CmUC02G032010 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G032010
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	presequence protease 1, chloroplastic/mitochondrial-like
Location	CmU531Chr02: 6040692 .. 6041411 (+)
RNA-Seq Expression	CmUC02G032010
Synteny	CmUC02G032010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAACATCTCTCCTAACAGCTTGAAGGACTTCAAGAACTTCGCCGATGCACTCGAGGCAGTTAGAAACAAAGGAGTGGTAGTTTCAGTTGCATCTCCCGAAGACGTCGAAACTGCACACAGCGAACGCCCAGGTTTTTTCCAAGTGAAGAAAGCCCTCTAAGATGCGACCCTCCAAGCTCCCATTGCAGCACCATCTCCACTTCCAAAAACCAAAGAGAAGAGGAACAAAACAGATTCCAGAGAAAGAAAGAAAAAGAAGAATAAAAAAAAAAAAAAGGTAACTAGCATTATTGATTCATTTACCCATTACTGTTATACCATGAACAAAAACATTGCATTGTTTCAGAAAAATTCATTAGGAGACAAAAGAAAGTTAATATTTGAGCAGCGGGAAATGATTGTTGTGTACGGAAACATGGGGATTTGATTGATAGTTGATAAAAAGGGGCTTTTCTACTCTTAAATGCTGTTATCAGTGGTGTGTGTTCATTGATAAATATGAACAGAAGGAATGGTGATGTATTTAATTCTTGCGTCTCCTCTATTCACTTGCTCTCAATTTTCTTATCAAGTTTTGTTGTTCTGACTTTCGCCCCCGTTTCAATTTAATAAAAGAAGCATATTTATTGTTTATTTTCAAGTACATCTGACTTGCTTTTTATTTTATTTAGGTGTAATTATAACTCTAGTATCTGTTTCACTTGTACAGTCATGA

mRNA sequence

ATGGTAAACATCTCTCCTAACAGCTTGAAGGACTTCAAGAACTTCGCCGATGCACTCGAGGCAGTTAGAAACAAAGGAGTGGTAGTTTCAGTTGCATCTCCCGAAGACGTCGAAACTGCACACAGCGAACGCCCAGGTGTAATTATAACTCTAGTATCTGTTTCACTTGTACAGTCATGA

Coding sequence (CDS)

ATGGTAAACATCTCTCCTAACAGCTTGAAGGACTTCAAGAACTTCGCCGATGCACTCGAGGCAGTTAGAAACAAAGGAGTGGTAGTTTCAGTTGCATCTCCCGAAGACGTCGAAACTGCACACAGCGAACGCCCAGGTGTAATTATAACTCTAGTATCTGTTTCACTTGTACAGTCATGA

Protein sequence

MVNISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPGVIITLVSVSLVQS

Homology

[Close]

BLAST of CmUC02G032010 vs. NCBI nr
Match: TYK06741.1 (presequence protease 1 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 8.3e-13
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 3    NISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            ++S NSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG
Sbjct: 1063 HLSLNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 1106

[Close]

BLAST of CmUC02G032010 vs. NCBI nr
Match: KAA0031289.1 (presequence protease 1 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 8.3e-13
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 3    NISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            ++S NSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG
Sbjct: 1082 HLSLNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 1125

[Close]

BLAST of CmUC02G032010 vs. NCBI nr
Match: XP_008454934.1 (PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 9.2e-12
Identity = 40/43 (93.02%), Postives = 40/43 (93.02%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            I   SLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG
Sbjct: 1034 ILSTSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 1076

[Close]

BLAST of CmUC02G032010 vs. NCBI nr
Match: XP_031744654.1 (presequence protease 1, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-11
Identity = 39/43 (90.70%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            I   SLKDFKNFADALEAVRNKGVVVSVASPEDVETAH ERPG
Sbjct: 1031 ILSTSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHGERPG 1073

[Close]

BLAST of CmUC02G032010 vs. NCBI nr
Match: XP_004136986.1 (presequence protease 1, chloroplastic/mitochondrial isoform X1 [Cucumis sativus] >KGN43941.1 hypothetical protein Csa_017108 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-11
Identity = 39/43 (90.70%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            I   SLKDFKNFADALEAVRNKGVVVSVASPEDVETAH ERPG
Sbjct: 1034 ILSTSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHGERPG 1076

[Close]

BLAST of CmUC02G032010 vs. ExPASy Swiss-Prot
Match: Q9LJL3 (Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PREP1 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 2.7e-06
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK+FA A++ VR+KGV V+VAS ED++ A++ER
Sbjct: 1030 ILTTSLKDFKDFAQAIDVVRDKGVAVAVASAEDIDAANNER 1070

[Close]

BLAST of CmUC02G032010 vs. ExPASy Swiss-Prot
Match: Q8VY06 (Presequence protease 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PREP2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-05
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK FA+A+++V +KGV V+VAS ED++ A+ ER
Sbjct: 1029 ILSTSLKDFKEFAEAIDSVSDKGVAVAVASQEDIDAANRER 1069

[Close]

BLAST of CmUC02G032010 vs. ExPASy TrEMBL
Match: A0A5A7SPP0 (Presequence protease 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00420 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.0e-13
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 3    NISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            ++S NSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG
Sbjct: 1082 HLSLNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 1125

[Close]

BLAST of CmUC02G032010 vs. ExPASy TrEMBL
Match: A0A5D3C4B1 (Presequence protease 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00420 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.0e-13
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 3    NISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            ++S NSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG
Sbjct: 1063 HLSLNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 1106

[Close]

BLAST of CmUC02G032010 vs. ExPASy TrEMBL
Match: A0A1S3BZ86 (presequence protease 1, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495227 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-12
Identity = 40/43 (93.02%), Postives = 40/43 (93.02%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            I   SLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG
Sbjct: 1034 ILSTSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 1076

[Close]

BLAST of CmUC02G032010 vs. ExPASy TrEMBL
Match: A0A0A0K809 (M16C_associated domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073760 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 39/43 (90.70%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            I   SLKDFKNFADALEAVRNKGVVVSVASPEDVETAH ERPG
Sbjct: 1034 ILSTSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHGERPG 1076

[Close]

BLAST of CmUC02G032010 vs. ExPASy TrEMBL
Match: A0A6J1GL31 (presequence protease 1, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455359 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 39/43 (90.70%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSERPG 47
            I   SLKDFKNFADALEAVRNKGVVVSVASPEDVE AHSERPG
Sbjct: 1028 ILSTSLKDFKNFADALEAVRNKGVVVSVASPEDVEAAHSERPG 1070

[Close]

BLAST of CmUC02G032010 vs. TAIR 10
Match: AT3G19170.1 (presequence protease 1 )

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK+FA A++ VR+KGV V+VAS ED++ A++ER
Sbjct: 1030 ILTTSLKDFKDFAQAIDVVRDKGVAVAVASAEDIDAANNER 1070

[Close]

BLAST of CmUC02G032010 vs. TAIR 10
Match: AT3G19170.2 (presequence protease 1 )

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK+FA A++ VR+KGV V+VAS ED++ A++ER
Sbjct: 1019 ILTTSLKDFKDFAQAIDVVRDKGVAVAVASAEDIDAANNER 1059

[Close]

BLAST of CmUC02G032010 vs. TAIR 10
Match: AT1G49630.1 (presequence protease 2 )

HSP 1 Score: 49.7 bits (117), Expect = 9.5e-07
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK FA+A+++V +KGV V+VAS ED++ A+ ER
Sbjct: 1029 ILSTSLKDFKEFAEAIDSVSDKGVAVAVASQEDIDAANRER 1069

[Close]

BLAST of CmUC02G032010 vs. TAIR 10
Match: AT1G49630.3 (presequence protease 2 )

HSP 1 Score: 49.7 bits (117), Expect = 9.5e-07
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK FA+A+++V +KGV V+VAS ED++ A+ ER
Sbjct: 1029 ILSTSLKDFKEFAEAIDSVSDKGVAVAVASQEDIDAANRER 1069

[Close]

BLAST of CmUC02G032010 vs. TAIR 10
Match: AT1G49630.2 (presequence protease 2 )

HSP 1 Score: 49.7 bits (117), Expect = 9.5e-07
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 4    ISPNSLKDFKNFADALEAVRNKGVVVSVASPEDVETAHSER 45
            I   SLKDFK FA+A+++V +KGV V+VAS ED++ A+ ER
Sbjct: 1029 ILSTSLKDFKEFAEAIDSVSDKGVAVAVASQEDIDAANRER 1069

The following BLAST results are available for this feature:

BLAST of CmUC02G032010 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06741.1	8.3e-13	93.18	presequence protease 1 [Cucumis melo var. makuwa]	[more]
KAA0031289.1	8.3e-13	93.18	presequence protease 1 [Cucumis melo var. makuwa]	[more]
XP_008454934.1	9.2e-12	93.02	PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Cucumis mel...	[more]
XP_031744654.1	2.7e-11	90.70	presequence protease 1, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]	[more]
XP_004136986.1	2.7e-11	90.70	presequence protease 1, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]...	[more]

BLAST of CmUC02G032010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJL3	2.7e-06	58.54	Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
Q8VY06	1.3e-05	56.10	Presequence protease 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CmUC02G032010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPP0	4.0e-13	93.18	Presequence protease 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5D3C4B1	4.0e-13	93.18	Presequence protease 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BZ86	4.5e-12	93.02	presequence protease 1, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656...	[more]
A0A0A0K809	1.3e-11	90.70	M16C_associated domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G07...	[more]
A0A6J1GL31	1.7e-11	90.70	presequence protease 1, chloroplastic/mitochondrial-like OS=Cucurbita moschata O...	[more]

BLAST of CmUC02G032010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19170.1	1.9e-07	58.54	presequence protease 1	[more]
AT3G19170.2	1.9e-07	58.54	presequence protease 1	[more]
AT1G49630.1	9.5e-07	56.10	presequence protease 2	[more]
AT1G49630.3	9.5e-07	56.10	presequence protease 2	[more]
AT1G49630.2	9.5e-07	56.10	presequence protease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.830.10		coord: 3..51 e-value: 1.7E-5 score: 26.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G032010.1	CmUC02G032010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016485	protein processing
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004222	metalloendopeptidase activity