CmUC02G034790 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G034790
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr02: 11714346 .. 11716127 (-)
RNA-Seq Expression	CmUC02G034790
Synteny	CmUC02G034790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCATGGAAGCCGTTGGTGCCGAGGAAATGGAGGCGGTAGCCGAGGAGAGAGAGGAGGAGGAGGAAAATTGTAGCGTCCAAGATTGTGTCAATGCCTCTTTTGATTGCAACTCGTTCGAACAGAGGAGCGGCCATTGGTGATTTGGTTAGACACGAAATTGTTGTCATATCAGAAGTTCTAAAATTGGAAAAGCTCTAAATACATAAAACAAGGTGGATGCCCATATTGAAGGGTTCAAATGATTTTTGGCCTCTCCCCAGATTTTTAATGAAATATGATTTTTTGCTGACATCAATGTTGTGTGAATTTATCGAACTACTCCCAAAATCGTTATCCAGAGGCATCCCCACAAGTTCTGCTCTCGACTCTCGATCTTGTTTCTCGATTCCTATTATCGACACTCGGTCTCAATCCACGATGGTCAACCATAGTTGACCTTATAGACGAGATCACTCTCGGTCTCACTCTCTTGCTACTCTCGCTCTCATTCCTCGTAAGCTGACACTCAACCATTGTATTAGATTTTTGGGTAATTAATGTGTGTCGTACATCAATCAATCTAACAGTAAACACGACCTTTCAAATCAATTGAGTGAATCAAGTTAATTGTTTAACAAGTTTCTCTTCATATGTGTACACTTTTCCACTCAAAAAACCAAACAAAGCAAAGCAAACAAAAAAACCTCAGAAATCTCACTATCTCGTGGAAAATCCATAGACATTTTATATAACTAAGCAATCAACTTCGAACTCCAAGTAAGTAATCCATGGACTTCAAAATTTTTCCCTTCTATTTAACATTGTATTATCACAAAACTGTTGGGTGACTTTTGGCACAATCACGAGAGAGCGAGAGACGAGCTAGAGATAGATAATGTTTAACGACTTAGAGCGAGCTACAAGATTACACGAAGTGAGGGTCGAGAGTAGAACACGTGGTGGTAGGAATTGGGTAAGTACTAGGCAAGAGGACCAAGAGCTAATGAGAGGATCAAGATTCGAGAGCACGAAAAGATGATTGTACTATTTCGTGACAAGAACCGAGAAACAAAGCGAGATGCAAGAGCGAGAAGCGAGAGCGAGAGTTTGTAACGAGGAGTGAGACTCGTTAGCGAGATTTTGACAGAAAGCATTATTTTGTAATTGGCTTTTCTTTTTTTCTCTTTTGAAGGATGGATAGGAAGCAATTGTTTATTCGACATGGTGGGACATGGGATGACATCAAACAAAGTTACGACGGAGGTGTTTTAAAGGGCATCGTTGTGTCAATCACATTGACATACCAAGAACTGAAGGACCGGGCATATGGAATAGCAAGGGTAGATCCATCATAGTTCGACATTGTAAATATAAGGGTTCAGTATAAGTTGGACTCGTATGGACCTGCGGTATGCATAATCGACAATGACAACATTAGATTTCTGTTGGTAGAGGCGAATTTGAATAGACCTCAGATTTTTGTCAGTATTGAGAGGAACAATCTGACAAAGCATCAGGAGTATTACATAGAATATCAAACAGAACATCAGACTGAACTATGGATAGAACAACACACCATTGGTGAGTCTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACAACACTAATTCATGGAATGAAAGAGATGTTTCACAACATTATAATGGTCGGAAGAGGGTCGGTAATTCTGAAGGAGATGCACCCATGGTTAATGATTTGAATTTCAATTCTAAAGGTGAGTGGGTTAAGAATAATCATGAGGATGTTGGGTGGGATCCTCATGTAAATTAG

mRNA sequence

ATGGAGGCCATGGAAGCCGTTGGTGCCGAGGAAATGGAGGCGGTAGCCGAGGAGAGAGAGGAGGAGGAGGAAAATTGTAGCGTCCAAGATTGTGTCAATGCCTCTTTTGATTGCAACTCGTTCGAACAGAGGAGCGGCCATTGGATGGATAGGAAGCAATTGTTTATTCGACATGGTGGGACATGGGATGACATCAAACAAAGTTACGACGGAGGTGTTTTAAAGGGCATCGTTGTGTCAATCACATTGACATACCAAGAACTGAAGGACCGGGCGAATTTGAATAGACCTCAGATTTTTGTCAGTATTGAGAGGAACAATCTGACAAAGCATCAGGAGTATTACATAGAATATCAAACAGAACATCAGACTGAACTATGGATAGAACAACACACCATTGGTGAGTCTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACAACACTAATTCATGGAATGAAAGAGATGTTTCACAACATTATAATGGTCGGAAGAGGGTCGGTAATTCTGAAGGAGATGCACCCATGGTTAATGATTTGAATTTCAATTCTAAAGGTGAGTGGGTTAAGAATAATCATGAGGATGTTGGGTGGGATCCTCATGTAAATTAG

Coding sequence (CDS)

ATGGAGGCCATGGAAGCCGTTGGTGCCGAGGAAATGGAGGCGGTAGCCGAGGAGAGAGAGGAGGAGGAGGAAAATTGTAGCGTCCAAGATTGTGTCAATGCCTCTTTTGATTGCAACTCGTTCGAACAGAGGAGCGGCCATTGGATGGATAGGAAGCAATTGTTTATTCGACATGGTGGGACATGGGATGACATCAAACAAAGTTACGACGGAGGTGTTTTAAAGGGCATCGTTGTGTCAATCACATTGACATACCAAGAACTGAAGGACCGGGCGAATTTGAATAGACCTCAGATTTTTGTCAGTATTGAGAGGAACAATCTGACAAAGCATCAGGAGTATTACATAGAATATCAAACAGAACATCAGACTGAACTATGGATAGAACAACACACCATTGGTGAGTCTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACAACACTAATTCATGGAATGAAAGAGATGTTTCACAACATTATAATGGTCGGAAGAGGGTCGGTAATTCTGAAGGAGATGCACCCATGGTTAATGATTTGAATTTCAATTCTAAAGGTGAGTGGGTTAAGAATAATCATGAGGATGTTGGGTGGGATCCTCATGTAAATTAG

Protein sequence

MEAMEAVGAEEMEAVAEEREEEEENCSVQDCVNASFDCNSFEQRSGHWMDRKQLFIRHGGTWDDIKQSYDGGVLKGIVVSITLTYQELKDRANLNRPQIFVSIERNNLTKHQEYYIEYQTEHQTELWIEQHTIGESDIFPSVVSMGNDNTNSWNERDVSQHYNGRKRVGNSEGDAPMVNDLNFNSKGEWVKNNHEDVGWDPHVN

Homology

[Close]

BLAST of CmUC02G034790 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia])

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-05
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 52 KQLFIRHGGTWDDIKQSYDGGVLKGIVVSITLTYQELKDR 92
          K LFIR GGTW+D   SY GG LKGI+V +T+TY+ELK+R
Sbjct: 5  KSLFIRFGGTWEDNTNSYVGGELKGIIVPLTVTYKELKNR 44

[Close]

BLAST of CmUC02G034790 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 52 KQLFIRHGGTWDDIKQSYDGGVLKGIVVSITLTYQELKDR 92
          K LFIR GGTW+D   SY GG LKGI+V +T+TY+ELK+R
Sbjct: 5  KSLFIRFGGTWEDNTNSYVGGELKGIIVPLTVTYKELKNR 44

[Close]

BLAST of CmUC02G034790 vs. ExPASy TrEMBL
Match: A0A6J1DPC2 (uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.0e-04
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 49 MDRKQLFIRHGGTWDDIKQSYDGGVLKGIVVSITLTYQELKD 91
          M R ++F+R+GG W+D +  Y GG+LKGIVV   +TYQ+L D
Sbjct: 1  MTRVRIFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLD 42

[Close]

BLAST of CmUC02G034790 vs. ExPASy TrEMBL
Match: A0A6J1DRN0 (uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.0e-04
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 49 MDRKQLFIRHGGTWDDIKQSYDGGVLKGIVVSITLTYQELKD 91
          M R ++F+R+GG W+D +  Y GG+LKGIVV   +TYQ+L D
Sbjct: 1  MTRVRIFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLD 42

The following BLAST results are available for this feature:

BLAST of CmUC02G034790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154925.1	3.4e-05	65.00	uncharacterized protein LOC111022071 [Momordica charantia]	[more]

BLAST of CmUC02G034790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G034790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DL08	1.6e-05	65.00	uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DPC2	9.0e-04	52.38	uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DRN0	9.0e-04	52.38	uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmUC02G034790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G034790.1	CmUC02G034790.1	mRNA