CmUC02G031060 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G031060
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein RADIALIS-like 1
Location	CmU531Chr02: 4923629 .. 4923868 (-)
RNA-Seq Expression	CmUC02G031060
Synteny	CmUC02G031060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATTTCTGCTTTTGGACCAAGCACTCCATGGACTACAAAGCAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGCGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAAGATGTTAAGCATATTGAGTCGGGTGAAATTCCTTTTCCCTATGGAAGCTCTACAAGATAG

mRNA sequence

ATGGCTTCCATTTCTGCTTTTGGACCAAGCACTCCATGGACTACAAAGCAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGCGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAAGATGTTAAGCATATTGAGTCGGGTGAAATTCCTTTTCCCTATGGAAGCTCTACAAGATAG

Coding sequence (CDS)

ATGGCTTCCATTTCTGCTTTTGGACCAAGCACTCCATGGACTACAAAGCAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGCGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAAGATGTTAAGCATATTGAGTCGGGTGAAATTCCTTTTCCCTATGGAAGCTCTACAAGATAG

Protein sequence

MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYGSSTR

Homology

[Close]

BLAST of CmUC02G031060 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS++A GPSTPWT KQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPY 75
          DVKHIESGEIPFPY
Sbjct: 61 DVKHIESGEIPFPY 74

[Close]

BLAST of CmUC02G031060 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS++A GPST WT  QNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DVKHIESGEIPFPY  STR
Sbjct: 61 DVKHIESGEIPFPYRRSTR 79

[Close]

BLAST of CmUC02G031060 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 6.5e-29
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G +  WT KQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYGSS 78
          DVK IESGE+PFPYG S
Sbjct: 61 DVKQIESGEVPFPYGRS 77

[Close]

BLAST of CmUC02G031060 vs. NCBI nr
Match: XP_022952660.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-like 1 [Cucurbita moschata] >XP_023554744.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 9.4e-28
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G S+ WT ++NKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+
Sbjct: 1  MASMSAHG-SSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVK 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DVKHIESGEI FPY SSTR
Sbjct: 61 DVKHIESGEINFPYRSSTR 78

[Close]

BLAST of CmUC02G031060 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 63/79 (79.75%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G ST WT  +NKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DV HIE+G+IPFPY +STR
Sbjct: 61 DVNHIENGQIPFPYRNSTR 78

[Close]

BLAST of CmUC02G031060 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.2e-23
Identity = 45/69 (65.22%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 5  SAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKH 64
          S  G   PW+ K+NKAFE+ALAVYD+DTP+RW NVA+A+ G+T EEVK+HY++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGEIPFP 74
          IESG++PFP
Sbjct: 63 IESGKVPFP 71

[Close]

BLAST of CmUC02G031060 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.1e-22
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 1  MASISAFGPST-PWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLV 60
          MAS S    S+  WT KQNKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFP 74
          +D+  IE+G +PFP
Sbjct: 61 QDINSIENGHVPFP 74

[Close]

BLAST of CmUC02G031060 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.7e-22
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 3  SISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 62
          S+S++G S  WT KQNKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFP 74
          + IE+G +PFP
Sbjct: 65 ESIENGHVPFP 74

[Close]

BLAST of CmUC02G031060 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-21
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of CmUC02G031060 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-20
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS S+   S+ WT+KQNK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKHIESGEIPFP 74
          D+ +IE   +P P
Sbjct: 61 DLMNIEQDLVPLP 72

[Close]

BLAST of CmUC02G031060 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS++A GPSTPWT KQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPY 75
          DVKHIESGEIPFPY
Sbjct: 61 DVKHIESGEIPFPY 74

[Close]

BLAST of CmUC02G031060 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G +  WT KQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYGSS 78
          DVK IESGE+PFPYG S
Sbjct: 61 DVKQIESGEVPFPYGRS 77

[Close]

BLAST of CmUC02G031060 vs. ExPASy TrEMBL
Match: A0A6J1GKV1 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.5e-28
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G S+ WT ++NKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+
Sbjct: 1  MASMSAHG-SSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVK 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DVKHIESGEI FPY SSTR
Sbjct: 61 DVKHIESGEINFPYRSSTR 78

[Close]

BLAST of CmUC02G031060 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.8e-28
Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G S+ WT  +NKAFEKALA+YD+DTPERWLNVAKAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DV HIESG+IPFPY  STR
Sbjct: 61 DVNHIESGQIPFPYRKSTR 78

[Close]

BLAST of CmUC02G031060 vs. ExPASy TrEMBL
Match: A0A6J1C4J2 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007855 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G    W+  QNKAFE+ALAVYD+DTP+RWLNVA AIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPYGSS 78
          DVKHIESGE+PFPY SS
Sbjct: 61 DVKHIESGEVPFPYRSS 77

[Close]

BLAST of CmUC02G031060 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-23
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 1  MASISAFGPST-PWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLV 60
          MAS S    S+  WT KQNKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFP 74
          +D+  IE+G +PFP
Sbjct: 61 QDINSIENGHVPFP 74

[Close]

BLAST of CmUC02G031060 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 3.3e-23
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 3  SISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 62
          S+S++G S  WT KQNKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFP 74
          + IE+G +PFP
Sbjct: 65 ESIENGHVPFP 74

[Close]

BLAST of CmUC02G031060 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 101.3 bits (251), Expect = 3.7e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of CmUC02G031060 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 101.3 bits (251), Expect = 3.7e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of CmUC02G031060 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS S+   S+ WT+KQNK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKHIESGEIPFP 74
          D+ +IE   +P P
Sbjct: 61 DLMNIEQDLVPLP 72

The following BLAST results are available for this feature:

BLAST of CmUC02G031060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036165.1	6.3e-32	93.24	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]
KAE8645640.1	5.3e-31	87.34	hypothetical protein Csa_020521 [Cucumis sativus]	[more]
XP_022952074.1	6.5e-29	84.42	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li...	[more]
XP_022952660.1	9.4e-28	82.28	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-li...	[more]
XP_008447026.1	2.1e-27	79.75	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]

BLAST of CmUC02G031060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58FS3	4.2e-23	65.22	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
F4JVB8	2.1e-22	67.57	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	4.7e-22	67.61	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q1A173	5.2e-21	69.84	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q8GW75	4.4e-20	63.01	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]

BLAST of CmUC02G031060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3V4	3.0e-32	93.24	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1GKK4	3.1e-29	84.42	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1	[more]
A0A6J1GKV1	4.5e-28	82.28	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1	[more]
A0A0A0K3K0	7.8e-28	81.01	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S...	[more]
A0A6J1C4J2	1.0e-27	80.52	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007855 PE=4 SV=1	[more]

BLAST of CmUC02G031060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	1.5e-23	67.57	RAD-like 1	[more]
AT2G21650.1	3.3e-23	67.61	Homeodomain-like superfamily protein	[more]
AT1G75250.1	3.7e-22	69.84	RAD-like 6	[more]
AT1G75250.2	3.7e-22	69.84	RAD-like 6	[more]
AT1G19510.1	3.1e-21	63.01	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 6.4E-7 score: 39.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 12..59 score: 6.132755
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 1.03679E-6 score: 39.481
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..57 e-value: 1.6E-5 score: 25.0
None	No IPR available	GENE3D	1.10.10.60		coord: 5..72 e-value: 4.7E-23 score: 82.7
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 1..75
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..75
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G031060.1	CmUC02G031060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity