CmUC02G036280 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G036280
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionMitochondrial transcription termination factor family protein
LocationCmU531Chr02: 20453153 .. 20457780 (+)
RNA-Seq ExpressionCmUC02G036280
SyntenyCmUC02G036280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGGTAACACTCAAATCGTTAAACAGTTGCGGAATTTTCCTTTGTTCTTCTTTCTTTCATGGCATCGCAGGCCATTCATTTCTATTCAAAACGTAGAATGAACTCATATTCAATCATTTCCTTCTTCAACTACGCCTTATGCCGCCATTTCCCCTTGATTACTTTTCTGTATCTATTGGGGTTTAAATGGATTTAAGCGCCAGTCAACATGGTACCACTATCCTGTGGTTCTTCAGGAGTAATGGGTTCGAGGAAAAAGGCATCCACGAAATGTTCACAAAGTGCAAACGGTTTGAAGGTACGCATAAAGAAATTGCCTCTGAAAACTGGGATTACTTGCAAAATATTGGAATTCAAGAGAGAAAGCTCCGTTACATGGTTTCCAAGTACCCCAAAATTCTTACCATTTGTCTGAATGGGAAGCTTGTTCCCATGGTCGAGTGCCTTGCAACTCTGGGTACTAAGCCCTTTGATGTTGCTTCGGCCATTTCCAAATTTCCTTGCATGCTTTTTCATATCATGGAAGAGAAGCTTTGCCCACTTTTGGCTTTTTTTTCAGGCATTGGATATCCCTGAGAAGCAGCCTGGGAAGACGATTTTGCTTAATCCCAGGCTTATTAGCTACAGCATTGTGCCGAAACTTTCTGAGATTGTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTATGGGGTATAGTGTCGATAAAAGGCAACGTCCTACATTAGAGTTTCTGAAATCTATGGGTTTGAAGGATGTTGATGTTCAAGCAGTTGCAGTTGGCTACCCTGAGGTTTTATGTAGGGATGCTAACAAAGTTTTGAGACCAATTTTGATTACCTGAAGAACTGTGGTTTTCAAGATGCGCAGATAGTAGCTATGGTGGCTGGTTATCCTCCTGTTTAAGCATTCTATAGAACCAGGGATCAATTTCTTGATAGAAGTTATGGGGAGAAGAATTGACGAAGTTGCTGGTTATCCGGACTTCTTTCGACATGGTTTAAAGAAGAGGCTGGAGTTATGACACAAAATTTTGAAACAAAACAATATGGAGTGTAGTTTGAGTGAAATGCTGGATTGTAATCAAAACAAGTTTGTAATGAAGTTTGGTCTGTTAGATTTCCATTCTACAACATACTCTTGATTCTTCCTCTGCTCCTCCCTTACCGCAAATCAAAATTAGCTTTTCTGCACTATGTAGTTTGATTTTATAATGAGAAATAATTCGTCCACTGTATGGTTTCCTATATTTTTTGAATGATGAAGTTAAGAAACTCTAGTGGTTGGTTGGACAGTTAATTTCTTTCAAATTGTGTTTTATGTGAGCGTTTTTCTTCCTATACCTATTTTGCATTTTTTCCTTCGTATTTTTACTAATGGTTGCACGTCGAGATTTTTGGACTCATTTAAGCTGGAGAGAGCAATGATATTTGAAGTTCTGTCTTTTGTCAAATAGATCAGATTGAAGTTGGGACTTGTTATATTGGTTGCTTATTTATCATATTCATTTCATGCATTTAAGTAGTCTGTTGTTTAAGTAATCATTTAGTACAGAATCTATTATGGTTGGTTCTGTGACATTAAATAGTTATCGAATAGTTTACGAATGTGATAATTATCTCTTCTTTGTGGTGCATAGAGAAAATGTACCAAAGGGCACCATTCGCTTCTTAATTTTGTTTGAAATGTAGTTTAGACATCAGTATTCAAGACCACCATTCTCGATTATACTCTCAATACGCTTGAACGTAGTTCCTATTCTTCTGCATGTACCAGAGAATTGTGAACAGAATTTAGGTTACTTGATACTGCAGTTTCCCTTTTCACTCTGACGTCAGACATTTCTTAGAGTAGTTTTATTTAAATTTGCATACACACACTACGCACGACGCTATTTTCTTGGAGGCTAATGCATGAACAAACATATATCACACACACAAGCAATTATTTAAACTGAAGACCCCTAACCTACATACATTATTAGTAATTTACAAACATAATCAAGAATACATGATAGCCAACATTAGCATGATTGTTTGTGCCCTCATTTTACTTTTACTTTGATATGATGCCACCAATTACGGCTGCTACTATAGCTGTAGGGTCCCCGAGAATGGCCGAGACAATGGCACGAGCTGCAGTACCAGCCATCTGACCATACTTCTTGACTGTTCCTCTTGCCCCAGGACGATTTTGCAGTGATCCCTTGAGGCTTGGGATGGAAGTATGCATCTGCCTAACCTTATTCTTGTCCACATTGAAATATATGGCTTGCCAGCTTTCCACCAGCATCTCCTTCACACATGACAGATGAAGGTTGTAGGTTTTGCACTGCGACCTGTAAGACCAACCGAGTCCCTTCCCACCGCAGCTGTGACACGAGCTCGAGAGCTTGTTACACAGGTAAAGATTGTGTTTTCCATCGTCAAGGACTTGTGGGAGGTTTGCACAACAAGGATGCAGATCGAAGTCGCAACTATTGCAGTGGTACACAAATCCATTAACATAAGTTCTACATGCATCACATACTCGCTTTCCTCTGCCAGGGGGATAATAGTATAATTTAAATTCACATTTTTCATAGAAAGGATGGGTGATTCTGGGGGCACCAACGGCACAAACCTTGTGCAAGTTGAAGCCACATTGCTGGCACTTGTATTTGTAGCCTATACCAGCTTCCTTGCACCCATCACAGTTGTAGGGGATCTCTGTGTACTCGAGCCTCAGCTTGTGTCGTGGGTGCATTGGGTGAGTCATCTCTTTCTCAATCTTCATGTTTTTTGTTTTTCGTTTTTCGTTTTTCGTTTTTTTACTGTTCTTGCATTTTTGTTTCATATATTCAACTTATAAGGAGAGATTGTATTTATAAGGAGGTGAATTGGTAGCTACAAATTCATCCTGATTGGCTTCTGGAATACCTTGCAGGTAGATGCTTTGCTTAGCCTTTACGATCAGAGAATAGCTTTATTTAGTTGACATAAGAAGTATTTGTTGGGGATCCAATAAAGGTTTGTAAAGAGAATCAGATGCCATTGAAGTACATTTTTTGACACCTGTCAAATGCATCTTAGTTGAGTAGATCAATATATTCAACACTATATACAGTTTCAGTCAACTCTGCCAATTGGCTAATCAACTCTCGATTCTTGGGAATATGAAGGTATTGTCTGTAAACTCCTCTGCTTCCCTCTAGTCTAACTCAATTACTTTTGGTGATCACAACGAGCCCTCTCGGTGACCTGAAGAGCTTCGTATGTACACATCAAGTAAGTGAAATGGTAACAAAATTTCAATTTTAGTTTAGCTCACTGTTTCAGGGGAAGACTTATTGTTGATAATAGGGATGGAGGGCATGAAAGGGAAGGGACTATCGTTGGTGTTTCCCTTACTATGGAAGGCAAATAAAGGCAAATAAAGGCAGCAGTGTCCCACAGAATCTGGGTTACTCAATGAAAAGGAGGTACTGTTTTTGGATTGTAGCAACTCCTTGTCAAAACAAAAGAATTGAGCAAGTGGATCTATAAGTTGGGGTTTTGGTGCCTTTCGTAAACAAAATAAAAAGAAAGGGAAAAATATCTTTTTAGTCCTTAGGTTTTTGGTATAATTTCTATTTGGTCCCTATTTAGTCTTTAGGTTTCAAAATGTTACAATTTTACCCTTAATATTTGAGTTTTGTTTCAATTTGGTCCCTAGATTATAAAATTTACATTTTTTAATCTTTATTTTTCACTAAATACTCATTTTTCATCTTTAGTGTTAATGTAGGTTAATACATTTAAAATAATTAACTTAATTATAATTAATTAAGTCTCACTATTTTTCATCACTTTTGAAATAAAATTAAAAAAATTTACTTTATAATTACTTTTAATCAATTTATAGACATTGACTTCAATGATTGAAAGTGGATTTTTAATGAAAAATTGAGGTTAAAATGTAAATCTTAAAATCTAGGAACCAAATTGAAACAAAACTCAAATCTCATGTAAAATTATCATATTTTGAAATTGAGGAATTAAATTGAAACCAAAATCAAAACTTAAGGACTAAATGTGTAACATCTTAAAACGTAAAGACTAAATTGAAACTAGATTAAAAACTTAGAGACCAAAAAGATATTTTTTTGTAAAAAGAATTAGAATATTCTTGTATAGACCACTGTCTATTGCTTTTCTTGCAGATACACATTGCTGGATTCTGGTGATGATCTACTGCTATTATTCCTTTAGGTTCCATATGTTACTTGATATTATATTCAGATTAAGAATTACTTTTAGAGCATAGTTTATATGCACTCATCGATCAATTCTCATTAGGGATTTGTAGTTAATGTATGAATGTAGATGTTCAATCAATTTTGTTCAAGAAAAAAGAAATAAATGATGACCAATTAAAAAAAAATAATAATAAATAAATAAATTCAACTAAGTTACTTTGATGGTTACGTTCAGGTTCATGGATATGGTTTTTGGTAAGAGAAAGAATCTAAGACAAATATACATATGAATAGAATACTAAAATTTAACATTTATGGATGGATTGGATGCCATGGAAGAATACAATCGTACTCTTGCTATCAATTAA

mRNA sequence

ATGCTAAGCGCCAGTCAACATGGTACCACTATCCTGTGGTTCTTCAGGAGTAATGGGTTCGAGGAAAAAGGCATCCACGAAATGTTCACAAAGTGCAAACGGTTTGAAGGTACGCATAAAGAAATTGCCTCTGAAAACTGGGATTACTTGCAAAATATTGGAATTCAAGAGAGAAAGCTCCGTTACATGGTTTCCAAGTACCCCAAAATTCTTACCATTTGTCTGAATGGGAAGCTTGTTCCCATGGTCGAGTGCCTTGCAACTCTGGGTACTAAGCCCTTTGATCCTGGGAAGACGATTTTGCTTAATCCCAGGCTTATTAGCTACAGCATTGTGCCGAAACTTTCTGAGATTGTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTATGGGGTATAGTGTCGATAAAAGGCAACGTCCTACATTAGAGTTTCTGAAATCTATGGGTTTGAAGGATGTTGATGTTCAAGCAGTTGCAGTTGGCTACCCTGAGACATCAGTATTCAAGACCACCATTCTCGATTATACTCTCAATACGCTTGAACGTTTTGCACTGCGACCTGTAAGACCAACCGAGTCCCTTCCCACCGCAGCTGTGACACGAGCTCGAGAGCTTGTTACACAGGTAAAGATTGTGTTTTCCATCGTCAAGGACTTGTGGGAGGTTTGCACAACAAGGATGCAGATCGAAGTCGCAACTATTGCAGTGGTACACAAATCCATTAACATAAAAAGGATGGGTGATTCTGGGGGCACCAACGGCACAAACCTTGTGCAAGTTGAAGCCACATTGCTGGCACTTGTATTTGTAGCCTATACCAGCTTCCTTGCACCCATCACAGTTGTAGGGGATCTCTGTGTACTCGAGCCTCAGCTTGTGTCGTGGGTGCATTGGGGATTGGATGCCATGGAAGAATACAATCGTACTCTTGCTATCAATTAA

Coding sequence (CDS)

ATGCTAAGCGCCAGTCAACATGGTACCACTATCCTGTGGTTCTTCAGGAGTAATGGGTTCGAGGAAAAAGGCATCCACGAAATGTTCACAAAGTGCAAACGGTTTGAAGGTACGCATAAAGAAATTGCCTCTGAAAACTGGGATTACTTGCAAAATATTGGAATTCAAGAGAGAAAGCTCCGTTACATGGTTTCCAAGTACCCCAAAATTCTTACCATTTGTCTGAATGGGAAGCTTGTTCCCATGGTCGAGTGCCTTGCAACTCTGGGTACTAAGCCCTTTGATCCTGGGAAGACGATTTTGCTTAATCCCAGGCTTATTAGCTACAGCATTGTGCCGAAACTTTCTGAGATTGTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTATGGGGTATAGTGTCGATAAAAGGCAACGTCCTACATTAGAGTTTCTGAAATCTATGGGTTTGAAGGATGTTGATGTTCAAGCAGTTGCAGTTGGCTACCCTGAGACATCAGTATTCAAGACCACCATTCTCGATTATACTCTCAATACGCTTGAACGTTTTGCACTGCGACCTGTAAGACCAACCGAGTCCCTTCCCACCGCAGCTGTGACACGAGCTCGAGAGCTTGTTACACAGGTAAAGATTGTGTTTTCCATCGTCAAGGACTTGTGGGAGGTTTGCACAACAAGGATGCAGATCGAAGTCGCAACTATTGCAGTGGTACACAAATCCATTAACATAAAAAGGATGGGTGATTCTGGGGGCACCAACGGCACAAACCTTGTGCAAGTTGAAGCCACATTGCTGGCACTTGTATTTGTAGCCTATACCAGCTTCCTTGCACCCATCACAGTTGTAGGGGATCTCTGTGTACTCGAGCCTCAGCTTGTGTCGTGGGTGCATTGGGGATTGGATGCCATGGAAGAATACAATCGTACTCTTGCTATCAATTAA

Protein sequence

MLSASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPFDPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLKSMGLKDVDVQAVAVGYPETSVFKTTILDYTLNTLERFALRPVRPTESLPTAAVTRARELVTQVKIVFSIVKDLWEVCTTRMQIEVATIAVVHKSINIKRMGDSGGTNGTNLVQVEATLLALVFVAYTSFLAPITVVGDLCVLEPQLVSWVHWGLDAMEEYNRTLAIN
Homology
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BLAST of CmUC02G036280 vs. NCBI nr
Match: XP_031744171.1 (LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 1.5e-58
Identity = 126/207 (60.87%), Postives = 142/207 (68.60%), Query Frame = 0 

Query: 8   GTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLRYMVSKY 67
           G   LWFF S GFEEK I +   KCK+ EG   EIAS+NWDYL+NIGI ER+LR+M SKY
Sbjct: 173 GARRLWFFWSKGFEEKSISKCSQKCKQLEGMPXEIASQNWDYLKNIGIHERQLRHMFSKY 232

Query: 68  PKILTICLNGKLVPMVECLATLGTKPFD-------------------------------- 127
           PKILTICLNG LV MVECLATLG+ P +                                
Sbjct: 233 PKILTICLNGXLVLMVECLATLGSHPHEFASAVAQFPYMLFHSMEDKLCPRLAFFQALDI 292

Query: 128 ----PGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKR 179
                GK ILLNPRLI YSIVPKL+EIVDF A+FGLDK+G+I KVLVKYPFLMGYSVDK 
Sbjct: 293 PEKLLGKMILLNPRLIRYSIVPKLTEIVDFHANFGLDKQGLIDKVLVKYPFLMGYSVDKT 352

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BLAST of CmUC02G036280 vs. NCBI nr
Match: XP_021301114.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Herrania umbratica])

HSP 1 Score: 234.2 bits (596), Expect = 1.6e-57
Identity = 123/213 (57.75%), Postives = 147/213 (69.01%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCKR +G  KE ASENW YL++IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKETASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTKPFDP------------------------- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK  +                          
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVAYAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 -----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMG 179
                      GK ILLNPRLISYSI  KL+EIVDFLAS GL +EGMIGKVL KYPF+MG
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLASLGLTREGMIGKVLSKYPFIMG 182

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BLAST of CmUC02G036280 vs. NCBI nr
Match: EOX98953.1 (Mitochondrial transcription termination factor family protein [Theobroma cacao])

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-57
Identity = 122/213 (57.28%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCKR +G  KE ASENW YL++IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTKPFDP------------------------- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK  +                          
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 -----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMG 179
                      GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL KYPF+MG
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFIMG 182

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BLAST of CmUC02G036280 vs. NCBI nr
Match: OMO72115.1 (Mitochodrial transcription termination factor-related protein [Corchorus capsularis])

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-57
Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 0 

Query: 3   SASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLRY 62
           ++SQ+G++I+WFFR  GF++K I+EMF KCKR EG  KE ASENW YL++IGIQERKL  
Sbjct: 4   ASSQNGSSIMWFFRDKGFDDKSINEMFKKCKRLEGAQKERASENWSYLKSIGIQERKLPS 63

Query: 63  MVSKYPKILTICLNGKLVPMVECLATLGTKPFDP-------------------------- 122
           +VS+ PKILT  LN KLVPMVECLATLGTK  +                           
Sbjct: 64  VVSRCPKILTFGLNEKLVPMVECLATLGTKRREVASAIVRFPHIMSHSVEEKLCPLLAFF 123

Query: 123 ----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGY 179
                     GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL +YPF+MGY
Sbjct: 124 QALGVPEKQLGKMILLNPRLISYSIDSKLTEIVDFLATLGLAREGMIGKVLARYPFIMGY 183

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BLAST of CmUC02G036280 vs. NCBI nr
Match: XP_007043122.2 (PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial [Theobroma cacao])

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-57
Identity = 121/213 (56.81%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCKR +G  KE ASENW YL++IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTKPFDP------------------------- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK  +                          
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 -----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMG 179
                      GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL KYPF+MG
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFIMG 182

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BLAST of CmUC02G036280 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 8.4e-49
Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK+ E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKP---------FDP---------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P         F P                      
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFLMGYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CmUC02G036280 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-11
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0 

Query: 48  DYLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPFDPGKTILLNPRLI 107
           ++L ++GI +  +  ++ K P+I  I L   L P +  L TLG       K I   P ++
Sbjct: 237 EFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAIL 296

Query: 108 SYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLKSMGLKDV 167
           +YS   KL+  V+FL+  GL +E  IG++L + P +M YSV+ + RPT+E+ +S+   +V
Sbjct: 297 TYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NV 356

Query: 168 DVQAVAVGYPET 180
           DV  +    P+T
Sbjct: 357 DVAVLLHRCPQT 363

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BLAST of CmUC02G036280 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-07
Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 0 

Query: 49  YLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLAT-LGTKPFDPGKTILLNPRLI 108
           +LQ +GI    +  M+ K+P +LT  L  K+ P+V  L T  G    D GK I ++P L+
Sbjct: 430 FLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALL 489

Query: 109 SYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLK 161
             SI  KL   + +  S G+ +   +G+++  +P L+ Y+VD   RP   +L+
Sbjct: 490 GCSIGTKLEPNMRYYISLGI-RFYQLGEMIADFPMLLRYNVD-NLRPKYRYLR 540

[Close]
BLAST of CmUC02G036280 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-07
Identity = 28/130 (21.54%), Postives = 65/130 (50.00%), Query Frame = 0 

Query: 49  YLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPFDPGKTILLNPRLIS 108
           YLQ + ++   +  ++ +YP++L   L G +   V  L  +G      G  I   P ++ 
Sbjct: 177 YLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLG 236

Query: 109 YSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLKSMGLKDVD 168
             +   +   V+ L   GL +   I +++ K P+++G+ + ++ +P +E L  +G++   
Sbjct: 237 MRVGKIIKPFVEHLEGIGLQRLA-IARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEA 296

Query: 169 VQAVAVGYPE 179
           + ++ + YP+
Sbjct: 297 LASIVMQYPD 305

[Close]
BLAST of CmUC02G036280 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.6e-07
Identity = 26/130 (20.00%), Postives = 64/130 (49.23%), Query Frame = 0 

Query: 49  YLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPFDPGKTILLNPRLIS 108
           YLQ + I+   +  ++ +YP++L   L G +   V  L  +G    + G  +   P ++ 
Sbjct: 221 YLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILG 280

Query: 109 YSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLKSMGLKDVD 168
             +   +  +V++L   G+ +     +++ K P ++G+ +D   +P ++ L+   +++  
Sbjct: 281 MRVARIIKPLVEYLEVLGIPRLA-AARLIEKRPHILGFELDDTVKPNVQILQDFNVRETS 340

Query: 169 VQAVAVGYPE 179
           + ++   YPE
Sbjct: 341 LPSIIAQYPE 349

[Close]
BLAST of CmUC02G036280 vs. ExPASy TrEMBL
Match: A0A6J1BSC3 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Herrania umbratica OX=108875 GN=LOC110429412 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.8e-58
Identity = 123/213 (57.75%), Postives = 147/213 (69.01%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCKR +G  KE ASENW YL++IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKETASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTKPFDP------------------------- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK  +                          
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVAYAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 -----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMG 179
                      GK ILLNPRLISYSI  KL+EIVDFLAS GL +EGMIGKVL KYPF+MG
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLASLGLTREGMIGKVLSKYPFIMG 182

[Close]
BLAST of CmUC02G036280 vs. ExPASy TrEMBL
Match: A0A5B6Z9F0 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009937 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 121/211 (57.35%), Postives = 144/211 (68.25%), Query Frame = 0 

Query: 4   ASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLRYM 63
           ++ H  +++WFF+  GF++K I EMF KCKR EG  KE ASENW YL +IGIQERK+  +
Sbjct: 4   SNSHNASLMWFFKDRGFDDKNIREMFKKCKRLEGVQKERASENWTYLTSIGIQERKIPSL 63

Query: 64  VSKYPKILTICLNGKLVPMVECLATLGTKPFDP--------------------------- 123
           VSK PKILTI LN KLVPMV+CLATLGTKP +                            
Sbjct: 64  VSKCPKILTIGLNEKLVPMVQCLATLGTKPSEVASAITKFPQILSHSVEEKLCPLLAFFQ 123

Query: 124 ---------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYS 179
                    GK +LLNPR+ISYSI  KLS+IVDFLAS GL KEGMIGKVLVKYPF+MGYS
Sbjct: 124 ALGVPEKQLGKMLLLNPRIISYSIESKLSKIVDFLASLGLTKEGMIGKVLVKYPFIMGYS 183

[Close]
BLAST of CmUC02G036280 vs. ExPASy TrEMBL
Match: A0A061E9I9 (Mitochondrial transcription termination factor family protein OS=Theobroma cacao OX=3641 GN=TCM_007613 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 122/213 (57.28%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCKR +G  KE ASENW YL++IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTKPFDP------------------------- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK  +                          
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 -----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMG 179
                      GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL KYPF+MG
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFIMG 182

[Close]
BLAST of CmUC02G036280 vs. ExPASy TrEMBL
Match: A0A1R3HP25 (Mitochodrial transcription termination factor-related protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17938 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57
Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 0 

Query: 3   SASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLRY 62
           ++SQ+G++I+WFFR  GF++K I+EMF KCKR EG  KE ASENW YL++IGIQERKL  
Sbjct: 4   ASSQNGSSIMWFFRDKGFDDKSINEMFKKCKRLEGAQKERASENWSYLKSIGIQERKLPS 63

Query: 63  MVSKYPKILTICLNGKLVPMVECLATLGTKPFDP-------------------------- 122
           +VS+ PKILT  LN KLVPMVECLATLGTK  +                           
Sbjct: 64  VVSRCPKILTFGLNEKLVPMVECLATLGTKRREVASAIVRFPHIMSHSVEEKLCPLLAFF 123

Query: 123 ----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGY 179
                     GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL +YPF+MGY
Sbjct: 124 QALGVPEKQLGKMILLNPRLISYSIDSKLTEIVDFLATLGLAREGMIGKVLARYPFIMGY 183

[Close]
BLAST of CmUC02G036280 vs. ExPASy TrEMBL
Match: A0A1R3KSP4 (Mitochodrial transcription termination factor-related protein OS=Corchorus olitorius OX=93759 GN=COLO4_04808 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 121/212 (57.08%), Postives = 146/212 (68.87%), Query Frame = 0 

Query: 3   SASQHGTTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNIGIQERKLRY 62
           ++SQ+G++I+WFFR  GF++K I+EMF KCKR +G  KE ASENW YL++IGIQERKL  
Sbjct: 4   ASSQNGSSIMWFFRDKGFDDKSINEMFKKCKRLQGAQKERASENWSYLKSIGIQERKLPS 63

Query: 63  MVSKYPKILTICLNGKLVPMVECLATLGTKPFDP-------------------------- 122
           +VS+ PKILT  LN KLVPMVECLATLGTK  +                           
Sbjct: 64  VVSRCPKILTFGLNEKLVPMVECLATLGTKRHEVASAIVRFPHIISHSVEEKLCPLLAFF 123

Query: 123 ----------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGY 179
                     GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL +YPF+MGY
Sbjct: 124 QALGVPEKQLGKMILLNPRLISYSIDSKLTEIVDFLATLGLAREGMIGKVLARYPFIMGY 183

[Close]
BLAST of CmUC02G036280 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 5.9e-50
Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK+ E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKP---------FDP---------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P         F P                      
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFLMGYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CmUC02G036280 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 5.9e-50
Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK+ E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKP---------FDP---------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P         F P                      
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFLMGYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CmUC02G036280 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 5.9e-50
Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKRFEGTHKEIASENWDYLQNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK+ E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKP---------FDP---------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P         F P                      
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFLMGYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CmUC02G036280 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-13
Identity = 35/130 (26.92%), Postives = 74/130 (56.92%), Query Frame = 0 

Query: 49  YLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPFDPGKTILLNPRLIS 108
           +L+ + ++++ L Y++ KYP++L   L G +   V  L ++G  P D G  +   P L+ 
Sbjct: 186 FLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLG 245

Query: 109 YSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLKSMGLKDVD 168
             +   +  +VD+L S GL K+ ++ ++L K  +++GY++++  +P ++ L S G+K   
Sbjct: 246 MRVGTMIKPLVDYLISIGLPKK-IVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKEL 305

Query: 169 VQAVAVGYPE 179
           +  +   YP+
Sbjct: 306 LPLLIAQYPQ 314

[Close]
BLAST of CmUC02G036280 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 72.0 bits (175), Expect = 9.9e-13
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0 

Query: 48  DYLQNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPFDPGKTILLNPRLI 107
           ++L ++GI +  +  ++ K P+I  I L   L P +  L TLG       K I   P ++
Sbjct: 237 EFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAIL 296

Query: 108 SYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLMGYSVDKRQRPTLEFLKSMGLKDV 167
           +YS   KL+  V+FL+  GL +E  IG++L + P +M YSV+ + RPT+E+ +S+   +V
Sbjct: 297 TYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NV 356

Query: 168 DVQAVAVGYPET 180
           DV  +    P+T
Sbjct: 357 DVAVLLHRCPQT 363

The following BLAST results are available for this feature:
BLAST of CmUC02G036280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744171.11.5e-5860.87LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mito... [more]
XP_021301114.11.6e-5757.75transcription termination factor MTERF6, chloroplastic/mitochondrial [Herrania u... [more]
EOX98953.12.8e-5757.28Mitochondrial transcription termination factor family protein [Theobroma cacao][more]
OMO72115.16.1e-5757.55Mitochodrial transcription termination factor-related protein [Corchorus capsula... [more]
XP_007043122.26.1e-5756.81PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial ... [more]
BLAST of CmUC02G036280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL68.4e-4951.44Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
F4JVI31.4e-1134.09Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL32.7e-0732.74Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
B6TGN42.7e-0721.54Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT... [more]
Q9ZT964.6e-0720.00Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of CmUC02G036280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BSC37.8e-5857.75transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Herrania... [more]
A0A5B6Z9F01.0e-5757.35Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009937 PE=3 SV=1[more]
A0A061E9I91.3e-5757.28Mitochondrial transcription termination factor family protein OS=Theobroma cacao... [more]
A0A1R3HP253.0e-5757.55Mitochodrial transcription termination factor-related protein OS=Corchorus capsu... [more]
A0A1R3KSP43.9e-5757.08Mitochodrial transcription termination factor-related protein OS=Corchorus olito... [more]
BLAST of CmUC02G036280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38160.15.9e-5051.44Mitochondrial transcription termination factor family protein [more]
AT4G38160.25.9e-5051.44Mitochondrial transcription termination factor family protein [more]
AT4G38160.35.9e-5051.44Mitochondrial transcription termination factor family protein [more]
AT2G44020.14.4e-1326.92Mitochondrial transcription termination factor family protein [more]
AT4G14605.19.9e-1334.09Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 134..165
e-value: 4.4E-7
score: 39.5
coord: 97..128
e-value: 0.13
score: 21.3
coord: 61..92
e-value: 34.0
score: 13.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 14..200
e-value: 4.5E-17
score: 61.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 50..178
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 10..93
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 76..201
e-value: 3.3E-14
score: 54.6
NoneNo IPR availablePANTHERPTHR13068:SF5TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIALcoord: 50..178
coord: 10..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G036280.1CmUC02G036280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0032502 developmental process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0003690 double-stranded DNA binding