CmUC02G031660 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G031660
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein MEI2-like 1
LocationCmU531Chr02: 5661329 .. 5663018 (-)
RNA-Seq ExpressionCmUC02G031660
SyntenyCmUC02G031660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAATGACCAAAACGATGACCTCAGAAGGTATACCCTTAGACGGACAAAAACAAGCATAACTGTGTATTACTCACATACATATTCATGAAATCATCTCTAAACAACCCAGAAAATAGAGGTAAATTCAAATTACCAAAAGAAAAAATGTTCAACGAACTGCCAGAGCTTCCCAATGACCAATCCTTTTTTTCCTTTTTTGAGTTTGGGCAGTTGGGCAGGGACGTAGTCCATAGGGCTACCCTTTCCATATATAATCATAACTTCAGAAAAATGATACAGCAGACAACATAAAAAAGAACATAGTTGCAGGTTATCCACGTCAGCATAAGCATTCTCTAGCTAATCTCGAACGGGGTAATAGAGAGTTCTGCACTAAAGCTAGGGTCTCCCTGGCGTAATGAACTAACCAATTGAAATCCTCCTCCTAACGGGTATGGTATAGCAACTTATTCTCTTCTCTCAATCCAAATGAGTCTACTCCGTTCTCAATTGGCCACAAACTAAACACGCTTCTAGGATAAAATATAGGTTAAATTGCAAATTTGGTCCCTATAAATTTAGAGAAGGTTAAAATTTAGTCCTCTTGATAAAACTTTCGTAAATAGTAGTCCTTACCCTAAGGATTATTTATGAGTATGTTATCAAACCATACGACCATTTATGAGCAAACCACTAGGACCAAAATTTAACTTTTAAAACGGACTAAATTTTAACTTTCTCCAAGGGACCAAATTTATAATTTAACCATATATTATTGTGTGCAGTTTAGATTCAATCAGAGCTACTTCATCTTTCTACCTTCTAGTCAGAGAAGTTTACCCGAGAGTAAAAGACTGAAGCCTTAAATATGGTGTATCAACAATGACCAAAAAGATTTCTTTACATAGTAAATCCTTTAAAACTTGATGAGCACAAACAAACACAATAGCTTAATGCTTTCAGAAAGAGTATTCAGTTTCACAAACTTATCTCTGAACAATTTATCACAGGGAAGAGGAAACAACCCAATTGGACATTTTATCACGCTAAAGCTAGGCCTACCCAGGGTTCTAAACTGCTTACGTATATGAAACTAAGCTATATAACTAACGAAGTGAAACCATCCCCCTGAGGGATGGAGGGGAAGCAAGATATTCCAAATTCAAATAAATTCCAGATTCAGACTCCACTGTTCTCCCATCCACACAGCGAATAGTAAATACGGAAGTAGGAACAAGGTAACCTAAAAGGAACTAACGAGAGCATGTTAAAAAAAACAAAAAAAAAAAGGAAAAAAATGATTGCATACGAACATTCCGGTGATAATAAACAAATTCGAAGTTTCGATCGGTTAATAACCTGAATTGTTAAGCGACCACGATAGGCTGTTGTTTAGGGGGCTCAATTCCTTTGTTATTCTTCTGATTAGAGTCTCCAAGAAAATCTTCCATGTTGTAGATGACCGTGATGTAAAGAGAGCAGCTAGGGCACCGAGCAATCTCTTCGCCGAGCTTAAGATCCTCCTTGGTGATCTGGAACAAGTCGCCGCAGGGGCATGGGTATGTGAAGGCCTGCAGTTCCTCGTTCCACTCCATGTCTTCAATCTCTACGTCGTCGTACGACATCGTTGCTCCGGTGGATTCGGCCGATTCAGCGGCGACGGCGTGTCAGCAACCGCCGAGTTCGGAGGTAACGAAGAAGATTGA

mRNA sequence

ATGAGCAATGACCAAAACGATGACCTCAGAAGAGTCTCCAAGAAAATCTTCCATGTTGTAGATGACCGTGATGTAAAGAGAGCAGCTAGGGCACCGAGCAATCTCTTCGCCGAGCTTAAGATCCTCCTTGGTGATCTGGAACAAGTCGCCGCAGGGGCATGGGTATGTGAAGGCCTGCAGTTCCTCGTTCCACTCCATGTCTTCAATCTCTACGTCGTCGTACGACATCGTTGCTCCGGTGGATTCGGCCGATTCAGCGGCGACGGCGTGTCAGCAACCGCCGAGTTCGGAGGTAACGAAGAAGATTGA

Coding sequence (CDS)

ATGAGCAATGACCAAAACGATGACCTCAGAAGAGTCTCCAAGAAAATCTTCCATGTTGTAGATGACCGTGATGTAAAGAGAGCAGCTAGGGCACCGAGCAATCTCTTCGCCGAGCTTAAGATCCTCCTTGGTGATCTGGAACAAGTCGCCGCAGGGGCATGGGTATGTGAAGGCCTGCAGTTCCTCGTTCCACTCCATGTCTTCAATCTCTACGTCGTCGTACGACATCGTTGCTCCGGTGGATTCGGCCGATTCAGCGGCGACGGCGTGTCAGCAACCGCCGAGTTCGGAGGTAACGAAGAAGATTGA

Protein sequence

MSNDQNDDLRRVSKKIFHVVDDRDVKRAARAPSNLFAELKILLGDLEQVAAGAWVCEGLQFLVPLHVFNLYVVVRHRCSGGFGRFSGDGVSATAEFGGNEED
Homology
[Close]
BLAST of CmUC02G031660 vs. NCBI nr
Match: KAG2397849.1 (Serine/threonine-protein kinase [Vigna angularis])

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 12  VSKKIFHVVDDRDVKRAARAPSNLFAELKILLGDLEQVAAGAWVCEGLQFLVPLHVFNLY 71
           + ++IF VVDD D++RAARAPSNLF E ++ L DLE++ A A V  GLQ LVPLHV +L+
Sbjct: 320 IGEEIFDVVDDGDIERAARAPSNLFTEFEVFLRDLEEIPARARVRVGLQLLVPLHVLDLH 379

Query: 72  VVVRHRCSG 81
           +VVRH   G
Sbjct: 380 LVVRHLMQG 388

[Close]
BLAST of CmUC02G031660 vs. NCBI nr
Match: KAF5951182.1 (hypothetical protein HYC85_009126 [Camellia sinensis])

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-12
Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 12  VSKKIFHVVDDRDVKRAARAPSNLFAELKILLGDLEQVAAGAWVCEGLQFLVPLHVFNLY 71
           +  +IF VVDD DV+R ARA S+LFA+L++  GDLEQV+AG  VC  L+ +VP HVF+L+
Sbjct: 46  IGDEIFDVVDDGDVERTARASSDLFADLEVFFGDLEQVSAGTRVCVRLKLVVPFHVFDLH 105

Query: 72  VVVRH 77
           +VVRH
Sbjct: 106 IVVRH 110

[Close]
BLAST of CmUC02G031660 vs. NCBI nr
Match: EXC05163.1 (Protein MEI2-like 1 [Morus notabilis])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 9    LRRVSKKIFHVVDDRDVKRAARAPSNLFAELKILLGDLEQVAAGAWVCEGLQFLVPLHVF 68
            L R+S KI  +++D DVKR A A S+L AE +I LGDL+QV+A  WV   L+ LVPLHVF
Sbjct: 1045 LVRISGKILEIINDSDVKRTAWATSDLLAEFEIFLGDLKQVSAWTWVRIRLELLVPLHVF 1104

Query: 69   NLYVVVRHR 78
            +L+VVVRHR
Sbjct: 1105 DLHVVVRHR 1113

[Close]
BLAST of CmUC02G031660 vs. ExPASy TrEMBL
Match: A0A7J7HE47 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_009126 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.1e-13
Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 12  VSKKIFHVVDDRDVKRAARAPSNLFAELKILLGDLEQVAAGAWVCEGLQFLVPLHVFNLY 71
           +  +IF VVDD DV+R ARA S+LFA+L++  GDLEQV+AG  VC  L+ +VP HVF+L+
Sbjct: 46  IGDEIFDVVDDGDVERTARASSDLFADLEVFFGDLEQVSAGTRVCVRLKLVVPFHVFDLH 105

Query: 72  VVVRH 77
           +VVRH
Sbjct: 106 IVVRH 110

[Close]
BLAST of CmUC02G031660 vs. ExPASy TrEMBL
Match: W9RRN7 (Protein MEI2-like 1 OS=Morus notabilis OX=981085 GN=L484_003969 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 9    LRRVSKKIFHVVDDRDVKRAARAPSNLFAELKILLGDLEQVAAGAWVCEGLQFLVPLHVF 68
            L R+S KI  +++D DVKR A A S+L AE +I LGDL+QV+A  WV   L+ LVPLHVF
Sbjct: 1045 LVRISGKILEIINDSDVKRTAWATSDLLAEFEIFLGDLKQVSAWTWVRIRLELLVPLHVF 1104

Query: 69   NLYVVVRHR 78
            +L+VVVRHR
Sbjct: 1105 DLHVVVRHR 1113

The following BLAST results are available for this feature:
BLAST of CmUC02G031660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG2397849.11.4e-1257.97Serine/threonine-protein kinase [Vigna angularis][more]
KAF5951182.11.9e-1258.46hypothetical protein HYC85_009126 [Camellia sinensis][more]
EXC05163.12.5e-1259.42Protein MEI2-like 1 [Morus notabilis][more]
BLAST of CmUC02G031660 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC02G031660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J7HE479.1e-1358.46Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_009126 PE=4 SV=1[more]
W9RRN71.2e-1259.42Protein MEI2-like 1 OS=Morus notabilis OX=981085 GN=L484_003969 PE=4 SV=1[more]
BLAST of CmUC02G031660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G031660.1CmUC02G031660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding