CmUC02G038000 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G038000
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr02: 25150748 .. 25151245 (-)
RNA-Seq Expression	CmUC02G038000
Synteny	CmUC02G038000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTGCTGGAGATGGTGTTCGATCTGAAGCCTCCCTTAGGCAACCTTTTGATTTACATAACTCTCCATCTCCCTCTGCCAAACCATCTTACCTCACTCTTCAAGCAACGTCTCCACCCATCCGAAAACCCATCCTTTTCCCCTCCCATCCCTAATCCTACAACAAGTTCCATCAACAACCTTCCTCCCTATTCTACCAAACCTACTAAAACCCCATCCTTTTCCCCTCCCATCCCTAATCCTACAACAAGTTCTATCAACAACCTTCCTCCCTCTTCTACCAAACCTACTATCTTTCGCCCCGACATAAAACATTCCACTACCTTATTGCTTTGCCATCGGATGCTGACACTGATGCCTAGCTTACTAGCCCCATTCCTACTTTGTCGGTTTCTCCTCATCACATGGAAGATGACTGGTACAATTTTTCCCTCCAACAATTGCCAGTTCTTTCAACCCAGCTCTACATTTGATGGCCGTGGCTCCATAGTTTAG

mRNA sequence

ATGCTGCTGCTGGAGATGGTGTTCGATCTGAAGCCTCCCTTAGGCAACCTTTTGATTTACATAACTCTCCATCTCCCTCTGCCAAACCATCTTACCTCACTCTTCAAGCAACGTCTCCACCCATCCGAAAACCCATCCTTTTCCCCTCCCATCCCTAATCCTACAACAAGTTCCATCAACAACCTTCCTCCCTATTCTACCAAACCTACTAAAACCCCATCCTTTTCCCCTCCCATCCCTAATCCTACAACAAGTTCTATCAACAACCTTCCTCCCTCTTCTACCAAACCTACTATCTTTCGCCCCGACATAAAACATTCCACTACCTTATTGCTTTGCCATCGGATGCTGACACTGATGCCTAGCTTACTAGCCCCATTCCTACTTTGTCGGTTTCTCCTCATCACATGGAAGATGACTGGTACAATTTTTCCCTCCAACAATTGCCAGTTCTTTCAACCCAGCTCTACATTTGATGGCCGTGGCTCCATAGTTTAG

Coding sequence (CDS)

ATGCTGCTGCTGGAGATGGTGTTCGATCTGAAGCCTCCCTTAGGCAACCTTTTGATTTACATAACTCTCCATCTCCCTCTGCCAAACCATCTTACCTCACTCTTCAAGCAACGTCTCCACCCATCCGAAAACCCATCCTTTTCCCCTCCCATCCCTAATCCTACAACAAGTTCCATCAACAACCTTCCTCCCTATTCTACCAAACCTACTAAAACCCCATCCTTTTCCCCTCCCATCCCTAATCCTACAACAAGTTCTATCAACAACCTTCCTCCCTCTTCTACCAAACCTACTATCTTTCGCCCCGACATAAAACATTCCACTACCTTATTGCTTTGCCATCGGATGCTGACACTGATGCCTAGCTTACTAGCCCCATTCCTACTTTGTCGGTTTCTCCTCATCACATGGAAGATGACTGGTACAATTTTTCCCTCCAACAATTGCCAGTTCTTTCAACCCAGCTCTACATTTGATGGCCGTGGCTCCATAGTTTAG

Protein sequence

MLLLEMVFDLKPPLGNLLIYITLHLPLPNHLTSLFKQRLHPSENPSFSPPIPNPTTSSINNLPPYSTKPTKTPSFSPPIPNPTTSSINNLPPSSTKPTIFRPDIKHSTTLLLCHRMLTLMPSLLAPFLLCRFLLITWKMTGTIFPSNNCQFFQPSSTFDGRGSIV

Homology

The following BLAST results are available for this feature:

BLAST of CmUC02G038000 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC02G038000 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC02G038000 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC02G038000 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G038000.1	CmUC02G038000.1	mRNA