGGATTTGCAAAACAACCATAGTTTTATAATAAATTTGGTAATGACTATATTTTTATAAATATTATTAAAAATAACCATATTAGTTAAAAATCCTATGAACCTAAACAAAATGTTAATACTATTATAAATATTAAAGAAAATTAGATGTCCATTATATAAATATGCTTAGTGGCAAAAGGCTATGTGTCTACTAAAGACACATCCTTTGTGGCCATGAAATGCCACTACCTACTTGCCAAATTGCCTATAAATAGAGCCTTTTTATGGATATTGTAATACACACATTGGAGAGAAAATAAGAAAAAGGATTGGTGTTGAGAAATTTCATAAAATTCCACTTTCTTTATTTTAGTTTATTTTAAGTTTAATTTAGTTGTTTTAATTACTTTTATATTATTTAATTATTTTATTATTTTAATATTATAATTCTCGGTTTTCGTGCTCCGTTTTTCCGTCATTTTGCTCCTCAATTTTACAACACGTTATCAGCACGAGCTCTTGTCGTTTTCCTGTTGAAGGTAGGTTCTGAAGGTATGCCATTTTCTCTTTATTATAATTAGTAAATTAAACGTTGTTTTGCATGTTTAATATATATATTAAATTGCTAATATAAATATAATTCTTTGTGATAGTGTTATCATGGCAAATCTTACAAAAATAGAATTTGCAGCCCTTGACATCAATGGAAATAATTATTTGTCATGGGTGCTTGATGCTGAAATACATCTCGATGCCATGAACCTGGGAGAAACAATTAAGGAAGAAAATGCAACATCCATTCAGGAAAAAGCAAAAGCTATGATCTTCCTTCGCCATCATCTTCACGAGGGATTGAAGATGGAATATTTAACAATAAAAGATCCATGTATCTTGTGGAAGAATTTAAAACAGAGATATGATCATCAGAAAACAGTCATTTTTCCTAAAGCCCGTTATGAATGGATGCATTTGAGGCTCCAAGATTTCAAATCAGTAAGTTATTACAACTCCGCGTTATTTAAAATAAGTTCAAAATTATTATTGTGCGGAGAGAAAATTACTGATGCGGATATGTTGGAGAAGACATTTTCTACATTCCATACCTCGAATATGGTCCTGCAGCAGCAATATTGAGAGAAAGGTTTTAAACAATATTCTGAATTAATTTCATGTCTTCTCGTGGCTGAACAAAATAATGCGCTATTAATGAAGAACCATGAATCTCGACCAACTGGAACAACACCATTCCCTGAAGTGAATGCTGTAAATTTTAATAATCGTGGTCGAGGTCGTGGTCGTGGTCGTGGTCGTGACCGTGGCAGAGGGAGAAATAGTTATTATTTTCGTGGTGGTCATTCTAATCATCCAAATTTCAAAAGAACCACCCGAAATGATGATCATAAAGGAAAAGCTCCACAAGGTAAAAATTCAAAAGATGATGAGCATAAATGCTTCCGATACGGTATGACTGGGCACTGGTCTCGTGTTTGCCGTACATCAAAACACCTAGTTGATCTCTATCAAGCTTCCCTGAAGGAAAAAGGGAAAAATGTGGAAGCAAATTTTGCACACCAGGATAATGATATATTTGACCAATTCAATATGACAAATTTGGATGTGGCGGACTTCTTTGAATCTCCTGAAGAGAAAGTCAGCACAAATGATGGCACAGCAAATGTTTTTTTTGATTTTGAGAATATGTAG

mRNA sequence

ATGGTGGGAGAGAGAGAATGGCGACGGGGGAGGACATCGTGGACCCCGACCATGATTTCAGAAATCGTGGACCCGGTCCACGAGTCCAGTCAAACCTGCATGCTGACATGCAGCGGCAGGCAGGCAGCGTGGCAAGGCCATGCAGACGCGGCAGCGAAATCGTGGCCCCGTGTTATCATGGCAAATCTTACAAAAATAGAATTTGCAGCCCTTGACATCAATGGAAATAATTATTTGTCATGGGTGCTTGATGCTGAAATACATCTCGATGCCATGAACCTGGGAGAAACAATTAAGGAAGAAAATGCAACATCCATTCAGGAAAAAGCAAAAGCTATGATCTTCCTTCGCCATCATCTTCACGAGGGATTGAAGATGGAATATTTAACAATAAAAGATCCATGTATCTTGTGGAAGAATTTAAAACAGAGATATGATCATCAGAAAACAGTCATTTTTCCTAAAGCCCGTTATGAATGGATGCATTTGAGGCTCCAAGATTTCAAATCAAACCATGAATCTCGACCAACTGGAACAACACCATTCCCTGAAGTGAATGCTGTAAATTTTAATAATCGTGGTCGAGGTCGTGGTCGTGGTCGTGGTCGTGACCGTGGCAGAGGGAGAAATAGTTATTATTTTCGTGGTGGTCATTCTAATCATCCAAATTTCAAAAGAACCACCCGAAATGATGATCATAAAGGAAAAGCTCCACAAGGTAAAAATTCAAAAGATGATGAGCATAAATGCTTCCGATACGGTATGACTGGGCACTGGTCTCGTGTTTGCCGTACATCAAAACACCTAGTTGATCTCTATCAAGCTTCCCTGAAGGAAAAAGGGAAAAATGTGGAAGCAAATTTTGCACACCAGGATAATGATATATTTGACCAATTCAATATGACAAATTTGGATGTGGCGGACTTCTTTGAATCTCCTGAAGAGAAAGTCAGCACAAATGATGGCACAGCAAATGTTTTTTTTGATTTTGAGAATATGTAG

Coding sequence (CDS)

ATGGTGGGAGAGAGAGAATGGCGACGGGGGAGGACATCGTGGACCCCGACCATGATTTCAGAAATCGTGGACCCGGTCCACGAGTCCAGTCAAACCTGCATGCTGACATGCAGCGGCAGGCAGGCAGCGTGGCAAGGCCATGCAGACGCGGCAGCGAAATCGTGGCCCCGTGTTATCATGGCAAATCTTACAAAAATAGAATTTGCAGCCCTTGACATCAATGGAAATAATTATTTGTCATGGGTGCTTGATGCTGAAATACATCTCGATGCCATGAACCTGGGAGAAACAATTAAGGAAGAAAATGCAACATCCATTCAGGAAAAAGCAAAAGCTATGATCTTCCTTCGCCATCATCTTCACGAGGGATTGAAGATGGAATATTTAACAATAAAAGATCCATGTATCTTGTGGAAGAATTTAAAACAGAGATATGATCATCAGAAAACAGTCATTTTTCCTAAAGCCCGTTATGAATGGATGCATTTGAGGCTCCAAGATTTCAAATCAAACCATGAATCTCGACCAACTGGAACAACACCATTCCCTGAAGTGAATGCTGTAAATTTTAATAATCGTGGTCGAGGTCGTGGTCGTGGTCGTGGTCGTGACCGTGGCAGAGGGAGAAATAGTTATTATTTTCGTGGTGGTCATTCTAATCATCCAAATTTCAAAAGAACCACCCGAAATGATGATCATAAAGGAAAAGCTCCACAAGGTAAAAATTCAAAAGATGATGAGCATAAATGCTTCCGATACGGTATGACTGGGCACTGGTCTCGTGTTTGCCGTACATCAAAACACCTAGTTGATCTCTATCAAGCTTCCCTGAAGGAAAAAGGGAAAAATGTGGAAGCAAATTTTGCACACCAGGATAATGATATATTTGACCAATTCAATATGACAAATTTGGATGTGGCGGACTTCTTTGAATCTCCTGAAGAGAAAGTCAGCACAAATGATGGCACAGCAAATGTTTTTTTTGATTTTGAGAATATGTAG

Protein sequence

MVGEREWRRGRTSWTPTMISEIVDPVHESSQTCMLTCSGRQAAWQGHADAAAKSWPRVIMANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHHLHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKSNHESRPTGTTPFPEVNAVNFNNRGRGRGRGRGRDRGRGRNSYYFRGGHSNHPNFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQASLKEKGKNVEANFAHQDNDIFDQFNMTNLDVADFFESPEEKVSTNDGTANVFFDFENM
Homology
BLAST of CmUC02G038620 vs. NCBI nr
Match: XP_017250847.1 (PREDICTED: uncharacterized protein LOC108221484 [Daucus carota subsp. sativus])

HSP 1 Score: 298.1 bits (762), Expect = 9.3e-77
Identity = 160/266 (60.15%), Postives = 186/266 (69.92%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+N TK+EF ALDI G NYLSW+LD EIHL A  LG TIKEEN  +   +AKAMIFLR H
Sbjct: 1   MSNFTKLEFEALDITGKNYLSWILDIEIHLAAQGLGNTIKEENQETESNRAKAMIFLRRH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKSNHESRPTGT 179
           LHE LK EYLT+K+P  LWK+LK RYDHQKTVI PKARY+WMHLRLQDFK+NHESRPTG+
Sbjct: 61  LHEALKSEYLTVKNPLELWKSLKDRYDHQKTVILPKARYDWMHLRLQDFKTNHESRPTGS 120

Query: 180 TPFPEVNAVNFN-NRGRGRGRGRGRDRGRGRNSYYFRG------GHS--NHPNFKRTTRN 239
            PFPE NA  +N  RGRG GRGR  +RGRGR   + RG      G+   N+P FK  T N
Sbjct: 121 RPFPEANAATYNYGRGRGGGRGRSGNRGRGRGRGFARGQGTRGRGYKIHNYPIFKNDTSN 180

Query: 240 DDHK--GKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQASLKEKGKNVEANF 299
            + K      + K     E  C+R G+ GHWSR CRT KHLV+LYQASLK+KGKNVE N 
Sbjct: 181 PNPKLENNINKDKGKGVVESTCYRCGVKGHWSRTCRTPKHLVELYQASLKDKGKNVETNL 240

Query: 300 AHQDNDIFDQ-FNMTNLDVADFFESP 314
              +N+  D    MT LD ADF+E+P
Sbjct: 241 VCGENEHADDLLKMTYLDAADFYENP 266

BLAST of CmUC02G038620 vs. NCBI nr
Match: WP_217833168.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-76
Identity = 162/242 (66.94%), Postives = 162/242 (66.94%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           MANL KIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKE NATSIQEKAKAMIFLRHH
Sbjct: 1   MANLIKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEGNATSIQEKAKAMIFLRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHE LKMEYLTIKD  ILWKNLKQRYDHQKTVI PKARYEWMHLRLQDFKS         
Sbjct: 61  LHERLKMEYLTIKDLSILWKNLKQRYDHQKTVILPKARYEWMHLRLQDFKSVSDYNSALF 120

Query: 180 ------------------------------------------------------------ 229
                                                                       
Sbjct: 121 KISSKLLLCGEKITDAYMLENTFSTFHASNMLMQQQYREKGFKQYSELISCLLVAEQNNE 180

BLAST of CmUC02G038620 vs. NCBI nr
Match: XP_038970581.1 (uncharacterized protein LOC120104123 [Phoenix dactylifera])

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-76
Identity = 167/347 (48.13%), Postives = 202/347 (58.21%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+NLTK+EF ALDI+G NYLSW LDAEIHLDAMNLGETIKE N  S+Q++AK MIFLRHH
Sbjct: 1   MSNLTKLEFVALDISGKNYLSWTLDAEIHLDAMNLGETIKEGNDASLQDRAKTMIFLRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHE LK EYLT+KDP +LW NLK+RYDHQK  I PKA YEW+HLRLQDFK+         
Sbjct: 61  LHESLKAEYLTVKDPYVLWTNLKERYDHQKYTILPKAHYEWIHLRLQDFKTVSEYNSAVF 120

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 121 RITSQLKLCGEKITEQDLLEKTYSTFHASNVLLQRQYRERGFKRYSELISCLLVAEQNNE 180

Query: 240 ----NHESRPTGTTPFPEVNAVNF----NNRGRGRGRGRGRDRGRGRNSYYFRGGHSNHP 299
               NH+SRPTG+ PFPEVNA +     ++RG   GRGRGR RGRGRN +++RGG+ +  
Sbjct: 181 LLMKNHQSRPTGSDPFPEVNAASSVHHRHDRGHSHGRGRGRSRGRGRNKHWYRGGY-HGI 240

Query: 300 NFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQASLKEKGK 330
           NFK++   ++         +SK+ E  C+R GM  HWSR CRT+KHLVDLYQASLK KG 
Sbjct: 241 NFKKSANKEE-----KPHNSSKNKESDCYRCGMKEHWSRTCRTAKHLVDLYQASLKGKGN 300

BLAST of CmUC02G038620 vs. NCBI nr
Match: XP_023919902.1 (uncharacterized protein LOC112031443 [Quercus suber])

HSP 1 Score: 294.7 bits (753), Expect = 1.0e-75
Identity = 159/289 (55.02%), Postives = 192/289 (66.44%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+NLTK+EFAALDI+G NYLSW LDAEIHL+A NLG+TIK  N  S+Q++AK+MIF+RHH
Sbjct: 1   MSNLTKLEFAALDISGKNYLSWTLDAEIHLEAKNLGDTIKVGNQASLQDRAKSMIFIRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHE LK EYLT+KDP +LW +LK+RY++QK+VI PKARY W++LRLQDFKS         
Sbjct: 61  LHEELKSEYLTVKDPLVLWNDLKERYENQKSVILPKARYNWLNLRLQDFKSVMAEQNNEL 120

Query: 180 ---NHESRPTGTTPFPEVNAVNFNNRGRGRGRGRGRDRGRGRNSYYFRGGHSNHPNFKRT 239
              NH+SRPTG+TPFPEVN  +F+       RGRGR RGRG N+ Y      N      T
Sbjct: 121 LLKNHQSRPTGSTPFPEVNRTSFDKHRGNYVRGRGRGRGRGWNNQYKEDRTHNSSKRNNT 180

Query: 240 T-RNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQASLKEKGKNVEA 299
                +  GK  Q K S   E+KC+R  M GHWSR CRT KHL DLYQAS+KEKGK +E 
Sbjct: 181 PYHQKNQNGKGLQNKPSNGHENKCYRCTMEGHWSRTCRTPKHLADLYQASIKEKGKGIET 240

Query: 300 NFAHQDNDIFDQFN---------MTNLDVADFFESPEEKVSTNDGTANV 327
           NF   D D+ D  N         MT+LDV+DFFE  + K     G  NV
Sbjct: 241 NFVDHD-DLEDPMNYLELPNGVDMTHLDVSDFFEDVDGKFDNLIGDGNV 288

BLAST of CmUC02G038620 vs. NCBI nr
Match: XP_024028194.1 (uncharacterized protein LOC112093620 [Morus notabilis])

HSP 1 Score: 294.7 bits (753), Expect = 1.0e-75
Identity = 175/357 (49.02%), Postives = 206/357 (57.70%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+NLTK+EF ALDI+GNNYL+W LDAEIHLDAMNLGETIKE N  S Q++AKAMIFLRHH
Sbjct: 1   MSNLTKLEFVALDISGNNYLAWTLDAEIHLDAMNLGETIKEGNEASSQDRAKAMIFLRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHEGLK+EYLT+KDP +LW NLK+RYDHQKTVI P ARY WMHLRLQDFKS         
Sbjct: 61  LHEGLKIEYLTVKDPYVLWSNLKERYDHQKTVILPSARYNWMHLRLQDFKSVSEYNSAMF 120

Query: 180 -----------------------------------------------------------N 239
                                                                      N
Sbjct: 121 KITSQLKLCGESVMEKTYSTFHASNMLLQQQYREQGFKKYFELISCMLVAEQNNELLMKN 180

Query: 240 HESRPTGTTPFPEVNAVNFNNRG------RGRGRGRGRDRGRGRNSYYFRG-GHSNHPNF 299
           H+S PTG+TPFPE NA + ++ G      RGRGRGRG  RGRGR   Y RG  + N  NF
Sbjct: 181 HQSHPTGSTPFPEANAASVDDFGRGQRHRRGRGRGRGCGRGRGRGRGYGRGYNNQNSSNF 240

Query: 300 KRTT--------RNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQAS 334
           K+TT        + +  + +  Q K SK++E  C + GM GHW R CRT+KH VDLYQAS
Sbjct: 241 KKTTSHHQKWENKEEKQEERGSQNKASKNNEDVCHKCGMRGHWRRTCRTAKHFVDLYQAS 300

BLAST of CmUC02G038620 vs. ExPASy TrEMBL
Match: A0A286QJ35 (Gag OS=Vitis vinifera OX=29760 GN=Gag PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 9.4e-75
Identity = 168/351 (47.86%), Postives = 197/351 (56.13%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+N+TK+EF ALDI+G NYLSW+LDAE+HLDAMNLG TIK+ N  S+Q++AKA+IFLRHH
Sbjct: 1   MSNITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHEGLK EYLT+KDP  LW NLK+RYDHQKTVI PKARY+WMHLRLQDFK+         
Sbjct: 61  LHEGLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALF 120

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 121 KISSQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNE 180

Query: 240 ----NHESRPTGTTPFPEVNAVNFNNRGRGRGRGRGRDRGRGRNSYYFRGGHSN------ 299
               NH+SRPTG+ PFPEVNA++   RGRGR RGRGR RGRGRN  Y  G +SN      
Sbjct: 181 LLMRNHQSRPTGSEPFPEVNAISSQTRGRGRERGRGRGRGRGRNPRY-HGSYSNNSQKMK 240

Query: 300 ---HPNFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQASL 327
              H      T      GK  Q K  K+ E+ C+R GM GHWSR CRT KHLVDLYQAS+
Sbjct: 241 ASLHHQKWNNTETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASI 300

BLAST of CmUC02G038620 vs. ExPASy TrEMBL
Match: A0A6P4NLU7 (uncharacterized protein LOC108481702 OS=Gossypium arboreum OX=29729 GN=LOC108481702 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.1e-74
Identity = 159/287 (55.40%), Postives = 187/287 (65.16%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+NLTK+EF ALDI GNNYLSWVLDAEIHLDA  LGETIKE N  S Q+KAKAMIFLRHH
Sbjct: 1   MSNLTKLEFVALDIIGNNYLSWVLDAEIHLDAKGLGETIKEGNKESTQDKAKAMIFLRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHEGLK +YLT+KDP ILW NLK+RYDHQKTVI PKARYEW++LRLQDFKS         
Sbjct: 61  LHEGLKTKYLTVKDPQILWANLKERYDHQKTVILPKARYEWLNLRLQDFKSVSDYNSPLA 120

Query: 180 ---------NHESRPTGTTPFPEVNA-------------VNFNNRGRGRGRGRGRDRGRG 239
                    NHE RPTG+ PFPE N               N + RGRG GRGRGR RGRG
Sbjct: 121 EQNNELLMKNHELRPTGSAPFPEANVSLHNGQELKETHYTNSSVRGRGCGRGRGRGRGRG 180

Query: 240 RNSYYFRGGHSNHPNFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKH 299
           R   Y  G      N     + D   G   + +  ++  + C+R G  GHWSRVCR  KH
Sbjct: 181 RGDRYGYGRDGRFKNSHSYQKWDRKNGNREEKEKGENVTNVCYRCGGKGHWSRVCRIQKH 240

Query: 300 LVDLYQASLKEKGKNVEANFAHQDND-IFDQFNMTNLDVADFFESPE 315
           LVDLY+ S+K+KG+ VE N  ++D +  FD  N T+L+VA+F  + E
Sbjct: 241 LVDLYEQSIKQKGEKVETNLVYKDGEGDFDDGNATHLEVANFLSTLE 287

BLAST of CmUC02G038620 vs. ExPASy TrEMBL
Match: A0A2N9I863 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47933 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 170/357 (47.62%), Postives = 202/357 (56.58%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+NLTK+EF ALDI+G NYLSW+LDAEIHL+AMNLG+TIK+ N  S Q +AKAMIF+RHH
Sbjct: 1   MSNLTKLEFVALDISGKNYLSWILDAEIHLEAMNLGDTIKDGNQASPQNRAKAMIFIRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHE LK EYLT+KDP ILW NLK+RY+HQKTVI PKARY+WMHLRLQDFKS         
Sbjct: 61  LHEELKTEYLTVKDPLILWNNLKERYEHQKTVILPKARYDWMHLRLQDFKSVSEYNSALF 120

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 121 KISSQLKLCGEKITDEDMLEKTYTTFHASNVLLQQQYRERKFTKYSELISCLLVAEQNNE 180

Query: 240 ----NHESRPTGTTPFPEVNAVNF-NNRG-RGRGRGRGRDRG-------RGRNSYYFRGG 299
               NH+SRPTG+TPFPEVN  +F NNRG  GRGRG GR RG       R   + Y R G
Sbjct: 181 LLLKNHQSRPTGSTPFPEVNGTSFDNNRGYNGRGRGHGRKRGGRTQNTPRKNTTPYHRKG 240

Query: 300 HSNHPNFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQASL 327
                N+  T ++ +  G+  Q K  K  E KC R GM GHW R CR  KHLVDLYQAS+
Sbjct: 241 -----NYNETKQHGN--GQGLQNKPPKTHEEKCLRCGMKGHWQRTCRMPKHLVDLYQASI 300

BLAST of CmUC02G038620 vs. ExPASy TrEMBL
Match: A0A2N9IT14 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55560 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 170/361 (47.09%), Postives = 203/361 (56.23%), Query Frame = 0

Query: 59  IMANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRH 118
           IM+NLTK+EF ALDI+G NYLSW+LDAEIHL+AMNLG+TIK+ N  S Q +AKAMIF+RH
Sbjct: 217 IMSNLTKLEFVALDISGKNYLSWILDAEIHLEAMNLGDTIKDGNQASPQNRAKAMIFIRH 276

Query: 119 HLHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS-------- 178
           HLHE LK EYLT+KDP ILW NLK+RY+HQKTVI PKARY+WMHLRLQDFKS        
Sbjct: 277 HLHEELKTEYLTVKDPLILWNNLKERYEHQKTVILPKARYDWMHLRLQDFKSVSEYNSAL 336

Query: 179 ------------------------------------------------------------ 238
                                                                       
Sbjct: 337 FKISSQLKLYGEKITDEDMLEKTYTTFHASNVLLQQQYRERKFTKYSELISCLLVAEQNN 396

Query: 239 -----NHESRPTGTTPFPEVNAVNF-NNRG-RGRGRGRGRDRG-------RGRNSYYFRG 298
                NH+SRPTG+TPFPEVN  ++ NNRG  GRGRG GR RG       R   + Y R 
Sbjct: 397 ELLLKNHQSRPTGSTPFPEVNGTSYDNNRGYNGRGRGHGRKRGGRTQNTPRKNTTPYHRK 456

Query: 299 GHSNHPNFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMTGHWSRVCRTSKHLVDLYQAS 330
           G     N+  T ++ +  G+  Q K  K  E KC R GM GHW   CR  KHLVDLYQAS
Sbjct: 457 G-----NYNETKQHGN--GQGLQNKPPKTHEEKCLRCGMKGHWQHTCRMPKHLVDLYQAS 516

BLAST of CmUC02G038620 vs. ExPASy TrEMBL
Match: A0A1U8N4C3 (uncharacterized protein LOC107944519 OS=Gossypium hirsutum OX=3635 GN=LOC107944519 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.0e-73
Identity = 161/299 (53.85%), Postives = 189/299 (63.21%), Query Frame = 0

Query: 60  MANLTKIEFAALDINGNNYLSWVLDAEIHLDAMNLGETIKEENATSIQEKAKAMIFLRHH 119
           M+NLTK+EF ALDI GNNYLSWVLDAEIHLDA  LGETIKE N  S Q+KAKAMIFLRHH
Sbjct: 1   MSNLTKLEFVALDITGNNYLSWVLDAEIHLDAKGLGETIKEGNEESTQDKAKAMIFLRHH 60

Query: 120 LHEGLKMEYLTIKDPCILWKNLKQRYDHQKTVIFPKARYEWMHLRLQDFKS--------- 179
           LHEGLK EYLT+KDP ILW NLK+RYDHQKTVI PKARYEW++LRLQDFKS         
Sbjct: 61  LHEGLKTEYLTVKDPQILWANLKERYDHQKTVILPKARYEWLNLRLQDFKSVSDYNSAMF 120

Query: 180 -------------------------NHESRPTGTTPFPEVNAVNFNNR---------GRG 239
                                    NHE RPTG+ PFPE N    N +            
Sbjct: 121 RITSQLNLYGEKITVAEQNNELLMKNHELRPTGSAPFPEANVSLHNGQELKETHHANSSV 180

Query: 240 RGRGRGRDRGRGRNSYYFRGGHSNHPNFKRTTRNDDHKGKAPQGKNSKDDEHKCFRYGMT 299
           RGRGRGR RGRG     F   HS    +++  R + ++ +  +G+N     + C+R G  
Sbjct: 181 RGRGRGRGRGRGYRYGCFENSHS----YQKWDRKNGNREEKEKGENV---TNVCYRCGGK 240

Query: 300 GHWSRVCRTSKHLVDLYQASLKEKGKNVEANFAHQDND-IFDQFNMTNLDVADFFESPE 315
           GHWSRVCRT KHLVDLYQ S+K+KGK VE N  ++D +  FD  N T+L+VADF  + E
Sbjct: 241 GHWSRVCRTQKHLVDLYQQSIKQKGKKVETNLVYKDGEGDFDDGNTTHLEVADFLSTRE 292

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_017250847.19.3e-7760.15PREDICTED: uncharacterized protein LOC108221484 [Daucus carota subsp. sativus][more]
WP_217833168.12.7e-7666.94hypothetical protein, partial [Synechococcus sp. PCC 7002][more]
XP_038970581.12.7e-7648.13uncharacterized protein LOC120104123 [Phoenix dactylifera][more]
XP_023919902.11.0e-7555.02uncharacterized protein LOC112031443 [Quercus suber][more]
XP_024028194.11.0e-7549.02uncharacterized protein LOC112093620 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A286QJ359.4e-7547.86Gag OS=Vitis vinifera OX=29760 GN=Gag PE=4 SV=1[more]
A0A6P4NLU72.1e-7455.40uncharacterized protein LOC108481702 OS=Gossypium arboreum OX=29729 GN=LOC108481... [more]
A0A2N9I8631.8e-7347.62CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4793... [more]
A0A2N9IT141.8e-7347.09Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55560 PE=4 SV=1[more]
A0A1U8N4C33.0e-7353.85uncharacterized protein LOC107944519 OS=Gossypium hirsutum OX=3635 GN=LOC1079445... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..247
NoneNo IPR availablePANTHERPTHR33325ZINC FINGER, CCHC-TYPE-RELATEDcoord: 171..288
coord: 60..170
NoneNo IPR availablePANTHERPTHR33325:SF5ZINC FINGER, CCHC-TYPE-RELATEDcoord: 171..288
NoneNo IPR availablePANTHERPTHR33325:SF5ZINC FINGER, CCHC-TYPE-RELATEDcoord: 60..170
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 230..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G038620.1CmUC02G038620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding