CmUC02G033070 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G033070
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	GATA type zinc finger transcription factor family protein
Location	CmU531Chr02: 7567818 .. 7569257 (+)
RNA-Seq Expression	CmUC02G033070
Synteny	CmUC02G033070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCTTTTCAGGAACCACACAAAAGTGCATGGCTTGTGACAAGACAGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGGATTTTCCATAAGGCTTGTTTCCGATGCTACCATTGTAGGGGCACTCTTAAGGTATAAATAATATCCATATTTTATCCCTCTCTTCAAAAATAATAATAATAATAATCTTTTTGCTTTTTTTGTTTTTATGTTTGGAATTGGAATTGATTTCAGGGCGAGTATCACGAACATGCATTTGATGATGCCTGTTTGATGATAACAATCTCGTTTACAATTTCTTATTCTAGTAATAACTTCGAAACATGAAACCTGAAACTGTTAAGACGTTTTCAAAATAATACTTTGTTAAATAATTATTATTAGACCAAACTTGATTAATTTAACCGTCTATTTTTTGTATTTTCAACTAAGATAATACTAATTATTATTATTTATTTATTCTTTTTTTTTTTTGGTTTTGCAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTTTACTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGTTTTGAAGGCAATTATTATTATTATTATTATTATTATTATTATTTACTATGTTAATTACAAATCACAACTCTATAATTTTCCTATTTTGCAAAACCATACCCTCCTATTTTTCAAAATTATTCAAACACCCACATTGTCCAAAATCCATACCCTTAAATTTTACAAGGAGTACACTTGCAAAATAGGACATGATTTACAAAATTCATTAAAAAAAAAAAATTCCCAAAATAATTCTAAAATTGAATATTTTCTTTTCTCCAGGAACTCCAAAAGTCATGAAAGCAGAAAAGCCCACCGAAAATGAGGTATTACCCATTTGAAAAACCAAATTATTATCCAACAGGGAGCTCAATTTCATTTTTTTTTTTTTTTTTGACTATTTACTAATGATTTATATTGGAATTTGCAATTGAATAGAATGTAAAGTCAGTCTCCAACATGTTTGCTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTACTAATTGCAATCAAAATATGAAAAAAAAAAAAAAAAAAAACTAATTAATCATCTATTAAAATTTTTGTAATTACTTCGTTTTGGAGCATAATAATAAAGTTTATACTATCGATTCTAAGGTTACGGTGAACGGGACGCCATACCACAAAAGCTGCTTCAAATGTAGCCATGGAGGATGCACAATAAGCCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAGGGAAATTACAGCCAACTTGAAACTGAGCGACAAAAGAACAATTCATCAGTGGCAATGAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

mRNA sequence

ATGGCTAGCTTTTCAGGAACCACACAAAAGTGCATGGCTTGTGACAAGACAGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGGATTTTCCATAAGGCTTGTTTCCGATGCTACCATTGTAGGGGCACTCTTAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTTTACTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGAACTCCAAAAGTCATGAAAGCAGAAAAGCCCACCGAAAATGAGAATGTAAAGTCAGTCTCCAACATGTTTGCTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGCATAATAATAAAGTTTATACTATCGATTCTAAGGTTACGGTGAACGGGACGCCATACCACAAAAGCTGCTTCAAATGTAGCCATGGAGGATGCACAATAAGCCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAGGGAAATTACAGCCAACTTGAAACTGAGCGACAAAAGAACAATTCATCAGTGGCAATGAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

Coding sequence (CDS)

ATGGCTAGCTTTTCAGGAACCACACAAAAGTGCATGGCTTGTGACAAGACAGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGGATTTTCCATAAGGCTTGTTTCCGATGCTACCATTGTAGGGGCACTCTTAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTTTACTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGAACTCCAAAAGTCATGAAAGCAGAAAAGCCCACCGAAAATGAGAATGTAAAGTCAGTCTCCAACATGTTTGCTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGCATAATAATAAAGTTTATACTATCGATTCTAAGGTTACGGTGAACGGGACGCCATACCACAAAAGCTGCTTCAAATGTAGCCATGGAGGATGCACAATAAGCCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAGGGAAATTACAGCCAACTTGAAACTGAGCGACAAAAGAACAATTCATCAGTGGCAATGAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

Protein sequence

MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQLFKRTGSLDKRTPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIEKHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSSVAMKLTTPMEIAAES

Homology

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BLAST of CmUC02G033070 vs. NCBI nr
Match: XP_038888760.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 377.1 bits (967), Expect = 9.8e-101
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKV+K +KPTENEN KSVSNMFAGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVVKLDKPTENENAKSVSNMFAGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQK-NNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK NN+SVAM LT+PMEIAAES
Sbjct: 181 NYSQLETERQKNNNASVAMTLTSPMEIAAES 200

[Close]

BLAST of CmUC02G033070 vs. NCBI nr
Match: KAA0031371.1 (LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain protein GLIM1a [Cucumis melo var. makuwa])

HSP 1 Score: 375.6 bits (963), Expect = 2.8e-100
Identity = 183/212 (86.32%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK+MK EKP+ENEN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS+V  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAVAAAIKLTTPMEIAAES 201

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BLAST of CmUC02G033070 vs. NCBI nr
Match: XP_004136935.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical protein Csa_017260 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 7.7e-98
Identity = 179/212 (84.43%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKVM++EKP+ENEN KSVSNMF GTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNG  YHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS++  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of CmUC02G033070 vs. NCBI nr
Match: XP_022988956.1 (LIM domain-containing protein WLIM1-like [Cucurbita maxima])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 174/210 (82.86%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK++K EKPT+NE   + SN+FAGTRDKC+GCTKTVYP+E
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKIVKIEKPTDNEKANAKSNLFAGTRDKCAGCTKTVYPLE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK+N SVAMKL   +EIAAES
Sbjct: 181 NYSQLETERQKSN-SVAMKLGASLEIAAES 198

[Close]

BLAST of CmUC02G033070 vs. NCBI nr
Match: XP_022148729.1 (LIM domain-containing protein WLIM1-like [Momordica charantia])

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 177/210 (84.29%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKV K EKPTE EN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKV-KPEKPTETENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHK+CFKC+HGGCTISPSNYIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGTAYHKTCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQKN  SV+M LT+P+EIAAES
Sbjct: 181 NYSQLETERQKN--SVSMNLTSPVEIAAES 196

[Close]

BLAST of CmUC02G033070 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-77
Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           +F+GTTQKCMACDKTVYLVDKLTADNR++HKACFRC+HC+GTLKLSNY SFEGVLYCRPH
Sbjct: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61

Query: 63  YDQLFKRTGSLDKR---TPKVMKAEKPTENENV--KSVSNMFAGTRDKCSGCTKTVYPIE 122
           +DQ FKRTGSL+K    TPK+ K ++P E E      VSNMF GTR+KC GC KTVYPIE
Sbjct: 62  FDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIE 121

Query: 123 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 182
                      KV+VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKG
Sbjct: 122 -----------KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKG 176

Query: 183 NYSQLE 184
           N SQLE
Sbjct: 182 NLSQLE 176

[Close]

BLAST of CmUC02G033070 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 6.6e-68
Identity = 123/190 (64.74%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           M SF+GTTQKC  C+KTVYLVDKL A+ R++HKACFRC+HC  TLKLSN+ SF+GV+YCR
Sbjct: 1   MKSFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEK--PTENENVKSVSNMFAGTRDKCSGCTKTVYP 120
            H+DQLFKRTGSL+K    TPK  K E+    E ++   +S+ F GTRDKC+ C K VYP
Sbjct: 61  HHFDQLFKRTGSLEKSFDGTPK-FKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYP 120

Query: 121 IEKHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKE 180
           IE           +V V+GT YH++CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLFK+
Sbjct: 121 IE-----------RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKK 178

Query: 181 KGNYSQLETE 186
           KGNYSQLE E
Sbjct: 181 KGNYSQLEVE 178

[Close]

BLAST of CmUC02G033070 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.9e-57
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HKACF+C HC+  L+LSNY S EGV+YCRPH
Sbjct: 2   SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 61

Query: 63  YDQLFKRTGSLDK--RTPKVMKAEKPTE--NENVKSVSNMFAGTRDKCSGCTKTVYPIEK 122
           ++QLFK +GS  K  ++P     +KPT   N     ++ MF+GT+DKC+ CTKTVYPIE 
Sbjct: 62  FEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE- 121

Query: 123 HNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGN 182
                     KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+
Sbjct: 122 ----------KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 174

[Close]

BLAST of CmUC02G033070 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.3e-54
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

[Close]

BLAST of CmUC02G033070 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-49
Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT  KC  CDKTVY+VD L+ +   +HK+CFRC HC+GTL++SNY S +GVLYC+ H
Sbjct: 2   SFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIEKHNNK 122
           ++QLFK +G+  K   +  K EKP        +S++F GT+DKC+ C KTVYP+E     
Sbjct: 62  FEQLFKESGNFSKNF-QPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLE----- 121

Query: 123 VYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQL 182
                 K+ + G  +HK+CF+C+HGGCT++ S+Y + +  LYC+HH  QLF EKGNY+ +
Sbjct: 122 ------KIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHV 169

[Close]

BLAST of CmUC02G033070 vs. ExPASy TrEMBL
Match: A0A5A7SP97 (LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001270 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 183/212 (86.32%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK+MK EKP+ENEN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS+V  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAVAAAIKLTTPMEIAAES 201

[Close]

BLAST of CmUC02G033070 vs. ExPASy TrEMBL
Match: A0A0A0K2E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 179/212 (84.43%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKVM++EKP+ENEN KSVSNMF GTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNG  YHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS++  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of CmUC02G033070 vs. ExPASy TrEMBL
Match: A0A6J1JIN6 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111486161 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.0e-96
Identity = 174/210 (82.86%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK++K EKPT+NE   + SN+FAGTRDKC+GCTKTVYP+E
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKIVKIEKPTDNEKANAKSNLFAGTRDKCAGCTKTVYPLE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK+N SVAMKL   +EIAAES
Sbjct: 181 NYSQLETERQKSN-SVAMKLGASLEIAAES 198

[Close]

BLAST of CmUC02G033070 vs. ExPASy TrEMBL
Match: A0A6J1D4V0 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111017319 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 177/210 (84.29%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKV K EKPTE EN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKV-KPEKPTETENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHK+CFKC+HGGCTISPSNYIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGTAYHKTCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQKN  SV+M LT+P+EIAAES
Sbjct: 181 NYSQLETERQKN--SVSMNLTSPVEIAAES 196

[Close]

BLAST of CmUC02G033070 vs. ExPASy TrEMBL
Match: A0A6J1EIM6 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111434484 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 173/210 (82.38%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK++K EKPT+NE   + SN+FAGTRDKC+GCTKTVYP+E
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKIVKVEKPTDNEKANAKSNLFAGTRDKCAGCTKTVYPLE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK+N +VAMKL   +EIAAES
Sbjct: 181 NYSQLETERQKSN-AVAMKLGASLEIAAES 198

[Close]

BLAST of CmUC02G033070 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-78
Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           +F+GTTQKCMACDKTVYLVDKLTADNR++HKACFRC+HC+GTLKLSNY SFEGVLYCRPH
Sbjct: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61

Query: 63  YDQLFKRTGSLDKR---TPKVMKAEKPTENENV--KSVSNMFAGTRDKCSGCTKTVYPIE 122
           +DQ FKRTGSL+K    TPK+ K ++P E E      VSNMF GTR+KC GC KTVYPIE
Sbjct: 62  FDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIE 121

Query: 123 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 182
                      KV+VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKG
Sbjct: 122 -----------KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKG 176

Query: 183 NYSQLE 184
           N SQLE
Sbjct: 182 NLSQLE 176

[Close]

BLAST of CmUC02G033070 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.9e-58
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HKACF+C HC+  L+LSNY S EGV+YCRPH
Sbjct: 2   SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 61

Query: 63  YDQLFKRTGSLDK--RTPKVMKAEKPTE--NENVKSVSNMFAGTRDKCSGCTKTVYPIEK 122
           ++QLFK +GS  K  ++P     +KPT   N     ++ MF+GT+DKC+ CTKTVYPIE 
Sbjct: 62  FEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE- 121

Query: 123 HNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGN 182
                     KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+
Sbjct: 122 ----------KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 174

[Close]

BLAST of CmUC02G033070 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-55
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

[Close]

BLAST of CmUC02G033070 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-55
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

[Close]

BLAST of CmUC02G033070 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-55
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

The following BLAST results are available for this feature:

BLAST of CmUC02G033070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888760.1	9.8e-101	87.20	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
KAA0031371.1	2.8e-100	86.32	LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain prot...	[more]
XP_004136935.1	7.7e-98	84.43	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical p...	[more]
XP_022988956.1	1.2e-95	82.86	LIM domain-containing protein WLIM1-like [Cucurbita maxima]	[more]
XP_022148729.1	2.1e-95	84.29	LIM domain-containing protein WLIM1-like [Momordica charantia]	[more]

BLAST of CmUC02G033070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	1.6e-77	74.73	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	6.6e-68	64.74	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	6.9e-57	58.70	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	9.3e-54	50.72	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
Q1ECF5	1.4e-49	48.33	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]

BLAST of CmUC02G033070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SP97	1.4e-100	86.32	LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0K2E5	3.8e-98	84.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1	[more]
A0A6J1JIN6	6.0e-96	82.86	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1D4V0	1.0e-95	84.29	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1EIM6	1.0e-95	82.38	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CmUC02G033070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	1.1e-78	74.73	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	4.9e-58	58.70	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	6.6e-55	50.72	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	6.6e-55	50.72	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	6.6e-55	50.72	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 10..62 e-value: 5.3E-10 score: 49.2 coord: 105..168 e-value: 1.3E-11 score: 54.6
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 11..65 e-value: 2.1E-9 score: 37.4 coord: 106..172 e-value: 1.1E-10 score: 41.6
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 11..45
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 9..69 score: 13.1671
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 104..175 score: 12.1573
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 5..75 e-value: 5.0E-19 score: 70.3
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 99..179 e-value: 9.4E-17 score: 62.9
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..196
None	No IPR available	PANTHER	PTHR24206:SF35	LIM DOMAIN-CONTAINING PROTEIN WLIM1	coord: 1..196
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 106..177 e-value: 2.88878E-36 score: 119.497
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 7..69 e-value: 1.0313E-36 score: 121.033
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 37..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 143..182
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 98..142
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 4..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G033070.1	CmUC02G033070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding