CmUC02G031080 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G031080
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionprotein RADIALIS-like 1
LocationCmU531Chr02: 4945855 .. 4947032 (-)
RNA-Seq ExpressionCmUC02G031080
SyntenyCmUC02G031080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCAAAACTCTACGAGATCGAGTCGTTGATCGCTGAGGAAATGAGGTAATATATGTTAAATCACCATTGAACTTAAAAGTTTTTTTTTTTTTTTGTTTAATTGATGAACTGAATTCAAAAACTTATGTTTTATTCGTTATAATTAATTTAATATTTATCAATAATATCTGAGTACTCTTCATCACTTATGGGGTTTAGGAATATTAATAATATTAATTATGGAGAGAAAATGACATTATAAGAATTTTTGGACAAAGACATCTTATACTTCAATATCATGTTAAATTACTACTAAGCTTAAAAATTCAAAATATGGTAACAAAGTGTATATATATATAAACTTTGGGTTATAGTAAAATACATATAACACTATTGTTGCTTTTAAGTTTTGACTCTCTTTCTATAAATATATATTTTTGCAAGGAATAACTTCTACAAATATATATCTTCATCGAGCTTATAAAATGAAGTAAATTTATTCTAATATAAAAGATTTGTTGTTTTAGCTAAATGATAATTTAACATGGTATAAGAGTAGACATAGTGAAAAGCTAACCATTTAAAATCACTTTATTATTTTTTGTTTTTTTTTATTAGAGTGGTATGCAAAATAAATGGATCTAAATTAAAGAATATTTATGAAGGTCAAGTTATAATGTGAACAAAGAAAGAGAATATTATGCTAACGTAGTAATATCATGAACTAAATATTTGATTTTTTCTTTTTCTCAGGATGTGAGTAACATTCGTAGTTGAAATGAGCCAGCTCATGCAGTATGGAGGAATAAAGGAATGAAGGAAGAAGAACCATTTGCTCTCTATTGTACTACCCTTTAAATGTAACTGTAAAGTAGAATTATTGAGAGAATAATATTTATTGGTGTTTTCTTTTTTGAAAAAATGTGAACCATTTTCAATGTATTCAGTTCATTAAATACAACTAGATTAATCCATCTATATA

mRNA sequence

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCAAAACTCTACGAGATCGAGTCGATGTGAGTAACATTCGTAGTTGAAATGAGCCAGCTCATGCAGTATGGAGGAATAAAGGAATGAAGGAAGAAGAACCATTTGCTCTCTATTGTACTACCCTTTAAATGTAACTGTAAAGTAGAATTATTGAGAGAATAATATTTATTGGTGTTTTCTTTTTTGAAAAAATGTGAACCATTTTCAATGTATTCAGTTCATTAAATACAACTAGATTAATCCATCTATATA

Coding sequence (CDS)

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCAAAACTCTACGAGATCGAGTCGATGTGAGTAA

Protein sequence

MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYQNSTRSSRCE
Homology
[Close]
BLAST of CmUC02G031080 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 69/81 (85.19%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS+ WT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+ED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIE+G+IPFPY+NSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]
BLAST of CmUC02G031080 vs. NCBI nr
Match: XP_022952660.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-like 1 [Cucurbita moschata] >XP_023554744.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVKD 60

Query: 61 VKHIESGEIPFPYQNSTR 79
          VKHIESGEI FPY++STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]
BLAST of CmUC02G031080 vs. NCBI nr
Match: XP_022972544.1 (protein RADIALIS-like 1 [Cucurbita maxima] >XP_022972545.1 protein RADIALIS-like 1 [Cucurbita maxima])

HSP 1 Score: 142.5 bits (358), Expect = 1.6e-30
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTP+RW+NVAKAIGGKTE+EVKRHYQLLV D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPDRWVNVAKAIGGKTEDEVKRHYQLLVND 60

Query: 61 VKHIESGEIPFPYQNSTR 79
          VKHIESGEI FPY++STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]
BLAST of CmUC02G031080 vs. NCBI nr
Match: XP_022952273.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG7011709.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYQNST 78
          VKHIESG +PFPY+NS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]
BLAST of CmUC02G031080 vs. NCBI nr
Match: KAG6572041.1 (Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYQNST 78
          VKHIESG +PFPY+NS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]
BLAST of CmUC02G031080 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-23
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 3  SMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++GS +WT  +NKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGEIPFP-YQNSTRSS 81
           IE+G +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]
BLAST of CmUC02G031080 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.6e-23
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0 

Query: 2  ASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  S +WT  +NKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGEIPFP 73
            IE+G +PFP
Sbjct: 64 NSIENGHVPFP 74

[Close]
BLAST of CmUC02G031080 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-21
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS    G   W+  ENKAFE+ALAVYD+DTP+RW NVA+A+ G+T EEVK+HY++LVED
Sbjct: 1  MASTRGSG-RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 60

Query: 61 VKHIESGEIPFPYQNST 78
          +K+IESG++PFP   +T
Sbjct: 61 IKYIESGKVPFPNYRTT 76

[Close]
BLAST of CmUC02G031080 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.3e-21
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   S++WT  ENK FE+ALA YDQDTP+RW NVA+A+GGK+ EEV+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKHIESGEIPFPYQNS 77
          V  IESG  P P   S
Sbjct: 61 VNDIESGRYPHPNYRS 76

[Close]
BLAST of CmUC02G031080 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.3e-21
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YQNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]
BLAST of CmUC02G031080 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIESG+IPFPY+ STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]
BLAST of CmUC02G031080 vs. ExPASy TrEMBL
Match: A0A1S3BGF0 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 69/81 (85.19%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS+ WT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+ED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIE+G+IPFPY+NSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]
BLAST of CmUC02G031080 vs. ExPASy TrEMBL
Match: A0A6J1GKV1 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVKD 60

Query: 61 VKHIESGEIPFPYQNSTR 79
          VKHIESGEI FPY++STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]
BLAST of CmUC02G031080 vs. ExPASy TrEMBL
Match: A0A6J1I8Y0 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471083 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.9e-31
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTP+RW+NVAKAIGGKTE+EVKRHYQLLV D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPDRWVNVAKAIGGKTEDEVKRHYQLLVND 60

Query: 61 VKHIESGEIPFPYQNSTR 79
          VKHIESGEI FPY++STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]
BLAST of CmUC02G031080 vs. ExPASy TrEMBL
Match: A0A6J1GK35 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYQNST 78
          VKHIESG +PFPY+NS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]
BLAST of CmUC02G031080 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-24
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 3  SMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++GS +WT  +NKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGEIPFP-YQNSTRSS 81
           IE+G +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]
BLAST of CmUC02G031080 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 107.5 bits (267), Expect = 5.4e-24
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0 

Query: 2  ASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  S +WT  +NKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGEIPFP 73
            IE+G +PFP
Sbjct: 64 NSIENGHVPFP 74

[Close]
BLAST of CmUC02G031080 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 100.5 bits (249), Expect = 6.6e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YQNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]
BLAST of CmUC02G031080 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 100.5 bits (249), Expect = 6.6e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YQNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]
BLAST of CmUC02G031080 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-21
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   SS+WT  +NK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP 73
          + +IE   +P P
Sbjct: 61 LMNIEQDLVPLP 72

The following BLAST results are available for this feature:
BLAST of CmUC02G031080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447026.12.3e-3285.19PREDICTED: protein RADIALIS-like 1 [Cucumis melo][more]
XP_022952660.15.6e-3188.46protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-li... [more]
XP_022972544.11.6e-3087.18protein RADIALIS-like 1 [Cucurbita maxima] >XP_022972545.1 protein RADIALIS-like... [more]
XP_022952273.13.6e-3084.42protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-li... [more]
KAG6572041.13.6e-3084.42Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmUC02G031080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIJ53.4e-2363.29Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1[more]
F4JVB87.6e-2366.20Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1[more]
Q58FS31.9e-2161.04Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1[more]
Q6NNN09.3e-2161.84Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1[more]
Q1A1739.3e-2160.98Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1[more]
BLAST of CmUC02G031080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3K01.3e-3388.89SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S... [more]
A0A1S3BGF01.1e-3285.19protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1[more]
A0A6J1GKV12.7e-3188.46protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1[more]
A0A6J1I8Y07.9e-3187.18protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471083 PE=4 SV=1[more]
A0A6J1GK351.8e-3084.42protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1[more]
BLAST of CmUC02G031080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21650.12.4e-2463.29Homeodomain-like superfamily protein [more]
AT4G39250.15.4e-2466.20RAD-like 1 [more]
AT1G75250.16.6e-2260.98RAD-like 6 [more]
AT1G75250.26.6e-2260.98RAD-like 6 [more]
AT1G19510.13.3e-2162.50RAD-like 5 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 8..60
e-value: 1.0E-8
score: 45.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 10..58
score: 6.330165
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 11..58
e-value: 3.95665E-8
score: 42.9478
NoneNo IPR availableGENE3D1.10.10.60coord: 3..71
e-value: 2.3E-23
score: 83.8
NoneNo IPR availablePANTHERPTHR43952:SF68MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 2..79
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 10..56
e-value: 3.5E-7
score: 30.3
IPR044636Transcription factor RADIALIS-likePANTHERPTHR43952MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 2..79
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G031080.1CmUC02G031080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity