CmUC02G034540 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G034540
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionDUF4228 domain protein
LocationCmU531Chr02: 10986741 .. 10987181 (+)
RNA-Seq ExpressionCmUC02G034540
SyntenyCmUC02G034540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATAATTGCTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCTACCGAAGTTAAGAAAGTTGAGGAAAAATCGCCGGCTGGATCGGCAATGGCGAAGCCGAAGACGGCAGAGGCGAGAGCCGGTGGTGCGAGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGAGGAGAAAAATTCCGGCGGAAGTGGCAGCGATGCTGGAGTACTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAACAGATGTTGACGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAGAGGCAGAACGACGATTTCAGATGCGAGAATCGATCAAGTTGAAGATGAAAATGGAAGCTGGAAGCCGGATCTGGAATCTATTCCTGAAGGTCTCCATTAA

mRNA sequence

ATGGGGAATAATTGCTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCTACCGAAGTTAAGAAAGTTGAGGAAAAATCGCCGGCTGGATCGGCAATGGCGAAGCCGAAGACGGCAGAGGCGAGAGCCGGTGGTGCGAGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGAGGAGAAAAATTCCGGCGGAAGTGGCAGCGATGCTGGAGTACTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAACAGATGTTGACGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAGAGGCAGAACGACGATTTCAGATGCGAGAATCGATCAAGTTGAAGATGAAAATGGAAGCTGGAAGCCGGATCTGGAATCTATTCCTGAAGGTCTCCATTAA

Coding sequence (CDS)

ATGGGGAATAATTGCTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCTACCGAAGTTAAGAAAGTTGAGGAAAAATCGCCGGCTGGATCGGCAATGGCGAAGCCGAAGACGGCAGAGGCGAGAGCCGGTGGTGCGAGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGAGGAGAAAAATTCCGGCGGAAGTGGCAGCGATGCTGGAGTACTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAACAGATGTTGACGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAGAGGCAGAACGACGATTTCAGATGCGAGAATCGATCAAGTTGAAGATGAAAATGGAAGCTGGAAGCCGGATCTGGAATCTATTCCTGAAGGTCTCCATTAA

Protein sequence

MGNNCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKLQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTTISDARIDQVEDENGSWKPDLESIPEGLH
Homology
BLAST of CmUC02G034540 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/144 (86.81%), Postives = 127/144 (88.19%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFK 60
           MGNNCFKSNKVMAQDEP+DLLPP E KKVEEK   GSAMAKPKTAEAR GGASKKVVRFK
Sbjct: 1   MGNNCFKSNKVMAQDEPEDLLPPIEAKKVEEKPRPGSAMAKPKTAEARTGGASKKVVRFK 60

Query: 61  LQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTTIS 120
           LQEEEEKNSG    D GVLRIKVVMSQKELKQML DRENNSCTLEELI ELKV+GRTTIS
Sbjct: 61  LQEEEEKNSG----DGGVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVKGRTTIS 120

Query: 121 DARIDQVEDENGSWKPDLESIPEG 145
           D RID VEDENG WKPDLE IPEG
Sbjct: 121 DGRIDAVEDENGRWKPDLEGIPEG 140

BLAST of CmUC02G034540 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.7 bits (483), Expect = 9.2e-45
Identity = 112/153 (73.20%), Postives = 125/153 (81.70%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLL---PPTEVKKVEEKSPAGSAMAKPKTAEARAGGAS-KKV 60
           MGN+CFKSNKVMAQDE    L   PP E KKVEEK  AGSAMAKPKTAE R+G A+ KKV
Sbjct: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60

Query: 61  VRFKLQEEEEKNSGGSGSD---AGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
           VRFKLQEE+E NSGGSG D   AGVLRIKVVMSQ+ELKQ+L + EN+S +LEELIAE KV
Sbjct: 61  VRFKLQEEDE-NSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKV 120

Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEGLH 147
           +GRTT+SDA  D+VEDENGS +P LE IPEGLH
Sbjct: 121 KGRTTVSDAITDEVEDENGSRRPALECIPEGLH 152

BLAST of CmUC02G034540 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 156.0 bits (393), Expect = 2.5e-34
Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 0

Query: 4   NCFKSNKVMAQDE-----PDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVR 63
           NC ++N+VMAQDE     P+  L  T   KVE+K  AGSA+A+PKT EAR     KKVVR
Sbjct: 45  NCLRNNRVMAQDEACSPSPNSSLTETNY-KVEDKPAAGSALARPKTEEARIAARRKKVVR 104

Query: 64  FKLQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTT 123
           F  Q+ E++ SGG G   GVLRIKVV+SQKELKQ+L DRE+NS TLEEL+AELK++GR T
Sbjct: 105 F--QQREDEISGGGG---GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR-T 164

Query: 124 ISDARIDQVEDENGSWKPDLESIPEGLH 147
           ISDAR D  EDENGSW+P LESIPE LH
Sbjct: 165 ISDARADNEEDENGSWRPALESIPEDLH 185

BLAST of CmUC02G034540 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 95/151 (62.91%), Postives = 105/151 (69.54%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVV 60
           MGN CFKSNKVMAQD+  D  PP    E KKV+++   GSAMAKPK      G A KKVV
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPK--NGTGGAAGKKVV 60

Query: 61  RFKLQEEEE----KNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
           RF LQEEE+    +NSG SG   GVLRIKVV+SQKELKQ+L  RENNSC+LEELI ELKV
Sbjct: 61  RFNLQEEEKDEEGRNSGDSG--PGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKV 120

Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
           +GR T   A      DE GSWKP LE IPEG
Sbjct: 121 KGRATTVSA------DETGSWKPALECIPEG 141

BLAST of CmUC02G034540 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 8.9e-32
Identity = 93/151 (61.59%), Postives = 105/151 (69.54%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKS-PAGSAMAKPKTAEARAGGASKKV 60
           MGN CF++NKVMAQD+  D LPP    E +KVEE+    GSAMAKPK      G A KKV
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPK--NGTGGAAGKKV 60

Query: 61  VRFKLQEEE---EKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
           VRF LQEEE   E  + G  S AGVLRIKVV+SQKELK++L +RENNSC+LEELI ELKV
Sbjct: 61  VRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKV 120

Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
           +GR T        V DE GSWKP LE IPEG
Sbjct: 121 KGRAT-------TVSDEIGSWKPALECIPEG 142

BLAST of CmUC02G034540 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 0

Query: 4   NCFKSNKVMAQDE-----PDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVR 63
           NC ++N+VMAQDE     P+  L  T   KVE+K  AGSA+A+PKT EAR     KKVVR
Sbjct: 45  NCLRNNRVMAQDEACSPSPNSSLTETNY-KVEDKPAAGSALARPKTEEARIAARRKKVVR 104

Query: 64  FKLQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTT 123
           F  Q+ E++ SGG G   GVLRIKVV+SQKELKQ+L DRE+NS TLEEL+AELK++GR T
Sbjct: 105 F--QQREDEISGGGG---GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR-T 164

Query: 124 ISDARIDQVEDENGSWKPDLESIPEGLH 147
           ISDAR D  EDENGSW+P LESIPE LH
Sbjct: 165 ISDARADNEEDENGSWRPALESIPEDLH 185

BLAST of CmUC02G034540 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.1e-33
Identity = 95/151 (62.91%), Postives = 105/151 (69.54%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVV 60
           MGN CFKSNKVMAQD+  D  PP    E KKV+++   GSAMAKPK      G A KKVV
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPK--NGTGGAAGKKVV 60

Query: 61  RFKLQEEEE----KNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
           RF LQEEE+    +NSG SG   GVLRIKVV+SQKELKQ+L  RENNSC+LEELI ELKV
Sbjct: 61  RFNLQEEEKDEEGRNSGDSG--PGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKV 120

Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
           +GR T   A      DE GSWKP LE IPEG
Sbjct: 121 KGRATTVSA------DETGSWKPALECIPEG 141

BLAST of CmUC02G034540 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32
Identity = 93/151 (61.59%), Postives = 105/151 (69.54%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKS-PAGSAMAKPKTAEARAGGASKKV 60
           MGN CF++NKVMAQD+  D LPP    E +KVEE+    GSAMAKPK      G A KKV
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPK--NGTGGAAGKKV 60

Query: 61  VRFKLQEEE---EKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
           VRF LQEEE   E  + G  S AGVLRIKVV+SQKELK++L +RENNSC+LEELI ELKV
Sbjct: 61  VRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKV 120

Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
           +GR T        V DE GSWKP LE IPEG
Sbjct: 121 KGRAT-------TVSDEIGSWKPALECIPEG 142

BLAST of CmUC02G034540 vs. ExPASy TrEMBL
Match: A0A6J1B1M6 (uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC110423293 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 0

Query: 4   NCFKSNKVMAQ-DEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKLQ 63
           NC  SNK++AQ D+P+      EV +   K  A         A+       KK+VRFKL 
Sbjct: 3   NCLTSNKIVAQNDQPEPQGCRAEVIEETGKVTASKLERAEVAADEGEKVKKKKMVRFKLN 62

Query: 64  EEEEKNSGGSG-SDAGVLRIKVVMSQKELKQMLTDREN-NSCTLEELIAELKVRGRTTIS 123
           EE + + G  G S  GV+RI++V++QKELKQ+L+ RE+    +LE LI  +K+RG     
Sbjct: 63  EENDVDGGRQGESKDGVVRIRLVVTQKELKQILSSREDLKHTSLEGLIRVMKLRGVRISE 122

Query: 124 DARIDQVEDENGSWKPDLESIPE 144
             R +  +  +G W+P LESIPE
Sbjct: 123 GGRTNDDDGFHGGWRPALESIPE 145

BLAST of CmUC02G034540 vs. ExPASy TrEMBL
Match: A0A4V3WQ11 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029836 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKL-- 63
           NC  SNK++ QDE D+   P E + +E              +     G  KK VRFKL  
Sbjct: 3   NCVTSNKILGQDEKDE--QPREERAIER-------------SVRHVDGGKKKSVRFKLHE 62

Query: 64  -QEEEEKNSGGSG------SDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVR 123
            +EEEE+   G+G      S  G +RI+VV++Q+EL ++L  +   S ++E+++ E+K++
Sbjct: 63  EEEEEEEEEDGNGEERQGCSKGGAVRIRVVVTQRELIRILNTKSKYS-SVEQMLGEMKLK 122

Query: 124 GRTTISDARIDQVEDENGSWKPDLESIPE 144
            R  IS  R    E  NGSW+P LESIPE
Sbjct: 123 SR-KISQIRSSDDEGTNGSWRPALESIPE 134

BLAST of CmUC02G034540 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 49/142 (34.51%), Postives = 78/142 (54.93%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKLQE 63
           NC + +  +A+ E DDL P   VK +EE           KT+             F+ +E
Sbjct: 3   NCLRHDNGVARKEKDDLDPEPLVKLLEE----------GKTS-------------FRGEE 62

Query: 64  EEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTTISDAR 123
           E E++   +  ++ V+RIKVV+++KEL+Q+L   +N   ++++L+  LK  GR  IS A 
Sbjct: 63  ESERS---TEEESKVVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGR-NISMAS 116

Query: 124 IDQVEDENG--SWKPDLESIPE 144
            ++ E E G  +W+P LESIPE
Sbjct: 123 YEEDEKEEGDENWRPTLESIPE 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902397.12.5e-5886.81uncharacterized protein LOC120089037 [Benincasa hispida][more]
KAG6570883.19.2e-4573.20hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022140639.12.5e-3463.51uncharacterized protein LOC111011249 [Momordica charantia][more]
KGN63254.11.1e-3262.91hypothetical protein Csa_022493 [Cucumis sativus][more]
TYK24218.18.9e-3261.59hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CG851.2e-3463.51uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A0A0LQE95.1e-3362.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1[more]
A0A5D3DKZ84.3e-3261.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1B1M61.9e-1139.86uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
A0A4V3WQ113.2e-1137.58Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0298... [more]
Match NameE-valueIdentityDescription
AT3G21680.11.5e-0834.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..146
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..144
NoneNo IPR availablePANTHERPTHR33148:SF55OS01G0219300 PROTEINcoord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G034540.1CmUC02G034540.1mRNA