CmUC02G031640 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G031640
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionCystatin domain-containing protein
LocationCmU531Chr02: 5634772 .. 5635107 (-)
RNA-Seq ExpressionCmUC02G031640
SyntenyCmUC02G031640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTGTGCCAAAAGATGACCATTTAAAGCCAATTGTGGATATTCATGAAGAATTTGTGCAAAACGTTGGAAGGTTGGCAGTGGATCATTATAACAACACAACGAAAAGAGAAACTAAGGTGAAGTTCAAGCGCGTGGTGAATGGTCTAAGTGGGGGCGTTATTTTCTCATTCTCTGGTGTGTTATTTGAACTAGTGGTAGAGGTTGAAGAAGATGAATTTAATAGTTCATATATTGCAAAAGTGAAGGCCCGTCAGTTTTCTCTACGTGAATTCGTCCCTATAAGCTATGAATTCATATCTTTTGAGCCTGTTCTCACGTACAAGAAGTAA

mRNA sequence

ATGAGTTGTGTGCCAAAAGATGACCATTTAAAGCCAATTGTGGATATTCATGAAGAATTTGTGCAAAACGTTGGAAGGTTGGCAGTGGATCATTATAACAACACAACGAAAAGAGAAACTAAGGTGAAGTTCAAGCGCGTGGTGAATGGTCTAAGTGGGGGCGTTATTTTCTCATTCTCTGGTGTGTTATTTGAACTAGTGGTAGAGGTTGAAGAAGATGAATTTAATAGTTCATATATTGCAAAAGTGAAGGCCCGTCAGTTTTCTCTACGTGAATTCGTCCCTATAAGCTATGAATTCATATCTTTTGAGCCTGTTCTCACGTACAAGAAGTAA

Coding sequence (CDS)

ATGAGTTGTGTGCCAAAAGATGACCATTTAAAGCCAATTGTGGATATTCATGAAGAATTTGTGCAAAACGTTGGAAGGTTGGCAGTGGATCATTATAACAACACAACGAAAAGAGAAACTAAGGTGAAGTTCAAGCGCGTGGTGAATGGTCTAAGTGGGGGCGTTATTTTCTCATTCTCTGGTGTGTTATTTGAACTAGTGGTAGAGGTTGAAGAAGATGAATTTAATAGTTCATATATTGCAAAAGTGAAGGCCCGTCAGTTTTCTCTACGTGAATTCGTCCCTATAAGCTATGAATTCATATCTTTTGAGCCTGTTCTCACGTACAAGAAGTAA

Protein sequence

MSCVPKDDHLKPIVDIHEEFVQNVGRLAVDHYNNTTKRETKVKFKRVVNGLSGGVIFSFSGVLFELVVEVEEDEFNSSYIAKVKARQFSLREFVPISYEFISFEPVLTYKK
Homology
BLAST of CmUC02G031640 vs. NCBI nr
Match: KAE8649716.1 (hypothetical protein Csa_012476 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06
Identity = 43/105 (40.95%), Postives = 62/105 (59.05%), Query Frame = 0

Query: 11  KPIVDIHEEFVQNVGRLAVDHYNNTTKRETKVKFKRVVNGLSGGVIFSFS---GVLFELV 70
           +PI DI++  VQ +G L VD +N  T     +KF RVVNGL  G +  FS   G ++ELV
Sbjct: 8   EPIKDINDPQVQEIGNLTVDDHNKKTGE--NLKFVRVVNGLFAGFVDPFSPLGGTVYELV 67

Query: 71  VE-VEEDEFNSSYIAKVKARQFSLREFVPISYEFISFEPVLTYKK 112
           +E +   + N +Y  KV A   ++R  + + Y F SFEPVL Y++
Sbjct: 68  LEAINAGKINWTYKVKVSA-STTIRP-LGVVYNFQSFEPVLQYEE 108

BLAST of CmUC02G031640 vs. NCBI nr
Match: KGN54823.1 (hypothetical protein Csa_012607 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-05
Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 0

Query: 1   MSCVPKDDHLKPIVDIHEEFVQNVGRLAVDHYNNTTKRETKVKFKRVVNGLSGGVIFS-- 60
           MS       LKPI+DI++  VQ +G LAV++  +    E K+KF RVVNGL         
Sbjct: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGE-KLKFVRVVNGLKSDKYIGPG 60

Query: 61  -FSGVLFELVVEVE-EDEFNSSYIAKVKARQFSLREFVPISYEFISFEPVLTYKK 112
               +L+ LV+E +  +E N +Y  K++     L     I + F+SFEPVL Y K
Sbjct: 61  FTEVILYHLVLEAKTNEEINWTYATKLEEVSGGL-----IRHVFLSFEPVLPYYK 109

BLAST of CmUC02G031640 vs. ExPASy TrEMBL
Match: A0A0A0KZ98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 0

Query: 1   MSCVPKDDHLKPIVDIHEEFVQNVGRLAVDHYNNTTKRETKVKFKRVVNGLSGGVIFS-- 60
           MS       LKPI+DI++  VQ +G LAV++  +    E K+KF RVVNGL         
Sbjct: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGE-KLKFVRVVNGLKSDKYIGPG 60

Query: 61  -FSGVLFELVVEVE-EDEFNSSYIAKVKARQFSLREFVPISYEFISFEPVLTYKK 112
               +L+ LV+E +  +E N +Y  K++     L     I + F+SFEPVL Y K
Sbjct: 61  FTEVILYHLVLEAKTNEEINWTYATKLEEVSGGL-----IRHVFLSFEPVLPYYK 109

BLAST of CmUC02G031640 vs. ExPASy TrEMBL
Match: A0A0A0L191 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-05
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0

Query: 10  LKPIVDIHEEFVQNVGRLAVDHYNNTTKRETKVKFKRVVNGLSGGVIFS---FSGVLFEL 69
           LKPI+DI++  VQ +G+LAV+ +++    E K+KF RVVNGL             +L+ L
Sbjct: 10  LKPIIDINDPHVQIIGKLAVEDHDSHNPGE-KLKFVRVVNGLKSDKYIGPGFTEVILYHL 69

Query: 70  VVEVE-EDEFNSSYIAKVKARQFSLREFVPISYEFISFEPVLTYKK 112
           V+E +  +E N +Y  K++     +     I + F+SFEPVL Y K
Sbjct: 70  VLEAKTNEEINWTYATKLE----KVYSGCLIRHVFLSFEPVLPYNK 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8649716.12.9e-0640.95hypothetical protein Csa_012476 [Cucumis sativus][more]
KGN54823.13.2e-0537.39hypothetical protein Csa_012607 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KZ981.5e-0537.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1[more]
A0A0A0L1912.0e-0537.74Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 10..106
e-value: 6.2E-10
score: 40.9
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 18..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G031640.1CmUC02G031640.1mRNA